BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4258.p (472 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776775.1| major facilitator superfamily permease [Herb... 746 0.0 ref|YP_001895870.1| major facilitator superfamily protein [Burkh... 540 e-151 ref|YP_003605241.1| major facilitator superfamily MFS_1 [Burkhol... 538 e-150 ref|ZP_03270593.1| major facilitator superfamily MFS_1 [Burkhold... 538 e-150 ref|YP_558997.1| major facilitator superfamily multidrug efflux ... 536 e-150 >ref|YP_003776775.1| major facilitator superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ64867.1| permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 498 Score = 746 bits (1925), Expect = 0.0, Method: Composition-based stats. Identities = 431/476 (90%), Positives = 447/476 (93%), Gaps = 5/476 (1%) Query: 1 MSANQPPRPSDTAASASPS----LNDPVTQRAL-WIVASGFFMQTLDTTIVNTALPAMAR 55 MSANQPPR DT +S S S +NDPVTQRAL WIVASGFFMQTLDTTIVNTALPAMAR Sbjct: 22 MSANQPPRLRDTPSSPSTSASASINDPVTQRALLWIVASGFFMQTLDTTIVNTALPAMAR 81 Query: 56 SLAEPVLNMHPVVVAYTLTMASLTPASGWLADRFGTRRVYFAAILLFALGSVLCAMAPTL 115 SL EPVLNMHPVVVAYTLTMASLTPASGWLADRFGTRR+YFAAILLF+LGS+LCAMA +L Sbjct: 82 SLGEPVLNMHPVVVAYTLTMASLTPASGWLADRFGTRRMYFAAILLFSLGSLLCAMASSL 141 Query: 116 PMLLAARVIQGLGGSMLLPVGRLAVLRAVPGAQYIAALASISIAGQLGPVVGPVLGGWLV 175 PMLLAARV+QGLGGSMLLPVGRLAVLRAVPGAQYIAALASISIAGQLGPVVGPVLGGWLV Sbjct: 142 PMLLAARVVQGLGGSMLLPVGRLAVLRAVPGAQYIAALASISIAGQLGPVVGPVLGGWLV 201 Query: 176 ESLSWHWIFLINLPVGVLGMGAVLYFLPDDSLTGTPRFDLFGCALLSACMVAFSLALDVP 235 ESLSWHWIFLINLPVGVLGMGAVLYFLPDDSL GTPRFDL GC LLSACMVAFSLALDVP Sbjct: 202 ESLSWHWIFLINLPVGVLGMGAVLYFLPDDSLAGTPRFDLLGCVLLSACMVAFSLALDVP 261 Query: 236 FDTHRTGWSLGLFALAALTVLVYWRHASVHPRPLFRLGLFGEPNFSIGLAGNLVCRIGSS 295 FD+HRTGWS+ LF +AALTVL YWRHASVHPRPLFRLGLFGEPNFSIGLAGNLVCRIGSS Sbjct: 262 FDSHRTGWSIALFVVAALTVLGYWRHASVHPRPLFRLGLFGEPNFSIGLAGNLVCRIGSS 321 Query: 296 AVPFLLPLLLQVRLGYSPLHAGMLLLPAAIAGTIAKPWIAPLVKRFGYDRFLLINTAIVG 355 AVPFLLPLLLQVRLGYSPLHAGM+LLPAAIAGTIAKPWIAPLVKRFGYDRFLL+NTAIVG Sbjct: 322 AVPFLLPLLLQVRLGYSPLHAGMVLLPAAIAGTIAKPWIAPLVKRFGYDRFLLVNTAIVG 381 Query: 356 ISIVSFALITPGWPLAASIVQLAVFGASNSMQFAAMNSVTLKGLRKEDAGSGNSLFSMVQ 415 +I+SFALITP WPL A+IVQLA+FGASNSMQFAAMNSVTLKGL K DAGSGNSLFSMVQ Sbjct: 382 AAIMSFALITPDWPLTAAIVQLAIFGASNSMQFAAMNSVTLKGLDKRDAGSGNSLFSMVQ 441 Query: 416 MLAIGLGVTIGGTMVNAFKSEAGIATNASFQITFVIVGLITLVSAWVFRKMDPRYF 471 MLAIGLGVTIGGTMVN FKSE G ATNASFQITF IVG ITL SAWVFRKMDPRYF Sbjct: 442 MLAIGLGVTIGGTMVNLFKSEVGTATNASFQITFAIVGAITLASAWVFRKMDPRYF 