BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4262.p (351 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776779.1| nitrate/sulfonate/bicarbonate ABC transporte... 584 e-165 ref|YP_003776778.1| nitrate/sulfonate/bicarbonate ABC transporte... 444 e-123 ref|YP_004753122.1| nitrate/sulfonate/bicarbonate ABC transporte... 434 e-119 ref|YP_001887794.1| NMT1/THI5 like domain-containing protein [Bu... 412 e-113 ref|YP_003608206.1| NMT1/THI5 like domain protein [Burkholderia ... 407 e-111 >ref|YP_003776779.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ64871.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 353 Score = 584 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 310/327 (94%), Positives = 320/327 (97%) Query: 25 ATAIAACALGLGAPQAHAADKIIIMVGGINKLIYLPPKLAESLGYFKEEGLDVELQSQPA 84 +TAI ACALGL APQA AADKIIIMVGGINKLIYLPPKLAESLGYFKEEGLDVELQSQPA Sbjct: 27 STAITACALGLAAPQARAADKIIIMVGGINKLIYLPPKLAESLGYFKEEGLDVELQSQPA 86 Query: 85 GVDAENELLAGAVQAVVGYYDHSIDLQSKGKEVTSITQLLLVPGGMEMVRADLADSVRSM 144 GVDAENELLAGAVQAVVGYYDHSIDLQSKGKEVTSI QLLLVPGGMEMVRADLADSVRSM Sbjct: 87 GVDAENELLAGAVQAVVGYYDHSIDLQSKGKEVTSIAQLLLVPGGMEMVRADLADSVRSM 146 Query: 145 ADLKGKTLGVTGLGSSSSFLAQYLASRAGLKAGDYSILPVGAGNTLIAAMKQKRVDVAWT 204 ADLKGKTLGVTGLGSSSSF+AQYLA+RAGLKAGDYSILPVGAGNTLIAAMKQKRVDVAWT Sbjct: 147 ADLKGKTLGVTGLGSSSSFIAQYLANRAGLKAGDYSILPVGAGNTLIAAMKQKRVDVAWT 206 Query: 205 TEPTTSILLASGAAKVLVDMSSVEGTKAALGGLYPASSLYVHRSWMVSHKADAQKLARAF 264 TEPTTSILLASGAAKVLVDMSSV+GTKAALGGLYPASSLYVHRSWM SHKA++QKLAR F Sbjct: 207 TEPTTSILLASGAAKVLVDMSSVDGTKAALGGLYPASSLYVHRSWMNSHKAESQKLARVF 266 Query: 265 VKTLKYIQTHSAEEVADKMPKDYYGGNKAIYVQALKASLPMYSPDGKMPAGGPEQVLKVM 324 VKTL+YIQTHSAE++ADKMPKDYYGG+KAIYVQALKASLPMYSPDGKMPAGGPEQVLKVM Sbjct: 267 VKTLRYIQTHSAEDIADKMPKDYYGGSKAIYVQALKASLPMYSPDGKMPAGGPEQVLKVM 326 Query: 325 AGFNPNIKGKNIDLSKTYTNEFVDAVK 351 AGFNPNIKGKNIDLSKTYTNEFVD VK Sbjct: 327 AGFNPNIKGKNIDLSKTYTNEFVDQVK 353 >ref|YP_003776778.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ64870.1| ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 337 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 233/329 (70%), Positives = 272/329 (82%) Query: 23 LGATAIAACALGLGAPQAHAADKIIIMVGGINKLIYLPPKLAESLGYFKEEGLDVELQSQ 82 L + AIA+ L A AA KI IMVGGINK++YLP KLAE LGYFKEEGLDVELQSQ Sbjct: 9 LLSLAIASTVLAGAPAPAWAAAKITIMVGGINKMVYLPAKLAEQLGYFKEEGLDVELQSQ 68 Query: 83 PAGVDAENELLAGAVQAVVGYYDHSIDLQSKGKEVTSITQLLLVPGGMEMVRADLADSVR 142 PAGVDAENELLAGAVQAVVG+YDHSIDLQ+KGKE+T+I L VPG +E+V A + Sbjct: 69 