BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4221.p (321 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776751.1| thiamine-monophosphate kinase [Herbaspirillu... 529 e-148 ref|YP_001352299.1| thiamine-monophosphate kinase [Janthinobacte... 413 e-113 ref|YP_004754343.1| Thiamine-monophosphate kinase [Collimonas fu... 402 e-110 ref|YP_001098967.1| thiamin-monophosphate kinase [Herminiimonas ... 395 e-108 ref|YP_585188.1| thiamine monophosphate kinase [Cupriavidus meta... 376 e-102 >ref|YP_003776751.1| thiamine-monophosphate kinase [Herbaspirillum seropedicae SmR1] gb|ADJ64843.1| thiamine-monophosphate kinase protein [Herbaspirillum seropedicae SmR1] Length = 321 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 287/321 (89%), Positives = 301/321 (93%) Query: 1 MLSEFELIARYFSRPPAPDSRTALGVGDDCALMTPAPGMQLAISSDMLVAGRHFFPDADP 60 MLSEFELIARYFSRPPAPDSRTALGVGDDCALMTPAPGMQLAISSDMLV GRHF PDADP Sbjct: 1 MLSEFELIARYFSRPPAPDSRTALGVGDDCALMTPAPGMQLAISSDMLVCGRHFLPDADP 60 Query: 61 LLLGHKCLAVNLSDLAAMGAQPIAFTLALALPEARADWLAPFSQGMLALADVHGCELIGG 120 LGHKCLAVNLSDLAAMGAQPIAFTLALALPEARADWL PFS+GMLALAD HGCELIGG Sbjct: 61 FTLGHKCLAVNLSDLAAMGAQPIAFTLALALPEARADWLEPFSRGMLALADAHGCELIGG 120 Query: 121 DTTKGPLTISITVFGEVPPQQALRRDAARAGDDIWVSGTLGDARLALAGYRQEFDINSEA 180 DTTKGPLTISIT+FGEVPPQQALRRDAARAGDD+WVSGTLGDARLALA YRQE +N+E Sbjct: 121 DTTKGPLTISITIFGEVPPQQALRRDAARAGDDLWVSGTLGDARLALAAYRQECSLNAEE 180 Query: 181 LQLAAPRMHAPTPRVALGLALRGIAHAAIDISDGLAGDLGHILDRSHVGATLDVDALPPG 240 L LAAPRMHAPTPRVALGLALRGIAHAAIDISDGLAGDLGH+L RSHVGATLDVDALP G Sbjct: 181 LALAAPRMHAPTPRVALGLALRGIAHAAIDISDGLAGDLGHLLQRSHVGATLDVDALPAG 240 Query: 241 PALQQRDLHLRRRFTLSGGDDYELCFTAPARQREAVLKAAQSSGTAVTRIGQINAQAGLR 300 ALQQRDLHLRRRFTLSGGDDYELCF+AP RQR+AV KAAQ++GTAVTR+G I+A GLR Sbjct: 241 AALQQRDLHLRRRFTLSGGDDYELCFSAPVRQRDAVYKAAQAAGTAVTRVGSIDAAPGLR 300 Query: 301 LLDAAGEPLQDTPDSFDHFRS 321 LLDA+GE LQ+TPDSFDHFRS Sbjct: 301 LLDASGEALQETPDSFDHFRS 321 >ref|YP_001352299.1| thiamine-monophosphate kinase [Janthinobacterium sp. Marseille] gb|ABR88727.1| thiamine-monophosphate kinase [Janthinobacterium sp. Marseille] Length = 322 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 217/321 (67%), Positives = 250/321 (77%) Query: 1 MLSEFELIARYFSRPPAPDSRTALGVGDDCALMTPAPGMQLAISSDMLVAGRHFFPDADP 60 MLSEF+LIARYF RP P +R LG+GDDCAL+ GMQ+AISSDMLV GRHFF ADP Sbjct: 1 MLSEFDLIARYFVRPGHPKNRATLGIGDDCALLAQQDGMQMAISSDMLVEGRHFFAGADP 60 Query: 61 LLLGHKCLAVNLSDLAAMGAQPIAFTLALALPEARADWLAPFSQGMLALADVHGCELIGG 120 LGHK LAVNLSDLAAMGA+P AFTLA +LP A WLA FS G+ LAD