BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4227.p (246 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776757.1| membrane protein [Herbaspirillum seropedicae... 258 7e-67 ref|YP_001352292.1| hypothetical protein mma_0602 [Janthinobacte... 172 3e-41 ref|YP_004754349.1| hypothetical protein CFU_3702 [Collimonas fu... 171 9e-41 ref|YP_001098960.1| putative signal peptide [Herminiimonas arsen... 169 4e-40 ref|ZP_04577894.1| conserved hypothetical protein [Oxalobacter f... 154 2e-35 >ref|YP_003776757.1| membrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64849.1| membrane protein [Herbaspirillum seropedicae SmR1] Length = 177 Score = 258 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 146/177 (82%), Positives = 157/177 (88%) Query: 70 MANNNASPSLFARLLRHLRMTRAAARRIFPSSTLKAIQASIGEGERQHRAQVRVIVEAAL 129 M +NN SPSL ARLL HLRMTRAAARR FPS+TLKAIQASIG GER+HRAQVRVIVEAAL Sbjct: 1 MPHNNTSPSLPARLLHHLRMTRAAARRAFPSTTLKAIQASIGAGEREHRAQVRVIVEAAL 60 Query: 130 TLGAVRRGESARQRAHELFSLYRIWDTEENCGVLVYVNLADRKVEIVADRGINACVTREQ 189 +LGAVRRG+SARQRAHELFS YRIWDTEENCGVLVY+NLADRKVEIVADRG+NA VTREQ Sbjct: 61 SLGAVRRGDSARQRAHELFSHYRIWDTEENCGVLVYINLADRKVEIVADRGVNARVTREQ 120 Query: 190 WQQVCRQMTAGYARGDYEASTLQALAALHALLESVLPRRNDGNAKATNELSDKPLLL 246 WQQVCR MTAGYA+G+YEASTLQALA+LH +L VLPR D NELSDKPLLL Sbjct: 121 WQQVCRAMTAGYAQGEYEASTLQALASLHEILRKVLPREPDAAGDMHNELSDKPLLL 177 >ref|YP_001352292.1| hypothetical protein mma_0602 [Janthinobacterium sp. Marseille] gb|ABR90344.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 166 Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 84/167 (50%), Positives = 116/167 (69%), Gaps = 4/167 (2%) Query: 80 FARLLRHLRMTRAAARRIFPSSTLKAIQASIGEGERQHRAQVRVIVEAALTLGAVRRGES 139 F+R LRHL TR + ++ FP +TL AIQ +I GE HRA++R+IVE +L A+ G S Sbjct: 4 FSRALRHLTTTRYSGKKAFPCATLTAIQKAIAAGESAHRAEIRLIVEPSLEFSAIVAGLS 63 Query: 140 ARQRAHELFSLYRIWDTEENCGVLVYVNLADRKVEIVADRGINACVTREQWQQVCRQMTA 199 +R RAHELFS YRIWDTEENCG+L+Y++LAD +VEIVADRGI+ + + W VC+ MT+ Sbjct: 64 SRARAHELFSQYRIWDTEENCGILIYIDLADHQVEIVADRGISRLIPQHHWHAVCKTMTS 123 Query: 200 GYARGDYEASTLQALAALHALLESVLPRRNDGNAKATNELSDKPLLL 246 G+A+G+Y S + + L+A L+ P N N+LS+KP+LL Sbjct: 124 GFAKGEYHDSVIAGIQQLNAALQEHFPE----NGAQANQLSNKPILL 166 >ref|YP_004754349.1| hypothetical protein CFU_3702 [Collimonas fungivorans Ter331] gb|AEK63526.1| conserved hypothetical protein; putative signal peptide [Collimonas