PAGVDAENELLAGAVQAVVGFYDHSIDLQTKGKEITAIVILGQVPGEVELVSTKAAPHFQ 128 Query: 143 SMADLKGKTLGVTGLGSSSSFLAQYLASRAGLKAGDYSILPVGAGNTLIAAMKQKRVDVA 202 SMAD KGKTLGVTGLGSS++FL QYLASR G+ + +S+LPVGA NT IAAMKQ R+D Sbjct: 129 SMADAKGKTLGVTGLGSSTNFLTQYLASRHGITSKQFSVLPVGADNTFIAAMKQGRIDAG 188 Query: 203 WTTEPTTSILLASGAAKVLVDMSSVEGTKAALGGLYPASSLYVHRSWMVSHKADAQKLAR 262 TTEPT S LL +G A+VLVD+ +VEGT ALGGLYPASS+YV RSW+ SHK DAQKLAR Sbjct: 189 MTTEPTASQLLKTGDAQVLVDLRTVEGTVKALGGLYPASSVYVQRSWLNSHKEDAQKLAR 248 Query: 263 AFVKTLKYIQTHSAEEVADKMPKDYYGGNKAIYVQALKASLPMYSPDGKMPAGGPEQVLK 322 AFVKTL++IQTH+AE++ADKMPKDYYG NK +Y+QAL SLPMYS DGKMP GGP+ VL Sbjct: 249 AFVKTLRFIQTHTAEQIADKMPKDYYGNNKPLYIQALTNSLPMYSQDGKMPKGGPQTVLA 308 Query: 323 VMAGFNPNIKGKNIDLSKTYTNEFVDAVK 351 V++GFNPN+KGK++DLSKTYT+EFV+AVK Sbjct: 309 VLSGFNPNVKGKHVDLSKTYTDEFVNAVK 337 >ref|YP_004753122.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic proteins [Collimonas fungivorans Ter331] gb|AEK62299.1| ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Collimonas fungivorans Ter331] Length = 356 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 231/319 (72%), Positives = 264/319 (82%), Gaps = 2/319 (0%) Query: 35 LGAPQAHAAD--KIIIMVGGINKLIYLPPKLAESLGYFKEEGLDVELQSQPAGVDAENEL 92 LGA QA AAD KI IMVGGI K+IYLP KL E LGYFKEEGLDVELQSQPAGVDAENEL Sbjct: 38 LGASQAMAADSGKITIMVGGITKMIYLPAKLTEQLGYFKEEGLDVELQSQPAGVDAENEL 97 Query: 93 LAGAVQAVVGYYDHSIDLQSKGKEVTSITQLLLVPGGMEMVRADLADSVRSMADLKGKTL 152 LAGAVQAVVG+YDHSIDLQSKGKEVT+IT VPG +EMV A +++SMAD+KGKTL Sbjct: 98 LAGAVQAVVGFYDHSIDLQSKGKEVTAITIFGQVPGEVEMVSTKAAATIKSMADVKGKTL 157 Query: 153 GVTGLGSSSSFLAQYLASRAGLKAGDYSILPVGAGNTLIAAMKQKRVDVAWTTEPTTSIL 212 GVTGLGSS++FL QYLA++AG+ + YS+LPVGA NT I A+KQ R+D TTEPT S L Sbjct: 158 GVTGLGSSTNFLTQYLAAKAGITSSQYSVLPVGADNTFIVAIKQGRIDAGMTTEPTVSQL 217 Query: 213 LASGAAKVLVDMSSVEGTKAALGGLYPASSLYVHRSWMVSHKADAQKLARAFVKTLKYIQ 272 L +G A VLVDM +VEGT ALGGLYPASSLYV W+ +HKA+A KLA AFVKTLK+I Sbjct: 218 LKTGEASVLVDMRTVEGTVKALGGLYPASSLYVQGPWLKAHKAEATKLAHAFVKTLKFIN 277 Query: 273 THSAEEVADKMPKDYYGGNKAIYVQALKASLPMYSPDGKMPAGGPEQVLKVMAGFNPNIK 332 THSA E+ADKMPKDYYG NK +YVQAL+ SLPM+S DGKMP GGPE VL+V++GFNPN+K Sbjct: 278 THSAAEIADKMPKDYYGNNKPMYVQALQNSLPMFSADGKMPPGGPETVLQVLSGFNPNVK 337 Query: 333 GKNIDLSKTYTNEFVDAVK 351 GK+IDL+KTYTNEFV K Sbjct: 338 GKHIDLAKTYTNEFVSQAK 356 >ref|YP_001887794.1| NMT1/THI5 like domain-containing protein [Burkholderia phytofirmans PsJN] gb|ACD18424.1| NMT1/THI5 like domain protein [Burkholderia phytofirmans PsJN] Length = 356 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 212/313 (67%), Positives = 259/313 (82%) Query: 39 QAHAADKIIIMVGGINKLIYLPPKLAESLGYFKEEGLDVELQSQPAGVDAENELLAGAVQ 98 +A + +KI+IMVGGI KLIYLP +L E LGYFK EGLDVELQSQPAGVDAENELLAG VQ Sbjct: 43 RADSPEKIVIMVGGITKLIYLPARLTEQLGYFKAEGLDVELQSQPAGVDAENELLAGGVQ 102 Query: 99 AVVGYYDHSIDLQSKGKEVTSITQLLLVPGGMEMVRADLADSVRSMADLKGKTLGVTGLG 158 AVVG+YDH+IDLQ+KGKE+ +I VPG +EMV A A S+RSMAD+KGKTLGVTGLG Sbjct: 103 AVVGFYDHAIDLQAKGKEIKAIVVFGQVPGEVEMVAARAAGSIRSMADVKGKTLGVTGLG 162 Query: 159 SSSSFLAQYLASRAGLKAGDYSILPVGAGNTLIAAMKQKRVDVAWTTEPTTSILLASGAA 218 SS++FL QYLAS G+ Y++LPVGA N+ IAA++Q R+D TTEPT S LL SG A Sbjct: 163 SSTNFLTQYLASLKGVPRSQYTVLPVGADNSFIAAIRQGRIDAGMTTEPTVSQLLKSGDA 222 Query: 219 KVLVDMSSVEGTKAALGGLYPASSLYVHRSWMVSHKADAQKLARAFVKTLKYIQTHSAEE 278 +VLVDM +VEGT+AALGG YPASSLYV +W+ +H +A KLARA VKTL+Y+ THSAEE Sbjct: 223 RVLVDMRNVEGTRAALGGTYPASSLYVQSAWLDTHPQEAAKLARALVKTLRYLNTHSAEE 282 Query: 279 VADKMPKDYYGGNKAIYVQALKASLPMYSPDGKMPAGGPEQVLKVMAGFNPNIKGKNIDL 338 +A +MPKDY G ++A+YV ALKASLPM++ DGKMPA GPE VLKV+AGFNP++KG++IDL Sbjct: 283 IAAQMPKDYIGNDEALYVSALKASLPMFTADGKMPADGPETVLKVLAGFNPSVKGRHIDL 342 Query: 339 SKTYTNEFVDAVK 351 S+T+TN+FV+ VK Sbjct: 343 SRTFTNQFVNEVK 355 >ref|YP_003608206.1| NMT1/THI5 like domain protein [Burkholderia sp. CCGE1002] gb|ADG18695.1| NMT1/THI5 like domain protein [Burkholderia sp. CCGE1002] Length = 339 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 210/306 (68%), Positives = 251/306 (82%) Query: 44 DKIIIMVGGINKLIYLPPKLAESLGYFKEEGLDVELQSQPAGVDAENELLAGAVQAVVGY 103 +KI IMVGG K+IYLP KL E LGYFK+EGLDVE+ SQPAGVDAENELLAGAVQ VVG+ Sbjct: 27 EKITIMVGGATKIIYLPAKLTEQLGYFKDEGLDVEILSQPAGVDAENELLAGAVQGVVGF 86 Query: 104 YDHSIDLQSKGKEVTSITQLLLVPGGMEMVRADLADSVRSMADLKGKTLGVTGLGSSSSF 163 YDH+IDLQSKGKEV ++ VPG +EMV ADS++SMAD+KGKTLGVTGLGSS+SF Sbjct: 87 YDHTIDLQSKGKEVQALVVFGQVPGEVEMVSTKAADSLKSMADVKGKTLGVTGLGSSTSF 146 Query: 164 LAQYLASRAGLKAGDYSILPVGAGNTLIAAMKQKRVDVAWTTEPTTSILLASGAAKVLVD 223 L QYLA RAG+ + Y++LPVGA N+ IAA+KQ R+D TTEPT S LL +G AKVLVD Sbjct: 147 LTQYLAQRAGVPSTQYTMLPVGADNSFIAAVKQSRIDAGMTTEPTVSQLLKTGDAKVLVD 206 Query: 224 MSSVEGTKAALGGLYPASSLYVHRSWMVSHKADAQKLARAFVKTLKYIQTHSAEEVADKM 283 M +V+GT+AALGG YPASS YV R+W SHK DA KL+ AF KTL +I THSAE++A KM Sbjct: 207 MRTVDGTRAALGGTYPASSFYVQRAWAESHKDDAAKLSHAFAKTLNFIATHSAEDIAAKM 266 Query: 284 PKDYYGGNKAIYVQALKASLPMYSPDGKMPAGGPEQVLKVMAGFNPNIKGKNIDLSKTYT 343 PKDYYG NK +YV ALKASLPM++ DGKMPA GP+ VLKV++ FNP++KGK+IDL+KTYT Sbjct: 267 PKDYYGNNKDLYVNALKASLPMFTKDGKMPADGPDTVLKVLSAFNPSVKGKHIDLAKTYT 326 Query: 344 NEFVDA 349 N+F+ A Sbjct: 327 NDFLSA 332