H CELIGG Sbjct: 61 RKLGHKSLAVNLSDLAAMGAEPTAFTLAFSLPSAEETWLAEFSHGLFELADAHSCELIGG 120 Query: 121 DTTKGPLTISITVFGEVPPQQALRRDAARAGDDIWVSGTLGDARLALAGYRQEFDINSEA 180 DTTKGPL I ITVFG+ P +ALRRD A+ GDDIWVSGTLGDARLAL +E++++++ Sbjct: 121 DTTKGPLNICITVFGKTPTGEALRRDTAQTGDDIWVSGTLGDARLALGALYKEYELDAKV 180 Query: 181 LQLAAPRMHAPTPRVALGLALRGIAHAAIDISDGLAGDLGHILDRSHVGATLDVDALPPG 240 L AA R+H P PRVALGLALRGIAH+A+D+SDGL GDLGHIL +S VGATL++D LP G Sbjct: 181 LNKAAVRLHTPQPRVALGLALRGIAHSALDVSDGLIGDLGHILKKSEVGATLNLDDLPAG 240 Query: 241 PALQQRDLHLRRRFTLSGGDDYELCFTAPARQREAVLKAAQSSGTAVTRIGQINAQAGLR 300 P LQ++ +RRRFTL+GGDDYELCFTAP +REAVL AA ++ T VTRIG I+A GLR Sbjct: 241 PMLQKQTQEMRRRFTLAGGDDYELCFTAPVSKREAVLGAAMAADTPVTRIGSIDAAPGLR 300 Query: 301 LLDAAGEPLQDTPDSFDHFRS 321 LLD AG PL SFDHF S Sbjct: 301 LLDKAGRPLDLNITSFDHFAS 321 >ref|YP_004754343.1| Thiamine-monophosphate kinase [Collimonas fungivorans Ter331] gb|AEK63520.1| Thiamine-monophosphate kinase [Collimonas fungivorans Ter331] Length = 331 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 237/330 (71%), Positives = 262/330 (79%), Gaps = 9/330 (2%) Query: 1 MLSEFELIARYFSRPPAPD-SRTALGVGDDCALMTPAPGMQLAISSDMLVAGRHFFPDAD 59 MLSEF+LI+RYF+R P + ++ ALGVGDDCAL+ P G QLAIS+DMLV GRHFFPDAD Sbjct: 1 MLSEFDLISRYFTRAPRSNLAQIALGVGDDCALLIPGAGKQLAISTDMLVEGRHFFPDAD 60 Query: 60 PLLLGHKCLAVNLSDLAAMGAQPIAFTLALALPEARADWLAPFSQGMLALADVHGCELIG 119 P LGHKCLAVNLSDLAAMGA+P+AFTLALALP +WLA FS G+LALAD H CELIG Sbjct: 61 PFTLGHKCLAVNLSDLAAMGARPLAFTLALALPAVHEEWLAAFSGGLLALADEHQCELIG 120 Query: 120 GDTTKGPLTISITVFGEVPPQQALRRDAARAGDDIWVSGTLGDARLALAGYRQE------ 173 GDTTKGPL I ITVFGE P QALRRDAA+AGDDIWVSGTLGDARLALA YRQE Sbjct: 121 GDTTKGPLNICITVFGETAPGQALRRDAAQAGDDIWVSGTLGDARLALAVYRQELGAELS 180 Query: 174 --FDINSEALQLAAPRMHAPTPRVALGLALRGIAHAAIDISDGLAGDLGHILDRSHVGAT 231 + S++ +LAA RMH PTPRVALG ALRGIAHAAIDISDGLAGDLGHIL RS VGAT Sbjct: 181 ADLKLGSDSFKLAATRMHQPTPRVALGQALRGIAHAAIDISDGLAGDLGHILARSSVGAT 240 Query: 232 LDVDALPPGPALQQRDLHLRRRFTLSGGDDYELCFTAPARQREAVLKAAQSSGTAVTRIG 291 L VD+LP G L +++L +RR FTL+GGDDYELCFTA A QR AVL AAQS+ TAVTRIG Sbjct: 241 LAVDSLPAGAVLGRQNLAIRRHFTLAGGDDYELCFTAAADQRGAVLAAAQSAATAVTRIG 300 Query: 292 QINAQAGLRLLDAAGEPLQDTPDSFDHFRS 321 I+AQ GLRL DA L SFDHF S Sbjct: 301 SIDAQHGLRLRDAGNSTLDLQLASFDHFLS 330 >ref|YP_001098967.1| thiamin-monophosphate kinase [Herminiimonas arsenicoxydans] emb|CAL60840.1| thiamin-monophosphate kinase (Thiamine-phosphate kinase) [Herminiimonas arsenicoxydans] Length = 319 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 213/318 (66%), Positives = 245/318 (77%) Query: 2 LSEFELIARYFSRPPAPDSRTALGVGDDCALMTPAPGMQLAISSDMLVAGRHFFPDADPL 61 +SEF+LIARYF R P +R LG+GDDCAL+ Q AIS+DMLV GRHFF ADP Sbjct: 1 MSEFDLIARYFVRHAHPKNRATLGIGDDCALLMQEADTQTAISTDMLVEGRHFFVGADPY 60 Query: 62 LLGHKCLAVNLSDLAAMGAQPIAFTLALALPEARADWLAPFSQGMLALADVHGCELIGGD 121 LGHK LAVNLSDLAAMGA+P AFTLA ALP A WL FS G+ ALAD+H CELIGGD Sbjct: 61 KLGHKALAVNLSDLAAMGAEPQAFTLAFALPRADEQWLEQFSAGLFALADMHNCELIGGD 120 Query: 122 TTKGPLTISITVFGEVPPQQALRRDAARAGDDIWVSGTLGDARLALAGYRQEFDINSEAL 181 TTKGPL I IT+FG P QALRRD A+ GDDIWVSGTLGDARLAL R+E+ +N+ AL Sbjct: 121 TTKGPLNICITIFGHTPVGQALRRDTAQIGDDIWVSGTLGDARLALGALREEYPLNAAAL 180 Query: 182 QLAAPRMHAPTPRVALGLALRGIAHAAIDISDGLAGDLGHILDRSHVGATLDVDALPPGP 241 + A R+H P P+VALGLALRGIAH+A+D+SDGL GDLGHIL +S VGATL VDALP G Sbjct: 181 EAACVRLHTPQPQVALGLALRGIAHSALDVSDGLIGDLGHILKKSAVGATLQVDALPLGT 240 Query: 242 ALQQRDLHLRRRFTLSGGDDYELCFTAPARQREAVLKAAQSSGTAVTRIGQINAQAGLRL 301 ALQQ+ L +RRRF+L+GGDDYELCFTAPA +R+AVL AA S+ T+VTRIG I A G RL Sbjct: 241 ALQQQTLEMRRRFSLAGGDDYELCFTAPASKRDAVLGAALSAATSVTRIGVIEAAPGTRL 300 Query: 302 LDAAGEPLQDTPDSFDHF 319 +D G+PL SFDHF Sbjct: 301 IDGDGKPLALQLASFDHF 318 >ref|YP_585188.1| thiamine monophosphate kinase [Cupriavidus metallidurans CH34] gb|ABF09919.1| thiamin-monophosphate kinase [Cupriavidus metallidurans CH34] Length = 325 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 212/318 (66%), Positives = 239/318 (75%), Gaps = 3/318 (0%) Query: 2 LSEFELIARYFSRPPAPDSRTALGVGDDCALMTPAPGMQLAISSDMLVAGRHFFPDADPL 61 LSEF+LI RYF+RP + ALGVGDDCAL+ PG QLAIS+DMLV+GRHFFPD P Sbjct: 8 LSEFDLIRRYFTRPV---HKAALGVGDDCALIEARPGHQLAISTDMLVSGRHFFPDVSPR 64 Query: 62 LLGHKCLAVNLSDLAAMGAQPIAFTLALALPEARADWLAPFSQGMLALADVHGCELIGGD 121 LGHK LAVNLSDLAAMGA+P AFTLALALPEA A WLA F+ GMLALAD HGCELIGGD Sbjct: 65 ALGHKALAVNLSDLAAMGAEPRAFTLALALPEADAGWLAEFAAGMLALADDHGCELIGGD 124 Query: 122 TTKGPLTISITVFGEVPPQQALRRDAARAGDDIWVSGTLGDARLALAGYRQEFDINSEAL 181 TTKGPLT+SITVFG+VPP+QALRRDAAR GDDIW+SGTLGDARLAL R E+ + Sbjct: 125 TTKGPLTLSITVFGDVPPRQALRRDAARPGDDIWISGTLGDARLALGDCRGEWLLPEPDF 184 Query: 182 QLAAPRMHAPTPRVALGLALRGIAHAAIDISDGLAGDLGHILDRSHVGATLDVDALPPGP 241 L PRM PTPRVALGLALRG+AHAA+DISDGL GDLGHIL+RS VGA +DVDALP Sbjct: 185 TLIRPRMEMPTPRVALGLALRGVAHAALDISDGLIGDLGHILERSSVGAIVDVDALPRSE 244 Query: 242 ALQQRDLHLRRRFTLSGGDDYELCFTAPARQREAVLKAAQSSGTAVTRIGQINAQAGLRL 301 L + +R L+GGDDYELCFTAP RE + A+ +T +G I +AGLRL Sbjct: 245 ILDAQPEECQRACVLAGGDDYELCFTAPVGARETIAGIARRLHLPLTHVGSITPEAGLRL 304 Query: 302 LDAAGEPLQDTPDSFDHF 319 +D G P SFDHF Sbjct: 305 VDREGNPYVFKGASFDHF 322