BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4249.p         (1160 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776769.1| two component hybrid sensor histidine kinase...  1872   0.0  
ref|ZP_01463090.1| sensor histidine kinase/response regulator [S...  1318   0.0  
ref|YP_004236356.1| multi-sensor hybrid histidine kinase [Acidov...  1235   0.0  
ref|YP_972312.1| multi-sensor hybrid histidine kinase [Acidovora...  1220   0.0  
ref|YP_002552106.1| histidine kinase [Acidovorax ebreus TPSY] >g...  1135   0.0  

>ref|YP_003776769.1| two component hybrid sensor histidine kinase/response regulator
            protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ64861.1| two component hybrid sensor histidine kinase/response regulator
            protein [Herbaspirillum seropedicae SmR1]
          Length = 1160

 Score = 1872 bits (4850), Expect = 0.0,   Method: Composition-based stats.
 Identities = 1043/1163 (89%), Positives = 1095/1163 (94%), Gaps = 6/1163 (0%)

Query: 1    MLKRQGKGAFSGPPLPLGPLIGFSVAILAVVLIALFTWEASVSRGLAANAVSHTMKVREQ 60
            MLKRQGKGAFSGPPLPLGPLIGF+VAILAVVLIALFT+EASVSRG AANAVSHTMKVREQ
Sbjct: 1    MLKRQGKGAFSGPPLPLGPLIGFAVAILAVVLIALFTYEASVSRGQAANAVSHTMKVREQ 60

Query: 61   LQVLVSTLKDAETSQRGFLLTGTESYLSPYNQARAALPGEIARLRELLSDNPDQLQRLSQ 120
            LQ LVSTLKDAETSQRG+LLTGTESYLSPYNQARAALPGEIARLR LL+DNPDQLQRLSQ
Sbjct: 61   LQSLVSTLKDAETSQRGYLLTGTESYLSPYNQARAALPGEIARLRALLADNPDQLQRLSQ 120

Query: 121  IERVVADKLEELAETVSRRRNGDTAGALAVVQSDRGKMFMDRVRVLSRDMEEQERDLLAS 180
            IE +  DKL+ELAET+  RR GD A ALAVVQSDRGKM MDRVR L+R+ME +ERDLLA+
Sbjct: 121  IEGITNDKLQELAETIDLRRKGDAAAALAVVQSDRGKMSMDRVRTLAREMEGEERDLLAA 180

Query: 181  RQSDWRDAVVFSTAVAWGGSGLLLVLIIAAAMTTSRDYRAREKQTWIRNGQMGLAERLQG 240
            RQSDWRDAV FSTAVAWGGSGLLLVLI+AAAMTTSRDYR REKQ WIR GQMGLAERLQG
Sbjct: 181  RQSDWRDAVSFSTAVAWGGSGLLLVLIVAAAMTTSRDYRQREKQAWIRAGQMGLAERLQG 240

Query: 241  EQRLGALGENTLAFLTAYLNAQVGAIYLRTDSGDFQRFAAYALEEDASEQPPHLRDGQGL 300
            EQRL ALG+NTL+FLTAYLNAQVGAIYLR+D GDF+RFA++AL  D ++ P  L  GQGL
Sbjct: 241  EQRLDALGDNTLSFLTAYLNAQVGAIYLRSDGGDFERFASHAL--DDADGPRTLHSGQGL 298

Query: 301  LGQAAKLNRAMHVKEVPAQYLTVSSSVGRHAPRELLIVPAAADGVVQAVFELGFLRQVRA 360
            LGQAAKLNRAMHVK+VP  YLT+SS+VGR  PREL++VPA+ADG+VQAVFELGFLRQVR 
Sbjct: 299  LGQAAKLNRAMHVKDVPEDYLTISSAVGRRQPRELMVVPASADGMVQAVFELGFLRQVRP 358

Query: 361  EEEELLARLSDQIAIAVRSSKDRTRLEELLEETQRQSEELQAQQEELRVNNEELEEQGQA 420
            EEEELLARLSDQIAIAVRSSKDRTRLEELLEETQRQSEELQAQQEELRVNNEELEEQGQA
Sbjct: 359  EEEELLARLSDQIAIAVRSSKDRTRLEELLEETQRQSEELQAQQEELRVNNEELEEQGQA 418

Query: 421  LKASQLRLETQQAELEETNAQLEEQTQLLEIQKDDLAKTQVVLVEKATELERANQYKSEF 480
            LKASQLRLETQQAELEETNAQLEEQTQLLE+QKDDLAKTQVVLVEKATELERANQYKSEF
Sbjct: 419  LKASQLRLETQQAELEETNAQLEEQTQLLELQKDDLAKTQVVLVEKATELERANQYKSEF 478

Query: 481  LANMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSK 540
            LANMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSK
Sbjct: 479  LANMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSK 538

Query: 541  MEAGKLDIVSESFVVSKMAEELKASFAMTAQQKGLGFKVEVEPGVPQRMETDMQRLGQIL 600
            MEAGKLDIV ESF ++K+A+EL ASFA+TAQQKGLGFKVEVEPGVPQRMETD+QRLGQIL
Sbjct: 539  MEAGKLDIVPESFPLTKLADELSASFAITAQQKGLGFKVEVEPGVPQRMETDIQRLGQIL 598

Query: 601  KNLLSNAIKFTEKGEVSLRIYADAGGRIAFAVRDTGIGIGADQHQFIFEAFRQADGSTHR 660
            KNLLSNAIKFTEKGEVSLRIY DAGGRIAFAVRDTGIGIG DQHQFIFEAFRQADGSTHR
Sbjct: 599  KNLLSNAIKFTEKGEVSLRIYPDAGGRIAFAVRDTGIGIGEDQHQFIFEAFRQADGSTHR 658

