BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4224.p (214 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776754.1| orotidine 5'-phosphate decarboxylase [Herbas... 258 3e-67 ref|YP_004754346.1| orotidine 5'-phosphate decarboxylase [Collim... 237 9e-61 ref|ZP_08272824.1| Orotidine 5'-phosphate decarboxylase [Oxaloba... 224 6e-57 ref|YP_001098964.1| orotidine 5'-phosphate decarboxylase [Hermin... 223 2e-56 ref|YP_001352296.1| orotidine 5'-phosphate decarboxylase [Janthi... 221 4e-56 >ref|YP_003776754.1| orotidine 5'-phosphate decarboxylase [Herbaspirillum seropedicae SmR1] gb|ADJ64846.1| orotidine 5'-phosphate decarboxylase protein [Herbaspirillum seropedicae SmR1] Length = 272 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 127/137 (92%), Positives = 131/137 (95%), Gaps = 2/137 (1%) Query: 1 MGWDSVSPYLEWKDRGVIVLCRTSNAGGSDLQFLEVDGKPLYQHVARLVAEKWNTNGQCG 60 MGWDSVSPYLEWKDRGVIVLCRTSNAGGSDLQFLEVDGKPLYQHVARLVAEKWNTNGQCG Sbjct: 125 MGWDSVSPYLEWKDRGVIVLCRTSNAGGSDLQFLEVDGKPLYQHVARLVAEKWNTNGQCG 184 Query: 61 LVVGATFPHELAQVRAIIGDMPLLVPGVGAQGGDVQATVTSGKTASGTGMMINSSRAILY 120 LVVGATFP ELAQVRAIIGDMPLLVPGVGAQGGDVQATVT+GKTA+GTGMMINSSRAILY Sbjct: 185 LVVGATFPQELAQVRAIIGDMPLLVPGVGAQGGDVQATVTAGKTAAGTGMMINSSRAILY 244 Query: 121 AKPEDGEDYAGAGDARR 137 A P+ GED+A A ARR Sbjct: 245 ATPQAGEDFAAA--ARR 259 >ref|YP_004754346.1| orotidine 5'-phosphate decarboxylase [Collimonas fungivorans Ter331] gb|AEK63523.1| Orotidine 5'-phosphate decarboxylase [Collimonas fungivorans Ter331] Length = 275 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 117/139 (84%), Positives = 127/139 (91%), Gaps = 4/139 (2%) Query: 1 MGWDSVSPYLEWKDRGVIVLCRTSNAGGSDLQFLEVDGKPLYQHVARLVAEKWNTNGQCG 60 MG+DSV+PYLEWKDRG IVLCRTSNAGGSDLQFL VDG PLYQHVARLVA+KWNTNGQC Sbjct: 125 MGFDSVAPYLEWKDRGAIVLCRTSNAGGSDLQFLTVDGVPLYQHVARLVADKWNTNGQCA 184 Query: 61 LVVGATFPHELAQVRAIIGDMPLLVPGVGAQGGDVQATVTSGKTASGTGMMINSSRAILY 120 LVVGATFP ELAQVR+IIG+MPLLVPG+GAQGGD+QATV +GKTA+GTGMMINSSRAILY Sbjct: 185 LVVGATFPQELAQVRSIIGEMPLLVPGIGAQGGDIQATVNAGKTANGTGMMINSSRAILY 244 Query: 121 AKPED--GEDYAGAGDARR 137 AKP+ GEDYA A ARR Sbjct: 245 AKPDQAAGEDYAQA--ARR 261 >ref|ZP_08272824.1| Orotidine 5'-phosphate decarboxylase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33694.1| Orotidine 5'-phosphate decarboxylase [Oxalobacteraceae bacterium IMCC9480] Length = 274 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 