fungivorans Ter331] Length = 168 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 92/165 (55%), Positives = 115/165 (69%), Gaps = 4/165 (2%) Query: 82 RLLRHLRMTRAAARRIFPSSTLKAIQASIGEGERQHRAQVRVIVEAALTLGAVRRGESAR 141 R+ RHL TR +ARR FP++TLKAIQ I +GE HRA+V++IVE +L+L AV G ++R Sbjct: 8 RIWRHLLTTRRSARRAFPATTLKAIQQKIADGEVTHRAEVKMIVEGSLSLPAVLNGVTSR 67 Query: 142 QRAHELFSLYRIWDTEENCGVLVYVNLADRKVEIVADRGINACVTREQWQQVCRQMTAGY 201 RAHELFS YRIWDTEEN GVL+YVNLAD KVEI+ DR I +WQ VC+ MT + Sbjct: 68 NRAHELFSHYRIWDTEENVGVLLYVNLADHKVEIIVDRAIGRATKSAEWQAVCKTMTKEF 127 Query: 202 ARGDYEASTLQALAALHALLESVLPRRNDGNAKATNELSDKPLLL 246 A G + STL AL ++ +L P ++G K NELSDKPLLL Sbjct: 128 ANGAFHDSTLAALEQMNDMLTQHFP--DEGRKK--NELSDKPLLL 168 >ref|YP_001098960.1| putative signal peptide [Herminiimonas arsenicoxydans] emb|CAL60833.1| Conserved hypothetical protein; putative exported protein [Herminiimonas arsenicoxydans] Length = 170 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 81/167 (48%), Positives = 110/167 (65%) Query: 80 FARLLRHLRMTRAAARRIFPSSTLKAIQASIGEGERQHRAQVRVIVEAALTLGAVRRGES 139 F+R LRH T++ ++ FPS+TL AIQ I GE QHRA++R+IVE +L L V G + Sbjct: 4 FSRALRHAGTTKSHGKKAFPSATLSAIQTIIAAGETQHRAEIRLIVEPSLDLTEVLSGMT 63 Query: 140 ARQRAHELFSLYRIWDTEENCGVLVYVNLADRKVEIVADRGINACVTREQWQQVCRQMTA 199 +R+RA ELF+ Y IWDTEENCG+L+Y+NLAD +VEI+ADRGI V W VC+ MT Sbjct: 64 SRERARELFTHYHIWDTEENCGILIYINLADHQVEIIADRGIARLVPPADWHAVCKTMTD 123 Query: 200 GYARGDYEASTLQALAALHALLESVLPRRNDGNAKATNELSDKPLLL 246 G+A+ +Y S L L L+ LL+ P N+LS++P+LL Sbjct: 124 GFAQKNYHDSVLNGLQQLNTLLQKYFPEGESPQGPQPNQLSNQPILL 170 >ref|ZP_04577894.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gb|EEO28856.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 166 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 76/167 (45%), Positives = 103/167 (61%), Gaps = 4/167 (2%) Query: 80 FARLLRHLRMTRAAARRIFPSSTLKAIQASIGEGERQHRAQVRVIVEAALTLGAVRRGES 139 F RL HL ARR F S+TL I+ I GE+ HRA++RVI+E AL+ + + + Sbjct: 4 FQRLFHHLATPSFVARRAFSSATLTEIENIIATGEKMHRAEIRVIIETALSFSEIIKKKL 63 Query: 140 ARQRAHELFSLYRIWDTEENCGVLVYVNLADRKVEIVADRGINACVTREQWQQVCRQMTA 199 +R RA ELF LY+IW+TEEN G+L+Y+NLADRKVEIV DRGIN V +WQ +C MT Sbjct: 64 SRTRALELFGLYKIWNTEENTGMLIYINLADRKVEIVTDRGINEKVPPVKWQTICTSMTQ 123 Query: 200 GYARGDYEASTLQALAALHALLESVLPRRNDGNAKATNELSDKPLLL 246 + + AL ++ +L++ P +N K TN L D PL+L Sbjct: 124 QFREKHFHDGIATALKEINGILQTHFPCKN----KRTNTLPDSPLIL 166