497 >ref|YP_001895870.1| major facilitator superfamily protein [Burkholderia phytofirmans PsJN] gb|ACD16646.1| major facilitator superfamily MFS_1 [Burkholderia phytofirmans PsJN] Length = 466 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 308/439 (70%), Positives = 360/439 (82%), Gaps = 1/439 (0%) Query: 29 LWIVASGFFMQTLDTTIVNTALPAMARSLAEPVLNMHPVVVAYTLTMASLTPASGWLADR 88 LWIVA+GFFMQ+LDTTIVNTALP++A SL L M P+VVAYTLTMA LTPASGWLADR Sbjct: 11 LWIVAAGFFMQSLDTTIVNTALPSIANSLYVAPLAMQPIVVAYTLTMAMLTPASGWLADR 70 Query: 89 FGTRRVYFAAILLFALGSVLCAMAPTLPMLLAARVIQGLGGSMLLPVGRLAVLRAVPGAQ 148 FGTRRVYFAAIL+F LGS+ CA A TL L+ ARV+QG+GGSMLLP+GRLAVLR+V G Q Sbjct: 71 FGTRRVYFAAILVFVLGSICCASAHTLGQLVMARVLQGVGGSMLLPIGRLAVLRSVTGDQ 130 Query: 149 YIAALASISIAGQLGPVVGPVLGGWLVESLSWHWIFLINLPVGVLGMGAVLYFLPDDSLT 208 Y+AALA IS+AGQLGP+ GP LGGW V++++WHWIFLIN+P+G +G+ AV FLP Sbjct: 131 YVAALAFISVAGQLGPIAGPTLGGWFVQAITWHWIFLINVPIGAVGLYAVQRFLPSHGEA 190 Query: 209 GTPRFDLFGCALLSACMVAFSLALDVPFDTHRTGWSLGLFALAALTVLVYWRHASVHPRP 268 P FD GC LLS CM+AFSLA+D P THR WS+ LFALAA++ L Y HA P Sbjct: 191 KAPPFDFVGCGLLSLCMIAFSLAVDSPMPTHRVAWSVALFALAAISALAYIPHARRRVNP 250 Query: 269 LFRLGLFGEPNFSIGLAGNLVCRIGSSAVPFLLPLLLQVRLGYSPLHAGMLLLPAAIAGT 328 LF+L LF EPNFS+GL GNLVCRIGSSAVPFL+PLLLQ++LGYSPLH+G+++LPAA+AGT Sbjct: 251 LFKLSLFREPNFSVGLIGNLVCRIGSSAVPFLVPLLLQLQLGYSPLHSGLMMLPAALAGT 310 Query: 329 IAKPWIAPLVKRFGYDRFLLINTAIVGISIVSFALITPGWPLAASIVQLAVFGASNSMQF 388 +AK WIAPLV+R+GYD FLLINT +VG SIV+FALIT G PL I LAVFGA+NSMQF Sbjct: 311 VAKRWIAPLVRRYGYDTFLLINTIVVGSSIVAFALITRGTPLVVEIAILAVFGAANSMQF 370 Query: 389 AAMNSVTLKGLRKEDAGSGNSLFSMVQMLAIGLGVTIGGTMVNAFKSEAGIATNASFQIT 448 AAMNSVTLKGL EDAGSGNSLFSMVQMLAIGLGV+IGG +VN F ++AG A F++ Sbjct: 371 AAMNSVTLKGLSHEDAGSGNSLFSMVQMLAIGLGVSIGGGLVNLFSAQAGSAA-LGFRLA 429 Query: 449 FVIVGLITLVSAWVFRKMD 467 FV VG+ITLVSAWVFR +D Sbjct: 430 FVCVGVITLVSAWVFRHLD 448 >ref|YP_003605241.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1002] gb|ADG15730.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1002] Length = 466 Score = 538 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 302/439 (68%), Positives = 357/439 (81%), Gaps = 1/439 (0%) Query: 29 LWIVASGFFMQTLDTTIVNTALPAMARSLAEPVLNMHPVVVAYTLTMASLTPASGWLADR 88 LWIVA+GFFMQ+LDTTIVNTALP++A SL L M PVVVAYTLTMA LTPASGWLADR Sbjct: 11 LWIVAAGFFMQSLDTTIVNTALPSIANSLHVAPLAMQPVVVAYTLTMAMLTPASGWLADR 70 Query: 89 FGTRRVYFAAILLFALGSVLCAMAPTLPMLLAARVIQGLGGSMLLPVGRLAVLRAVPGAQ 148 FGTRRVYFAAIL+F LGS+ C+ A TL L+ ARV+QGLGGSMLLP+GRLAVLR+V