111/137 (81%), Positives = 121/137 (88%), Gaps = 2/137 (1%) Query: 1 MGWDSVSPYLEWKDRGVIVLCRTSNAGGSDLQFLEVDGKPLYQHVARLVAEKWNTNGQCG 60 MG DS++PYLEWKDRGVIVLCRTSN GGSDLQFL+VDG PLYQ VARLVA+KWN+NGQC Sbjct: 125 MGHDSIAPYLEWKDRGVIVLCRTSNPGGSDLQFLQVDGTPLYQLVARLVADKWNSNGQCS 184 Query: 61 LVVGATFPHELAQVRAIIGDMPLLVPGVGAQGGDVQATVTSGKTASGTGMMINSSRAILY 120 LVVGATFPHELAQVRAI+G MPLLVPG+GAQGGDV ATV +G+TA GTGMMINSSRAILY Sbjct: 185 LVVGATFPHELAQVRAIVGTMPLLVPGIGAQGGDVAATVAAGQTADGTGMMINSSRAILY 244 Query: 121 AKPEDGEDYAGAGDARR 137 A P ED+A A ARR Sbjct: 245 ATPAQDEDFAQA--ARR 259 >ref|YP_001098964.1| orotidine 5'-phosphate decarboxylase [Herminiimonas arsenicoxydans] sp|A4G2V0|PYRF_HERAR RecName: Full=Orotidine 5'-phosphate decarboxylase; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase emb|CAL60837.1| Orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) [Herminiimonas arsenicoxydans] Length = 271 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 102/125 (81%), Positives = 119/125 (95%) Query: 1 MGWDSVSPYLEWKDRGVIVLCRTSNAGGSDLQFLEVDGKPLYQHVARLVAEKWNTNGQCG 60 MG+DSV PYLE +D+GVIVLCRTSNAGGSDLQFL+V G+PLYQHVA LVA+KWNTNGQC Sbjct: 125 MGFDSVQPYLERQDKGVIVLCRTSNAGGSDLQFLDVGGQPLYQHVAHLVADKWNTNGQCA 184 Query: 61 LVVGATFPHELAQVRAIIGDMPLLVPGVGAQGGDVQATVTSGKTASGTGMMINSSRAILY 120 LVVGATFP+ELAQVRAI+GDMPLL+PG+GAQGGD++ATV +G+TA+GTGMMINSSRAILY Sbjct: 185 LVVGATFPNELAQVRAIVGDMPLLIPGIGAQGGDIKATVEAGRTANGTGMMINSSRAILY 244 Query: 121 AKPED 125 AKP++ Sbjct: 245 AKPDE 249 >ref|YP_001352296.1| orotidine 5'-phosphate decarboxylase [Janthinobacterium sp. Marseille] sp|A6SVJ9|PYRF_JANMA RecName: Full=Orotidine 5'-phosphate decarboxylase; AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase gb|ABR88485.1| orotidine-5'-phosphate decarboxylase [Janthinobacterium sp. Marseille] Length = 271 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 103/125 (82%), Positives = 118/125 (94%) Query: 1 MGWDSVSPYLEWKDRGVIVLCRTSNAGGSDLQFLEVDGKPLYQHVARLVAEKWNTNGQCG 60 MG+DSV PYLE DRGVIVLCRTSNAGGSDLQFL VDGKPLYQHVA+LVA+KWNTNGQC Sbjct: 125 MGFDSVQPYLERPDRGVIVLCRTSNAGGSDLQFLNVDGKPLYQHVAQLVADKWNTNGQCA 184 Query: 61 LVVGATFPHELAQVRAIIGDMPLLVPGVGAQGGDVQATVTSGKTASGTGMMINSSRAILY 120 LVVGATFP+ELAQVRA++GDMPLL+PG+GAQGGD++ATV +G+TA+GTGMMINSSRAILY Sbjct: 185 LVVGATFPNELAQVRALVGDMPLLIPGIGAQGGDIKATVEAGRTANGTGMMINSSRAILY 244 Query: 121 AKPED 125 AK ++ Sbjct: 245 AKADE 249