Query: 661  KYGGTGLGLSISRDLAHLLGGDIQVQSRVGEGSIFTLSLPQVYSGEQAV---MRTALPVP 717
            KYGGTGLGLSISRDLAHLLGGDI+V SR+GEGSIFTLSLP +YS EQAV        P  
Sbjct: 659  KYGGTGLGLSISRDLAHLLGGDIRVTSRLGEGSIFTLSLPPLYSSEQAVSNTAPEPTPAA 718

Query: 718  AAAAATLQAAQVATAPDIRIPSPQVVPGTPAKLQDIAIDDDRHRIESSSRLILVIEDDTA 777
            AAAA+TLQAA VATAPD+RI         P +LQ+I+IDDDR RIE+SSRLILVIEDD A
Sbjct: 719  AAAASTLQAAHVATAPDVRINRTPAA-AAPQRLQEISIDDDRDRIETSSRLILVIEDDAA 777

Query: 778  FAMILRDLAHEMGFQCVVTHSANEGVSAAEMYRPSAILMDMNLPDFSGLGVLDQIKRNPK 837
            FAMILRDLA EMGFQCVVTHSANEGV+AAEMYRPSAILMDMNLPDFSGLGVLDQIKRNPK
Sbjct: 778  FAMILRDLAREMGFQCVVTHSANEGVAAAEMYRPSAILMDMNLPDFSGLGVLDQIKRNPK 837

Query: 838  TRHIPVHVVSVADYSHEALERGAIGYALKPVQREELVGAIRKLEAKFLQGLRHVLVVEDD 897
            TRHIPVHVVSVADYSHEA+ERGAIGYALKPVQREEL+GAIRKLEAKFLQGLRHVLVVEDD
Sbjct: 838  TRHIPVHVVSVADYSHEAMERGAIGYALKPVQREELIGAIRKLEAKFLQGLRHVLVVEDD 897

Query: 898  ARQLDSIRQLLAGENINLVGVRTAADALARLRETTFDCMVMDLNLPDLSGYQLLEKMAEQ 957
            ARQLDSIRQLLAGENINLVGVRTAADALARLR+ TFDCMVMDLNLPDLSGYQLLEKMAEQ
Sbjct: 898  ARQLDSIRQLLAGENINLVGVRTAADALARLRQNTFDCMVMDLNLPDLSGYQLLEKMAEQ 957

Query: 958  EHVAFPPVIVYTGRSLSAEEEQHLRRFSRSIIIKDARSPERLLDEVTLFLHQVETTLPPE 1017
            EHVAFPPVIVYTGRSLSAEEEQ+LRRFSRSIIIKDARSPERLLDEVTLFLHQVETTLP E
Sbjct: 958  EHVAFPPVIVYTGRSLSAEEEQNLRRFSRSIIIKDARSPERLLDEVTLFLHQVETTLPAE 1017

Query: 1018 SQRMLKVARDRETVFEGRRILVVEDDVRNIFALSSVLEPKGMKVDIARNGREALEALQRS 1077
            SQRMLKVARDRETVFEGRRILVVEDDVRNIFALSSVLEPKGMKV+IARNGREAL+ALQRS
Sbjct: 1018 SQRMLKVARDRETVFEGRRILVVEDDVRNIFALSSVLEPKGMKVEIARNGREALQALQRS 1077

Query: 1078 QEQPGAPIDLVLMDIMMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGA 1137
            Q++P APIDLVLMDIMMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGA
Sbjct: 1078 QDKPDAPIDLVLMDIMMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGA 1137

Query: 1138 NDYIAKPLDVEKLLSLVRVWMPK 1160
            NDYIAKPLDVEKLLSLVRVWMPK
Sbjct: 1138 NDYIAKPLDVEKLLSLVRVWMPK 1160


>ref|ZP_01463090.1| sensor histidine kinase/response regulator [Stigmatella aurantiaca
            DW4/3-1]
 ref|YP_003952638.1| sensor protein [Stigmatella aurantiaca DW4/3-1]
 gb|EAU66133.1| sensor histidine kinase/response regulator [Stigmatella aurantiaca
            DW4/3-1]
 gb|ADO70811.1| Sensor protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1171

 Score = 1318 bits (3410), Expect = 0.0,   Method: Composition-based stats.
 Identities = 729/1152 (63%), Positives = 885/1152 (76%), Gaps = 4/1152 (0%)

Query: 12   GPPLPLGPLIGFSVAILAVVLIALFTWEASVSRGLAANAVSHTMKVREQLQVLVSTLKDA 71
            GP LP     GF VA LAV+LIA+ ++ +   R      V+HT++V E+L+ L+S +KDA
Sbjct: 21   GPVLPPAIFAGFVVAALAVLLIAVLSYRSLQDRLSTGELVTHTLEVVERLEALLSLVKDA 80

Query: 72   ETSQRGFLLTGTESYLSPYNQARAALPGEIARLRELLSDNPDQLQRLSQIERVVADKLEE 131
            ET QRGFLLTG +SYL PY+ A  A+PG++  L+ELLSDNP Q +RL ++ER++  K+ E
Sbjct: 81   ETGQRGFLLTGVDSYLDPYSSAEMAIPGQLKHLQELLSDNPLQQRRLVEVERIIVGKMGE 140

Query: 132  LAETVSRRRNGDTAGALAVVQSDRGKMFMDRVRVLSRDMEEQERDLLASRQSDWRDAVVF 191
            L +T+  R+ G +  ALA+V++D+GK+ MDR+R    +ME +ER LL++R  + + A   
Sbjct: 141  LNDTIKLRQAGKSEAALALVRTDKGKVLMDRIRGTIEEMEREERGLLSTRNLELQQAATN 200