G Q Sbjct: 71 FGTRRVYFAAILVFVLGSICCSSAHTLGQLVMARVLQGLGGSMLLPIGRLAVLRSVSGEQ 130 Query: 149 YIAALASISIAGQLGPVVGPVLGGWLVESLSWHWIFLINLPVGVLGMGAVLYFLPDDSLT 208 Y++ALA ISIAGQLGP+ GP LGGW V++++WHWIFLIN+P+G LG+ AV FLP T Sbjct: 131 YVSALAFISIAGQLGPIAGPTLGGWFVQAITWHWIFLINVPIGALGLYAVHRFLPSHDET 190 Query: 209 GTPRFDLFGCALLSACMVAFSLALDVPFDTHRTGWSLGLFALAALTVLVYWRHASVHPRP 268 PRFD+ GCALLS CM+AFSLA+D P HR WS GLFALA + L Y +A P Sbjct: 191 QAPRFDVIGCALLSLCMIAFSLAIDAPVRAHRAAWSAGLFALAVASALAYIPYARNRRNP 250 Query: 269 LFRLGLFGEPNFSIGLAGNLVCRIGSSAVPFLLPLLLQVRLGYSPLHAGMLLLPAAIAGT 328 LF+L LFGEPNFS+GL GNLVCR+GSSAVPFL+PLLLQ++LGYSPLH+G+++LPAA AGT Sbjct: 251 LFKLSLFGEPNFSVGLIGNLVCRVGSSAVPFLVPLLLQLQLGYSPLHSGLMMLPAAFAGT 310 Query: 329 IAKPWIAPLVKRFGYDRFLLINTAIVGISIVSFALITPGWPLAASIVQLAVFGASNSMQF 388 +AK WIAPLV+R+GYD FLL+NT IVG +IV+F+LI+ G PL + LAVFGA+NSMQ+ Sbjct: 311 LAKRWIAPLVRRYGYDTFLLVNTIIVGSAIVAFSLISRGTPLVIEVAILAVFGAANSMQY 370 Query: 389 AAMNSVTLKGLRKEDAGSGNSLFSMVQMLAIGLGVTIGGTMVNAFKSEAGIATNASFQIT 448 AAMNSVTLK L EDAG GNSLFSMVQMLAIGLGV+IGG +VN F + G A F++ Sbjct: 371 AAMNSVTLKDLSHEDAGMGNSLFSMVQMLAIGLGVSIGGGLVNLFADQWGSA-ELGFRLA 429 Query: 449 FVIVGLITLVSAWVFRKMD 467 FV VG+ITLVSAW+FR +D Sbjct: 430 FVCVGVITLVSAWIFRHLD 448 >ref|ZP_03270593.1| major facilitator superfamily MFS_1 [Burkholderia sp. H160] gb|EDZ97833.1| major facilitator superfamily MFS_1 [Burkholderia sp. H160] Length = 488 Score = 538 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 303/439 (69%), Positives = 360/439 (82%), Gaps = 1/439 (0%) Query: 29 LWIVASGFFMQTLDTTIVNTALPAMARSLAEPVLNMHPVVVAYTLTMASLTPASGWLADR 88 LWIVA+GFFMQ+LDTTIVNTALP++A SL L M PVVVAYTLTMA LTPASGWLADR Sbjct: 33 LWIVAAGFFMQSLDTTIVNTALPSIANSLHVAPLAMQPVVVAYTLTMAMLTPASGWLADR 92 Query: 89 FGTRRVYFAAILLFALGSVLCAMAPTLPMLLAARVIQGLGGSMLLPVGRLAVLRAVPGAQ 148 FGTRRVYFAAIL+F LGS+ C+ A TL L+ ARV+QGLGGSMLLP+GRLAVLR+V G Q Sbjct: 93 FGTRRVYFAAILVFVLGSICCSSAHTLGQLVMARVLQGLGGSMLLPIGRLAVLRSVSGEQ 152 Query: 149 YIAALASISIAGQLGPVVGPVLGGWLVESLSWHWIFLINLPVGVLGMGAVLYFLPDDSLT 208 Y++ALA ISIAGQLGP+ GP LGGW V++++WHWIFLIN+P+G +G+ AV FLP T Sbjct: 153 YVSALAFISIAGQLGPIAGPTLGGWFVQAVTWHWIFLINVPIGAIGLYAVQRFLPSHDET 212 Query: 209 GTPRFDLFGCALLSACMVAFSLALDVPFDTHRTGWSLGLFALAALTVLVYWRHASVHPRP 268 P FD+ GCALLS CM+AFSLA+D P +HR WS GLFALA + L Y +A P Sbjct: 213 QAPPFDVIGCALLSLCMIAFSLAIDAPVPSHRAAWSAGLFALAVASALAYIPYAKNRRDP 272 Query: 269 LFRLGLFGEPNFSIGLAGNLVCRIGSSAVPFLLPLLLQVRLGYSPLHAGMLLLPAAIAGT 328 LF+L LFGEPNFS+GL GNLVCR+GSSAVPFL+PLLLQ++LGYSPLH+G+++LPAA+AGT