BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4257.p (228 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776774.1| iron-regulated protein [Herbaspirillum serop... 437 e-121 ref|YP_004752303.1| iron-uptake factor [Collimonas fungivorans T... 397 e-109 ref|YP_585219.1| Fe(II)-dependent oxygenase superfamily protein ... 382 e-104 ref|YP_001892346.1| 2OG-Fe(II) oxygenase [Ralstonia pickettii 12... 381 e-104 ref|YP_297082.1| putative hydroxylase [Ralstonia eutropha JMP134... 380 e-104 >ref|YP_003776774.1| iron-regulated protein [Herbaspirillum seropedicae SmR1] gb|ADJ64866.1| iron-regulated protein [Herbaspirillum seropedicae SmR1] Length = 228 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 211/228 (92%), Positives = 220/228 (96%) Query: 1 MLITIPQLLDPQALQTVRSLLDNAGPAWVDGRVTAGYQGAPVKYNQQIDEQSDVALQCQR 60 MLITIPQLLD QALQTVRSLL+ AG AWVDGRVTAGYQGAPVK+NQQIDE S+VALQCQR Sbjct: 1 MLITIPQLLDTQALQTVRSLLEQAGEAWVDGRVTAGYQGAPVKFNQQIDEHSEVALQCQR 60 Query: 61 IIVSALERHPRFISAALPNLIYPPMFNRYGEGMTFGAHVDGSVRIHPHSGRKLRTDVSAT 120 IIVSALERHPRFISAALPNLIYPPMFNRYGEGM FGAHVDGSVRIHPH+GRKLRTDVSAT Sbjct: 61 IIVSALERHPRFISAALPNLIYPPMFNRYGEGMHFGAHVDGSVRIHPHNGRKLRTDVSAT 120 Query: 121 LFLADPEDYDGGELQIDDSYGMHSVKLAAGDMVLYPATSLHTVTPVTRGVRVGCFFWVQS 180 LFLADP DYDGG+LQIDDSYG HSVKLAAGDMVLYPATSLHTVTPVTRGVR+ CFFWVQS Sbjct: 121 LFLADPGDYDGGDLQIDDSYGAHSVKLAAGDMVLYPATSLHTVTPVTRGVRLACFFWVQS 180 Query: 181 LVRDDGQRQMLFDMDNAIQRLNQTDADALARRTLVGCYHNLLRQWSET 228 LVRDDGQRQ+LFDMDNAIQRLNQT+ADALARRTLVGCYHNLLRQWS+T Sbjct: 181 LVRDDGQRQLLFDMDNAIQRLNQTEADALARRTLVGCYHNLLRQWSDT 228 >ref|YP_004752303.1| iron-uptake factor [Collimonas fungivorans Ter331] gb|AEK61480.1| Iron-uptake factor [Collimonas fungivorans Ter331] Length = 228 Score = 397 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 185/228 (81%), Positives = 205/228 (89%) Query: 1 MLITIPQLLDPQALQTVRSLLDNAGPAWVDGRVTAGYQGAPVKYNQQIDEQSDVALQCQR 60 MLI IP++LD + L VR LLD AG AWVDGRVTAGYQGA VK+NQQIDE+S+VA QCQ+ Sbjct: 1 MLIAIPEVLDARQLDAVRQLLDQAGAAWVDGRVTAGYQGAAVKFNQQIDERSEVAQQCQQ 60 Query: 61 IIVSALERHPRFISAALPNLIYPPMFNRYGEGMTFGAHVDGSVRIHPHSGRKLRTDVSAT 120 II+ ALERHPRFISAALPN +YPPMFNRYGEGM FGAHVDGSVRIHPH GRKLRTD+SAT Sbjct: 61 IILQALERHPRFISAALPNTVYPPMFNRYGEGMAFGAHVDGSVRIHPHDGRKLRTDISAT 120 Query: 121 LFLADPEDYDGGELQIDDSYGMHSVKLAAGDMVLYPATSLHTVTPVTRGVRVGCFFWVQS 180 LFL+DP YDGGELQI+DSYGMHSVKLAAGDMV+YPATSLH VTP+TRG+R CFFWVQS Sbjct: 121 LFLSDPASYDGGELQIEDSYGMHSVKLAAGDMVIYPATSLHQVTPITRGMRSACFFWVQS 180 Query: 181 LVRDDGQRQMLFDMDNAIQRLNQTDADALARRTLVGCYHNLLRQWSET 228 LVRDD +R MLFDMDNAIQ+LNQT+AD ARRTL+GCYHNL+RQWSET Sbjct: 181 LVRDDARRSMLFDMDNAIQKLNQTNADEQARRTLIGCYHNLMRQWSET 228 >ref|YP_585219.1| Fe(II)-dependent oxygenase superfamily protein [Cupriavidus metallidurans CH34] sp|Q1LIS6|Y3078_RALME RecName: Full=PKHD-type hydroxylase Rmet_3078 gb|ABF09950.1| PKHD-type hydroxylase [Cupriavidus metallidurans CH34] Length = 228 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 174/228 (76%), Positives = 203/228 (89%) Query: 1 MLITIPQLLDPQALQTVRSLLDNAGPAWVDGRVTAGYQGAPVKYNQQIDEQSDVALQCQR 