Query: 192  STAVAWGGSGLLLVLIIAAAMTTSRDYRAREKQTWIRNGQMGLAERLQGEQRLGALGENT 251
            S  + W GS LLLVLI AA   TSRD+R R  + W++ GQ  L  R+QG+QRL  LGEN 
Sbjct: 201  SLLITWAGSLLLLVLIGAAGYMTSRDFRTRSIEAWLQAGQASLGGRMQGDQRLTQLGENV 260

Query: 252  LAFLTAYLNAQVGAIYLRTDSGDFQRFAAYALEEDASEQPPHLRDGQGLLGQAAKLNRAM 311
            L FLT YLNAQV AIYL   +G F+RFA YAL      Q   +R G+GLLGQA +  R  
Sbjct: 261  LQFLTGYLNAQVAAIYLAEPTGTFRRFAGYALPPALEGQTETIRPGEGLLGQAIREQRVF 320

Query: 312  HVKEVPAQYLTVSSSVGRHAPRELLIVPAAADGVVQAVFELGFLRQVRAEEEELLARLSD 371
            H+K+VP  YL++S+S+ R  PR LL+VPA  DG V AV ELGF+  V   + E L R+S+
Sbjct: 321  HLKDVPTDYLSISTSLSRGTPRHLLVVPARVDGGVNAVVELGFIHAVHPSDLEFLQRVSE 380

Query: 372  QIAIAVRSSKDRTRLEELLEETQRQSEELQAQQEELRVNNEELEEQGQALKASQLRLETQ 431
             I IAVRSS DRTRLE+LLEETQRQ+EELQAQQEELRV+NEE+EEQ + LK SQ+R+E Q
Sbjct: 381  SIGIAVRSSHDRTRLEQLLEETQRQTEELQAQQEELRVSNEEIEEQSRVLKESQVRMEAQ 440

Query: 432  QAELEETNAQLEEQTQLLEIQKDDLAKTQVVLVEKATELERANQYKSEFLANMSHELRTP 491
            QAELE+TN QLEEQTQLL  QKDDL   Q  L +KA+ELER ++YKSEFLANMSHELRTP
Sbjct: 441  QAELEQTNVQLEEQTQLLAKQKDDLTNAQGTLAQKASELERTSRYKSEFLANMSHELRTP 500

Query: 492  LNSTLILAKLLADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSKMEAGKLDIVSE 551
            LNS+LILAKLLADNK+GNL+ EQV+FAQTISSAGNDLLALINDILDLS++EAGK+++  E
Sbjct: 501  LNSSLILAKLLADNKEGNLTSEQVKFAQTISSAGNDLLALINDILDLSRIEAGKVEVQPE 560

Query: 552  SFVVSKMAEELKASFAMTAQQKGLGFKVEVEPGVPQRMETDMQRLGQILKNLLSNAIKFT 611
              ++ +  E L  +F   AQ+K LGF + V+  V +++ETD QR GQIL+NLLSNA KFT
Sbjct: 561  VVILRRTVEALLRTFQPVAQEKKLGFSISVQEDVAEKLETDPQRFGQILRNLLSNAFKFT 620

Query: 612  EKGEVSLRIYADAGGRIAFAVRDTGIGIGADQHQFIFEAFRQADGSTHRKYGGTGLGLSI 671
            EKGEVSLR++    G++ FAVRDTGIGI   Q + IFEAFRQADGSTHRKYGG+GLGLSI
Sbjct: 621  EKGEVSLRVFPVGPGKVGFAVRDTGIGIAPHQQELIFEAFRQADGSTHRKYGGSGLGLSI 680

Query: 672  SRDLAHLLGGDIQVQSRVGEGSIFTLSLPQVYSGEQAVMRTALPVPAAAAATLQAAQVAT 731
            SRDLA LLGG++ VQS+ GEGS FTL+LP V++   +    A   P  A A   +  V +
Sbjct: 681  SRDLARLLGGEVTVQSQPGEGSTFTLTLPVVFARAGSPAEGA-ATPGNAPAFSASPPVRS 739

Query: 732  APD--IRIPSPQVVPGT-PAKLQDIAIDDDRHRIESSSRLILVIEDDTAFAMILRDLAHE 788
             P   + +P P   P   P KL+   ++DDR RI + SR+ILV EDD  FA ILRDLA E
Sbjct: 740  VPGAPLGVPPPAGAPSVEPTKLELAGLEDDRERIATDSRVILVAEDDMRFAAILRDLARE 799

Query: 789  MGFQCVVTHSANEGVSAAEMYRPSAILMDMNLPDFSGLGVLDQIKRNPKTRHIPVHVVSV 848
            +GF C+VT +    ++AA  YRPSAIL+DMNLPD SGL VLDQ+KRN KTRHIPVHVVSV
Sbjct: 800  LGFLCIVTGTGGAALAAALSYRPSAILLDMNLPDHSGLAVLDQLKRNAKTRHIPVHVVSV 859

Query: 849  ADYSHEALERGAIGYALKPVQREELVGAIRKLEAKFLQGLRHVLVVEDDARQLDSIRQLL 908
            ADYS EALE GA+GYALKPV+RE+LV A RKLE KF QGLR VLV+EDD RQ +S+++LL
Sbjct: 860  ADYSREALELGAVGYALKPVKREQLVEAFRKLETKFSQGLRRVLVLEDDERQRESLQKLL 919