Sbjct: 273 LFKLSLFGEPNFSVGLIGNLVCRVGSSAVPFLVPLLLQLQLGYSPLHSGLMMLPAALAGT 332 Query: 329 IAKPWIAPLVKRFGYDRFLLINTAIVGISIVSFALITPGWPLAASIVQLAVFGASNSMQF 388 +AK WIAPLV+R+GYD FLL+NT IVG +IV+F+LI+ G PL I LAVFGA+NSMQF Sbjct: 333 LAKRWIAPLVRRYGYDTFLLVNTIIVGSAIVAFSLISRGTPLVIEIAILAVFGAANSMQF 392 Query: 389 AAMNSVTLKGLRKEDAGSGNSLFSMVQMLAIGLGVTIGGTMVNAFKSEAGIATNASFQIT 448 AAMNSVTLK L EDAGSGNSLFSMVQMLAIGLGV+IGG +VN F ++ G A F++ Sbjct: 393 AAMNSVTLKDLSHEDAGSGNSLFSMVQMLAIGLGVSIGGGLVNLFAAQWGSA-ELGFRLA 451 Query: 449 FVIVGLITLVSAWVFRKMD 467 FV VG+ITLVSAW+FR +D Sbjct: 452 FVCVGVITLVSAWIFRHLD 470 >ref|YP_558997.1| major facilitator superfamily multidrug efflux transporter [Burkholderia xenovorans LB400] gb|ABE30945.1| Major facilitator superfamily (MFS) multidrug efflux pump [Burkholderia xenovorans LB400] Length = 466 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 306/439 (69%), Positives = 356/439 (81%), Gaps = 1/439 (0%) Query: 29 LWIVASGFFMQTLDTTIVNTALPAMARSLAEPVLNMHPVVVAYTLTMASLTPASGWLADR 88 LWIVA+GFFMQ+LDTTIVNTALP++A SL L M P+VVAYTLTMA LTPASGWLADR Sbjct: 11 LWIVAAGFFMQSLDTTIVNTALPSIANSLHVAPLAMQPIVVAYTLTMAMLTPASGWLADR 70 Query: 89 FGTRRVYFAAILLFALGSVLCAMAPTLPMLLAARVIQGLGGSMLLPVGRLAVLRAVPGAQ 148 FGTRRVYFAAILLF +GS+ CA A TL L+ ARV+QG+GGSMLLP+GRLAVLR+V G Q Sbjct: 71 FGTRRVYFAAILLFVIGSICCASAHTLGQLVMARVLQGVGGSMLLPIGRLAVLRSVTGEQ 130 Query: 149 YIAALASISIAGQLGPVVGPVLGGWLVESLSWHWIFLINLPVGVLGMGAVLYFLPDDSLT 208 Y+AALA IS+AGQLGP+ GP LGGW V++++WHWIFLIN+P+G +G+ AV FLP T Sbjct: 131 YVAALAFISVAGQLGPIAGPTLGGWFVQAITWHWIFLINVPIGAVGLYAVQRFLPSHGET 190 Query: 209 GTPRFDLFGCALLSACMVAFSLALDVPFDTHRTGWSLGLFALAALTVLVYWRHASVHPRP 268 P FD GC LLS CM+AFSLA+D P THR WS LF LAAL+ L Y HA P Sbjct: 191 QAPPFDFVGCGLLSLCMIAFSLAIDAPMPTHRLAWSAALFVLAALSALAYIPHAKRRVNP 250 Query: 269 LFRLGLFGEPNFSIGLAGNLVCRIGSSAVPFLLPLLLQVRLGYSPLHAGMLLLPAAIAGT 328 LF+L LF EPNFS+GL GNLVCRIGSSAVPFL+PLLLQ++LGYSPLH+G+++LPAA+AGT Sbjct: 251 LFKLSLFREPNFSVGLIGNLVCRIGSSAVPFLVPLLLQLQLGYSPLHSGLMMLPAALAGT 310 Query: 329 IAKPWIAPLVKRFGYDRFLLINTAIVGISIVSFALITPGWPLAASIVQLAVFGASNSMQF 388 +AK WIAPLV+R+GYD FLL+NT IVG SIV+FALIT G PL I LAVFGA+NSMQF Sbjct: 311 VAKRWIAPLVRRYGYDTFLLVNTVIVGSSIVAFALITRGTPLVVEIAILAVFGAANSMQF 370 Query: 389 AAMNSVTLKGLRKEDAGSGNSLFSMVQMLAIGLGVTIGGTMVNAFKSEAGIATNASFQIT 448 AAMNSVTLK L DAGSGNSLFSMVQMLAIGLGV+IGG +VN F ++ G A F++ Sbjct: 371 AAMNSVTLKDLSHADAGSGNSLFSMVQMLAIGLGVSIGGGLVNLFSAQVGSAA-LGFRLA 429 Query: 449 FVIVGLITLVSAWVFRKMD 467 FV VG+ITLVSAWVFR +D Sbjct: 430 FVCVGVITLVSAWVFRHLD 448