60 ML+ IPQ+L+ + L +R LD+AG AWVDGRVTAGY GAPVK+NQQIDE+S+ A QCQ Sbjct: 1 MLVRIPQVLNAEQLAMLREQLDHAGDAWVDGRVTAGYSGAPVKFNQQIDERSEAAAQCQH 60 Query: 61 IIVSALERHPRFISAALPNLIYPPMFNRYGEGMTFGAHVDGSVRIHPHSGRKLRTDVSAT 120 +++SALER+P FISA LPN++YPPMFNRY EGMTFG HVDG VR+HPH+GRKLRTDVSAT Sbjct: 61 LVLSALERNPLFISAVLPNIVYPPMFNRYSEGMTFGLHVDGGVRLHPHNGRKLRTDVSAT 120 Query: 121 LFLADPEDYDGGELQIDDSYGMHSVKLAAGDMVLYPATSLHTVTPVTRGVRVGCFFWVQS 180 LFL+DP YDGGELQI+D+YG+HSVKLAAGDMV+YP+TSLH V P+TRGVRVGCFFW+QS Sbjct: 121 LFLSDPASYDGGELQIEDTYGVHSVKLAAGDMVVYPSTSLHQVKPITRGVRVGCFFWIQS 180 Query: 181 LVRDDGQRQMLFDMDNAIQRLNQTDADALARRTLVGCYHNLLRQWSET 228 L+RDDGQR +LFDMDNAIQ LNQT+AD ARRTLVGCYHNLLRQWS+T Sbjct: 181 LIRDDGQRALLFDMDNAIQTLNQTNADERARRTLVGCYHNLLRQWSDT 228 >ref|YP_001892346.1| 2OG-Fe(II) oxygenase [Ralstonia pickettii 12J] ref|YP_002983845.1| hydroxylase [Ralstonia pickettii 12D] gb|ACD28919.1| 2OG-Fe(II) oxygenase [Ralstonia pickettii 12J] gb|ACS65173.1| 2OG-Fe(II) oxygenase [Ralstonia pickettii 12D] Length = 228 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 175/228 (76%), Positives = 201/228 (88%) Query: 1 MLITIPQLLDPQALQTVRSLLDNAGPAWVDGRVTAGYQGAPVKYNQQIDEQSDVALQCQR 60 ML+ IP + + +R LLD+AG AWVDGRV+AGY GAPVK NQQIDE ++VALQCQ+ Sbjct: 1 MLVCIPNVFTAAQVAALRDLLDSAGDAWVDGRVSAGYSGAPVKVNQQIDEGAEVALQCQQ 60 Query: 61 IIVSALERHPRFISAALPNLIYPPMFNRYGEGMTFGAHVDGSVRIHPHSGRKLRTDVSAT 120 +I+S LERHPRFISAALPN++YPPMFNRYGEGMTFGAHVDGSVRIHPH+G KLRTD+SAT Sbjct: 61 LILSVLERHPRFISAALPNVVYPPMFNRYGEGMTFGAHVDGSVRIHPHNGTKLRTDISAT 120 Query: 121 LFLADPEDYDGGELQIDDSYGMHSVKLAAGDMVLYPATSLHTVTPVTRGVRVGCFFWVQS 180 LFL+DP YDGGELQI+D+YGMHSVKL AGD+V+YPATSLH VTP+TRGVRV FFW+QS Sbjct: 121 LFLSDPASYDGGELQIEDTYGMHSVKLNAGDLVIYPATSLHQVTPITRGVRVASFFWIQS 180 Query: 181 LVRDDGQRQMLFDMDNAIQRLNQTDADALARRTLVGCYHNLLRQWSET 228 L+RDD QR MLFD+DNAIQ LNQTDADA ARRTL+G YHNL+RQWSET Sbjct: 181 LIRDDAQRAMLFDLDNAIQMLNQTDADATARRTLIGVYHNLMRQWSET 228 >ref|YP_297082.1| putative hydroxylase [Ralstonia eutropha JMP134] sp|Q46X95|Y2877_RALEJ RecName: Full=PKHD-type hydroxylase Reut_A2877 gb|AAZ62238.1| 2OG-Fe(II) oxygenase [Ralstonia eutropha JMP134] Length = 228 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 176/228 (77%), Positives = 201/228 (88%) Query: 1 MLITIPQLLDPQALQTVRSLLDNAGPAWVDGRVTAGYQGAPVKYNQQIDEQSDVALQCQR 60 ML+ IPQ+L+ + + VR L++AG AWVDGRVTAGY GAPVK+NQQIDE+SDVAL+CQR Sbjct: 1 MLVVIPQVLNAEQVGAVRERLEHAGEAWVDGRVTAGYSGAPVKFNQQIDERSDVALECQR 60 Query: 61 IIVSALERHPRFISAALPNLIYPPMFNRYGEGMTFGAHVDGSVRIHPHSGRKLRTDVSAT 120 +I+ LER+PRFISAALPN++YPPMFNRY EGMTFGAHVDGSVRIHPH GRKLRTD+SAT Sbjct: 61 LILGMLERNPRFISAALPNIVYPPMFNRYSEGMTFGAHVDGSVRIHPHDGRKLRTDISAT 120 Query: 121 LFLADPEDYDGGELQIDDSYGMHSVKLAAGDMVLYPATSLHTVTPVTRGVRVGCFFWVQS 180 LFL+ + YDGGELQ+ D+YGMHSVKL AGDMV+YPATSLH VTP+TRG RV FFW+QS Sbjct: 121 LFLSPHDSYDGGELQVQDTYGMHSVKLDAGDMVVYPATSLHQVTPITRGTRVASFFWIQS 180 Query: 181 LVRDDGQRQMLFDMDNAIQRLNQTDADALARRTLVGCYHNLLRQWSET 228 L+RDD QR +LFDMDNAIQRLNQT AD ARRTLVGCYHNLLRQWSET Sbjct: 181 LIRDDTQRSLLFDMDNAIQRLNQTGADEEARRTLVGCYHNLLRQWSET 228