Query: 909  AGENINLVGVRTAADALARLRETTFDCMVMDLNLPDLSGYQLLEKMAEQEHVAFPPVIVY 968
              E++ +VGV TA +AL +L++ TFDCMVMDL+LPDLSG +LLEKMA QE V+FPPVIVY
Sbjct: 920  ESEDVQIVGVATAGEALQQLQQHTFDCMVMDLHLPDLSGDELLEKMALQEDVSFPPVIVY 979

Query: 969  TGRSLSAEEEQHLRRFSRSIIIKDARSPERLLDEVTLFLHQVETTLPPESQRMLKVARDR 1028
            TG SLS +EEQ LRRFSRSIIIK  RSPERLLDEVTLFLHQVE+ +PPE QRML+VARDR
Sbjct: 980  TGHSLSRDEEQRLRRFSRSIIIKGVRSPERLLDEVTLFLHQVESKMPPERQRMLQVARDR 1039

Query: 1029 ETVFEGRRILVVEDDVRNIFALSSVLEPKGMKVDIARNGREALEALQRSQEQPGAPIDLV 1088
            E   EGRRILVVEDDVRN+FALSSVLEP+G KV+IARNGREALEAL RS  QP   +DLV
Sbjct: 1040 EAALEGRRILVVEDDVRNVFALSSVLEPRGAKVEIARNGREALEALTRSLAQPAKSVDLV 1099

Query: 1089 LMDIMMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVE 1148
            LMDIMMPEMDG+TAMREIRK++ W +LPIIALTAKAM+DDQEKCLAAGANDYIAKPLDVE
Sbjct: 1100 LMDIMMPEMDGITAMREIRKRSEWSKLPIIALTAKAMRDDQEKCLAAGANDYIAKPLDVE 1159

Query: 1149 KLLSLVRVWMPK 1160
            KLLSL+RVWMPK
Sbjct: 1160 KLLSLIRVWMPK 1171


>ref|YP_004236356.1| multi-sensor hybrid histidine kinase [Acidovorax avenae subsp. avenae
            ATCC 19860]
 gb|ADX47789.1| multi-sensor hybrid histidine kinase [Acidovorax avenae subsp. avenae
            ATCC 19860]
          Length = 1160

 Score = 1235 bits (3195), Expect = 0.0,   Method: Composition-based stats.
 Identities = 705/1149 (61%), Positives = 862/1149 (75%), Gaps = 6/1149 (0%)

Query: 15   LPLGPLIGFSVAILAVVLIALFTWEASVSRGLAANAVSHTMKVREQLQVLVSTLKDAETS 74
            +PL  L+GF +A LA  +IA+FT+++   RG A   ++  ++   Q+Q ++S LKDAET 
Sbjct: 15   MPLRMLLGFVLAALATTVIAVFTYQSQQDRGEAVRRINAAVESIVQIQYVLSILKDAETG 74

Query: 75   QRGFLLTGTESYLSPYNQARAALPGEIARLRELLSDNPDQLQRLSQIERVVADKLEELAE 134
            QRG+LL G   YL PY  A A+L  E+ RLR L+ D+P QL+R  Q+  +   K+ EL E
Sbjct: 75   QRGYLLAGEPRYLGPYETAEASLTTELERLRGLVGDSPRQLRRFEQLAPLARQKMSELHE 134

Query: 135  TVSRRRNGDTAGALAVVQSDRGKMFMDRVRVLSRDMEEQERDLLASRQSDWRDAVVFSTA 194
            T+  R +G    ALAVV++DRG+  MD +R L R+M   ER+ L  R++ W D+  F+  
Sbjct: 135  TIQLRLSGQADAALAVVRTDRGRATMDAIRSLVREMIAAEREELEERRAMWEDSARFAAY 194

Query: 195  VAWGGSGLLLVLIIAAAMTTSRDYRAREKQTWIRNGQMGLAERLQGEQRLGALGENTLAF 254
              WG S LLLV I+  A  T+ D+R + ++ W+R+G MGL++ ++G+ RL  LG   LA+
Sbjct: 195  FTWGSSLLLLVFILGVAAMTAADHRTKAREAWVRSGLMGLSDEIRGDLRLDELGPRVLAY 254

Query: 255  LTAYLNAQVGAIYLRTDSGDFQRFAAYALEEDASEQPPHLRDGQGLLGQAAKLNRAMHVK 314
            L   L A+VGA Y+    G F+RF AYAL   +   P  +  G+GL+GQ A+  + +H +
Sbjct: 255  LARRLGARVGAAYVSDGHGTFRRFGAYAL---SGSGPERIATGEGLVGQVAQTLQPVHAR 311

Query: 315  EVPAQYLTVSSSVGRHAPRELLIVPAAADGVVQAVFELGFLRQVRAEEEELLARLSDQIA 374
             VPA +L V S VG   P EL+++PA  +GVVQAV ELGF R V+  + ++L+R S+Q+A
Sbjct: 312  HVPASHLEVQSGVGHSTPAELVVLPAVHNGVVQAVIELGFFRPVQPIDMDMLSRASEQLA 371

Query: 375  IAVRSSKDRTRLEELLEETQRQSEELQAQQEELRVNNEELEEQGQALKASQLRLETQQAE 434
            IAVRS+ DRT+LE LL+ETQRQ+EELQAQQEELRV+NEELE+Q + L+ SQ ++E QQ E
Sbjct: 372  IAVRSAIDRTQLEALLDETQRQAEELQAQQEELRVSNEELEQQSRVLQESQAQMEAQQTE 431

Query: 435  LEETNAQLEEQTQLLEIQKDDLAKTQVVLVEKATELERANQYKSEFLANMSHELRTPLNS 494
            LE++NAQLEEQTQ LE QK  L + Q  L +KA +LE+A+QYKSEFLANMSHELRTPLNS
Sbjct: 432  LEQSNAQLEEQTQQLEYQKQQLLRAQDALSDKARDLEQASQYKSEFLANMSHELRTPLNS 491

Query: 495  TLILAKLLADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSKMEAGKLDIVSESFV 554
            +LILAKLLADNK GNL+DEQVR+A+TI  AGNDLL LINDILDL+K+EAG+  +  E   
Sbjct: 492  SLILAKLLADNKGGNLTDEQVRYAETIHGAGNDLLTLINDILDLAKIEAGQATVDIEPVN 551

Query: 555  VSKMAEELKASFAMTAQQKGLGFKVEVEPGVPQRMETDMQRLGQILKNLLSNAIKFTEKG 614
            V++  + +       A++K L F   VEPGVP  + TD QRLGQILKNLLSNAIKFTE+G
Sbjct: 552  VARAVQSIVEPLRPLAREKNLAFSAVVEPGVPDVLRTDAQRLGQILKNLLSNAIKFTERG 611

Query: 615  EVSLRIYADAGGRIAFAVRDTGIGIGADQHQFIFEAFRQADGSTHRKYGGTGLGLSISRD 674
            EV+LR+ A   GR+AF+VRDTGIGI   Q + IFEAFRQADGSTHRKYGGTGLGLSISRD
Sbjct: 612  EVALRVAAQPDGRVAFSVRDTGIGIPDHQQKLIFEAFRQADGSTHRKYGGTGLGLSISRD 671

Query: 675  LAHLLGGDIQVQSRVGEGSIFTLSLP-QVYSGEQAVMRTALPVPAA-AAATLQAAQVATA 732
            LA LLGG + VQS  G+GS+FTL LP Q   G QA  + A PVP   A AT  A  V+  
Sbjct: 672  LAQLLGGSVSVQSTSGQGSVFTLVLPLQPPEGAQAAGQAAAPVPPQRAVATASATPVSAL 731

Query: 733  P-DIRIPSPQVVPGTPAKLQDIAIDDDRHRIESSSRLILVIEDDTAFAMILRDLAHEMGF 791
            P ++           P +    A+ DDR  +++  R ILV+EDDT FA IL DLAHEMGF
Sbjct: 732  PAEVAEQPALAPMPAPPRRPASAVADDRDALQAGKRTILVVEDDTRFARILYDLAHEMGF 791

Query: 792  QCVVTHSANEGVSAAEMYRPSAILMDMNLPDFSGLGVLDQIKRNPKTRHIPVHVVSVADY 851
            QC+VTHS  EG++AA  Y PSA+++DMNLPDFSGLGVLDQ+KRNP TRHIPVHVVSVADY
Sbjct: 792  QCIVTHSGGEGLAAATDYMPSAVVLDMNLPDFSGLGVLDQLKRNPATRHIPVHVVSVADY 851

Query: 852  SHEALERGAIGYALKPVQREELVGAIRKLEAKFLQGLRHVLVVEDDARQLDSIRQLLAGE 911
            S EAL  GA+GYALKPV+R+ELV A++++EAKF Q LR VLVVEDD RQ +S+R LLA  
Sbjct: 852  SQEALGLGAMGYALKPVKRDELVQALQRMEAKFTQALRRVLVVEDDDRQRESMRHLLANG 911

Query: 912  NINLVGVRTAADALARLRETTFDCMVMDLNLPDLSGYQLLEKMAEQEHVAFPPVIVYTGR 971
            ++ +VG  TA  AL  LRE+TFDCMVMDLNLPDLSGY+LLE+MA QE VAFPPVIVYTGR
Sbjct: 912  DVEIVGAETAQRALQLLRESTFDCMVMDLNLPDLSGYELLEQMAGQEEVAFPPVIVYTGR 971

Query: 972  SLSAEEEQHLRRFSRSIIIKDARSPERLLDEVTLFLHQVETTLPPESQRMLKVARDRETV 1031
            SLS +EEQ LRRFS+SIIIKDARSPERLLDEVTLFLHQVE++LP E Q+ML++ARDRE  
Sbjct: 972  SLSRDEEQRLRRFSKSIIIKDARSPERLLDEVTLFLHQVESSLPAERQQMLRLARDREAT 1031

Query: 1032 FEGRRILVVEDDVRNIFALSSVLEPKGMKVDIARNGREALEALQRSQEQPGAPIDLVLMD 1091
            FEGR ILVVEDDVRNIFALSSVLEP G KV IARNGREALEAL+RSQ      +DLVLMD
Sbjct: 1032 FEGRSILVVEDDVRNIFALSSVLEPTGAKVQIARNGREALEALERSQSGDAPQVDLVLMD 1091

Query: 1092 IMMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKLL 1151
            IMMPEMDG TAMREIRK+  W+RLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKLL
Sbjct: 1092 IMMPEMDGFTAMREIRKRQEWRRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKLL 1151

Query: 1152 SLVRVWMPK 1160
            SLVRVWMPK
Sbjct: 1152 SLVRVWMPK 1160


>ref|YP_972312.1| multi-sensor hybrid histidine kinase [Acidovorax citrulli AAC00-1]
 gb|ABM34538.1| multi-sensor hybrid histidine kinase [Acidovorax citrulli AAC00-1]
          Length = 1159

 Score = 1220 bits (3156), Expect = 0.0,   Method: Composition-based stats.
 Identities = 693/1148 (60%), Positives = 856/1148 (74%), Gaps = 5/1148 (0%)

Query: 15   LPLGPLIGFSVAILAVVLIALFTWEASVSRGLAANAVSHTMKVREQLQVLVSTLKDAETS 74
            +PL  L+GF +A LA  +IA+FT+++   RG A   ++  ++   Q+Q ++S +KDAET 
Sbjct: 15   MPLRMLLGFVLAALATTVIAVFTYQSQQDRGEAVRRINSAVESIVQIQYVLSIIKDAETG 74

Query: 75   QRGFLLTGTESYLSPYNQARAALPGEIARLRELLSDNPDQLQRLSQIERVVADKLEELAE 134
            QRG+LL G   YL PY  A A+L  E+ RLR L+ D+P QL+R  Q+  +   K+ EL E
Sbjct: 75   QRGYLLAGEPRYLGPYETAEASLTTELERLRGLVGDSPRQLRRYEQLAPLARQKMSELHE 134

Query: 135  TVSRRRNGDTAGALAVVQSDRGKMFMDRVRVLSRDMEEQERDLLASRQSDWRDAVVFSTA 194
            T+  R +G    AL+VV++DRG+  MD +R L R+M   ER+ L  R++ W D+  F+  
Sbjct: 135  TIQLRLSGQADAALSVVRTDRGRATMDAIRSLVREMIAAEREELEERRAMWEDSARFAAY 194

Query: 195  VAWGGSGLLLVLIIAAAMTTSRDYRAREKQTWIRNGQMGLAERLQGEQRLGALGENTLAF 254
              WG S LLLV I+  A  T+ D+RA+ ++ W+R+G MGL++ ++G+ RL  LG   LA+
Sbjct: 195  FTWGSSLLLLVFILGVAAMTAADHRAKAREAWVRSGLMGLSDEVRGDLRLDELGPRVLAY 254

Query: 255  LTAYLNAQVGAIYLRTDSGDFQRFAAYALEEDASEQPPHLRDGQGLLGQAAKLNRAMHVK 314
            L   L A+VGA Y+    G F+RF AYAL   +   P  +  G+GL+GQ A+  + +H +
Sbjct: 255  LARRLGARVGAAYVSDGHGTFRRFGAYAL---SGTGPERIAVGEGLVGQVAQTLQPVHAR 311

Query: 315  EVPAQYLTVSSSVGRHAPRELLIVPAAADGVVQAVFELGFLRQVRAEEEELLARLSDQIA 374
             VPA +L V S VG   P EL+++PA  +GVV AV ELGF R V+  + ++L+R S+Q+A
Sbjct: 312  HVPASHLEVQSGVGHSTPAELVVLPAVHNGVVHAVIELGFFRPVQPIDMDMLSRASEQLA 371

Query: 375  IAVRSSKDRTRLEELLEETQRQSEELQAQQEELRVNNEELEEQGQALKASQLRLETQQAE 434
            +AVRS+ DR++LE LL+ETQRQ+EELQAQQEELRV+NEELE+Q + L+ SQ ++E QQ E
Sbjct: 372  VAVRSAIDRSQLEALLDETQRQAEELQAQQEELRVSNEELEQQSRVLQESQAQMEAQQTE 431

Query: 435  LEETNAQLEEQTQLLEIQKDDLAKTQVVLVEKATELERANQYKSEFLANMSHELRTPLNS 494
            LE++NAQLEEQTQ LE QK  L + Q  L +KA +LE+A+QYKSEFLANMSHELRTPLNS
Sbjct: 432  LEQSNAQLEEQTQQLEYQKQQLLRAQDALSDKARDLEQASQYKSEFLANMSHELRTPLNS 491

Query: 495  TLILAKLLADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSKMEAGKLDIVSESFV 554
            +LILAKLLADNK GNL++EQVR+A+TI  AGNDLL LINDILDL+K+EAG+  +  E   
Sbjct: 492  SLILAKLLADNKGGNLTEEQVRYAETIHGAGNDLLNLINDILDLAKIEAGQATVEIEPVN 551

Query: 555  VSKMAEELKASFAMTAQQKGLGFKVEVEPGVPQRMETDMQRLGQILKNLLSNAIKFTEKG 614
            V++  + +       A++K L F   VEPGVP  + TD QRLGQILKNLLSNAIKFTE+G
Sbjct: 552  VARAVQSIVEPLRPLAREKNLAFSAVVEPGVPDVLRTDAQRLGQILKNLLSNAIKFTERG 611

Query: 615  EVSLRIYADAGGRIAFAVRDTGIGIGADQHQFIFEAFRQADGSTHRKYGGTGLGLSISRD 674
            EV+LR+ A   GR+AF+VRDTGIGI   Q + IFEAFRQADGSTHRKYGGTGLGLSISRD
Sbjct: 612  EVALRVAAQPDGRVAFSVRDTGIGIPEHQQKLIFEAFRQADGSTHRKYGGTGLGLSISRD 671

Query: 675  LAHLLGGDIQVQSRVGEGSIFTLSLPQVYSGEQAVMRTALPVPAAAAATLQAAQVATAPD 734
            LA LLGG + VQS  G+GS+FTL LP            A       A    +A  A+A  
Sbjct: 672  LAQLLGGSVSVQSTSGQGSVFTLVLPVHAPESSQPAAQAPAPAPQLAVATASATPASALP 731

Query: 735  IRIPSPQVVPGTPAKLQDI--AIDDDRHRIESSSRLILVIEDDTAFAMILRDLAHEMGFQ 792
              +P    +   PA  +    A+ DDR  +++  R ILV+EDDT FA IL DLAHEMGFQ
Sbjct: 732  AEVPEQPALAPMPAPPRRPASAVADDRDALQAGRRTILVVEDDTRFARILYDLAHEMGFQ 791

Query: 793  CVVTHSANEGVSAAEMYRPSAILMDMNLPDFSGLGVLDQIKRNPKTRHIPVHVVSVADYS 852
            C+VTHS  EG++AA  Y PSA+++DMNLPDFSGLGVLDQ+KRNP TRHIPVHVVSVADYS
Sbjct: 792  CIVTHSGGEGLAAATDYMPSAVVLDMNLPDFSGLGVLDQLKRNPATRHIPVHVVSVADYS 851

Query: 853  HEALERGAIGYALKPVQREELVGAIRKLEAKFLQGLRHVLVVEDDARQLDSIRQLLAGEN 912
             EAL  GA+GYALKPV+R+ELV A++++EAKF Q LR VLVVEDD RQ +S+R LLA  +
Sbjct: 852  QEALGLGAMGYALKPVKRDELVQALQRMEAKFTQALRRVLVVEDDDRQRESMRHLLANGD 911

Query: 913  INLVGVRTAADALARLRETTFDCMVMDLNLPDLSGYQLLEKMAEQEHVAFPPVIVYTGRS 972
            + +VG  TA  AL  LRE+TFDCMVMDLNLPDLSGY+LLE+MA QE VAFPPVIVYTGRS
Sbjct: 912  VEIVGAETAQRALQLLRESTFDCMVMDLNLPDLSGYELLEQMAGQEEVAFPPVIVYTGRS 971

Query: 973  LSAEEEQHLRRFSRSIIIKDARSPERLLDEVTLFLHQVETTLPPESQRMLKVARDRETVF 1032
            LS +EEQ LRRFS+SIIIKDARSPERLLDEVTLFLHQVE++LP E Q+ML++ARDRE+ F
Sbjct: 972  LSRDEEQRLRRFSKSIIIKDARSPERLLDEVTLFLHQVESSLPAERQQMLRLARDRESTF 1031

Query: 1033 EGRRILVVEDDVRNIFALSSVLEPKGMKVDIARNGREALEALQRSQEQPGAPIDLVLMDI 1092
            EGR ILVVEDDVRNIFALSSVLEP G KV IARNGREALEAL+RSQ      +DLVLMDI
Sbjct: 1032 EGRSILVVEDDVRNIFALSSVLEPTGAKVQIARNGREALEALERSQAGDAPQVDLVLMDI 1091

Query: 1093 MMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKLLS 1152
            MMPEMDG TAMREIRK+  W+RLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKLLS
Sbjct: 1092 MMPEMDGFTAMREIRKRQEWRRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKLLS 1151

Query: 1153 LVRVWMPK 1160
            LVRVWMPK
Sbjct: 1152 LVRVWMPK 1159


>ref|YP_002552106.1| histidine kinase [Acidovorax ebreus TPSY]
 gb|ACM32106.1| histidine kinase [Acidovorax ebreus TPSY]
          Length = 1137

 Score = 1135 bits (2935), Expect = 0.0,   Method: Composition-based stats.
 Identities = 652/1152 (56%), Positives = 825/1152 (71%), Gaps = 21/1152 (1%)

Query: 15   LPLGPLIGFSVAILAVVLIALFTWEASVSRGLAANAVSHTMKVREQLQVLVSTLKDAETS 74
            +P+  L+GF++A  A +LIA+ T+ ++  R  A + ++ T++   Q+Q++ S LKDAE++
Sbjct: 1    MPVRLLVGFALAAFAALLIAVLTYRSNDERAKAVDNLNATVERITQIQMVWSHLKDAESA 60

Query: 75   QRGFLLTGTESYLSPYNQARAALPGEIARLRELLSDNPDQLQRLSQIERVVADKLEELAE 134
            +RG+LL+G E  L  +  A+AA+P  + +LR +   +  + QR  Q++ +   ++ ELA 
Sbjct: 61   KRGYLLSGQEQTLGLFTVAQAAVPVALEKLRGMTRGSLLEQQRFDQLQGLATKRMTELAH 120

Query: 135  TVSRRRNGDTAGALAVVQSDRGKMFMDRVRVLSRDMEEQERDLLASRQSDWRDAVVFSTA 194
             V+ +R G    AL  ++ D G+  M+  R L R+M   E+  L +++  W  A   S  
Sbjct: 121  IVALQREGRREEALEAMRGD-GQATMETTRTLVREMLNTEQQQLQAQREVWEGAFGISAY 179

Query: 195  VAWGGSGLLLVLIIAAAMTTSRDYRAREKQTWIRNGQMGLAERLQGEQRLGALGENTLAF 254
            + WG + +LL+L  A+A+ T  +YR+RE + WI+   + L  RLQGEQR+  +    + +
Sbjct: 180  LTWGSAAVLLLLTCASAVMTMAEYRSREVENWIKGNLVRLGTRLQGEQRIHDMAGAVIGY 239

Query: 255  LTAYLNAQVGAIYLRTDSGDFQRFAAYALEEDASEQPPHLRDGQGLLGQAAKLNRAMHVK 314
            L   L+A+VGAIY+    G F+R   YAL  D    P  +R G+GLLGQA +     HV+
Sbjct: 240  LATELDARVGAIYVTQGHGVFERMGGYALAPDTG--PAAVRAGEGLLGQALQSRTLQHVR 297

Query: 315  EVPAQYLTVSSSVGRHAPRELLIVPAAADGVVQAVFELGFLRQVRAEEEELLARLSDQIA 374
             VP+ YL V+S  G+  P EL+++P   +GV  AV E+G+ R V   E + L R  +Q+A
Sbjct: 298  HVPSGYLPVTSGTGQATPAELVMMPIVLNGVALAVVEMGWFRTVAPHEVDFLVRAGEQLA 357

Query: 375  IAVRSSKDRTRLEELLEETQRQSEELQAQQEELRVNNEELEEQGQALKASQLRLETQQAE 434
             AVR + DR+RLE LL+ETQRQ+EELQAQQEELRVNNEELE+Q + L+ SQ  ++ QQAE
Sbjct: 358  QAVRGALDRSRLESLLDETQRQAEELQAQQEELRVNNEELEQQSRMLQESQNLMQAQQAE 417

Query: 435  LEETNAQLEEQTQLLEIQKDDLAKTQVVLVEKATELERANQYKSEFLANMSHELRTPLNS 494
            LE +NAQLE QT+ L+ QK  L   Q  L  KA +L +A+QYKSEFLANMSHELRTPLNS
Sbjct: 418  LEHSNAQLEAQTEQLQYQKQRLLTAQDALEAKARDLAQASQYKSEFLANMSHELRTPLNS 477

Query: 495  TLILAKLLADNKQGNLSDEQVRFAQTISSAGNDLLALINDILDLSKMEAGKLDIVSESFV 554
            +LILAKLLADNKQ NL+ EQVR+AQTI +AG DLL LINDILDLSK+EAG+  +      
Sbjct: 478  SLILAKLLADNKQQNLTAEQVRYAQTIHNAGTDLLNLINDILDLSKIEAGQTSVEIGQVT 537

Query: 555  VSKMAEELKASFAMTAQQKGLGFKVEVEPGVPQRMETDMQRLGQILKNLLSNAIKFTEKG 614
            V+K+   +       AQ KGL F   VEPGVP  + +D QRL QILKNLLSNA+KFT +G
Sbjct: 538  VAKVVAGVMEPLRAQAQDKGLQFNAVVEPGVPAFITSDAQRLAQILKNLLSNALKFTARG 597

Query: 615  EVSLRIYADAGGRIAFAVRDTGIGIGADQHQFIFEAFRQADGSTHRKYGGTGLGLSISRD 674
            EV+LR++A     + FAVRDTGIGI  DQ + IF+AF QADGSTHRKYGGTGLGLSISRD
Sbjct: 598  EVTLRVFAGDNDTLCFAVRDTGIGIAPDQQERIFDAFHQADGSTHRKYGGTGLGLSISRD 657

Query: 675  LAHLLGGDIQVQSRVGEGSIFTLSLPQVY-----SGEQAVMRTALPVPAAAAATLQAAQV 729
            LA LLGG I VQS  GEGS+FTL+LP        +GE+       P PA  AA    A  
Sbjct: 658  LAQLLGGSIAVQSAPGEGSVFTLTLPVTAPLLSDAGERQAKMPVAPTPAGRAAEPPHASQ 717

Query: 730  ATAPDIRIPSP-QVVPGTPAKLQDIAIDDDRHRIESSSRLILVIEDDTAFAMILRDLAHE 788
              AP  +  +P  VVP            DDR ++E     ILVIEDD  FA IL DLAHE
Sbjct: 718  PEAPAAKPCAPVHVVP------------DDREQLEQGRYTILVIEDDPRFARILCDLAHE 765

Query: 789  MGFQCVVTHSANEGVSAAEMYRPSAILMDMNLPDFSGLGVLDQIKRNPKTRHIPVHVVSV 848
            MGFQCV+  + ++G++AA  Y PSA+++DMNLPDFSGLGVLDQ+KRNP TRHIPVHVVSV
Sbjct: 766  MGFQCVIASTGSDGLAAALEYGPSAVVLDMNLPDFSGLGVLDQLKRNPATRHIPVHVVSV 825

Query: 849  ADYSHEALERGAIGYALKPVQREELVGAIRKLEAKFLQGLRHVLVVEDDARQLDSIRQLL 908
            ADY  EA+ERGAIGYALKPV+REEL  A+  ++AKF Q +R VLVVEDDARQ +S+  LL
Sbjct: 826  ADYMQEAMERGAIGYALKPVKREELEQALLHMQAKFTQSMRRVLVVEDDARQRESVHHLL 885

Query: 909  AGENINLVGVRTAADALARLRETTFDCMVMDLNLPDLSGYQLLEKMAEQEHVAFPPVIVY 968
            A + + +VG  TA  AL  L+ +TFDC+VMDL+LPDL+GY+LL++MAEQE V+FPPVIVY
Sbjct: 886  ATDGVEIVGAATARQALDLLKGSTFDCVVMDLHLPDLNGYELLQQMAEQEEVSFPPVIVY 945

Query: 969  TGRSLSAEEEQHLRRFSRSIIIKDARSPERLLDEVTLFLHQVETTLPPESQRMLKVARDR 1028
            TGR+LS +EEQ LRRFS+SIIIKDARSPERLLDEVTLFLHQVE+TLP + +RML++ARDR
Sbjct: 946  TGRNLSRDEEQQLRRFSKSIIIKDARSPERLLDEVTLFLHQVESTLPDDRRRMLQLARDR 1005

Query: 1029 ETVFEGRRILVVEDDVRNIFALSSVLEPKGMKVDIARNGREALEALQRSQEQPGAPIDLV 1088
            E+ FEGR ILVVEDDVRN+FALSSVLEP G +V+IARNGREALEAL+RS     + +DLV
Sbjct: 1006 ESTFEGRTILVVEDDVRNVFALSSVLEPTGARVEIARNGREALEALERSNAAGESAVDLV 1065

Query: 1089 LMDIMMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVE 1148
            LMDIMMPEMDG  AM EIR++  W+RLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVE
Sbjct: 1066 LMDIMMPEMDGFAAMAEIRRRPEWRRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVE 1125

Query: 1149 KLLSLVRVWMPK 1160
            KLLSLVRVWMPK
Sbjct: 1126 KLLSLVRVWMPK 1137