BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4213.p         (137 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776744.1| lipoprotein [Herbaspirillum seropedicae SmR1...   187   3e-46
gb|EGH62411.1| putative lipoprotein [Pseudomonas syringae pv. ma...   134   5e-30
emb|CCA80284.1| putative lipoprotein [blood disease bacterium R229]   130   6e-29
ref|YP_003749559.1| lipoprotein [Ralstonia solanacearum PSI07] >...   130   7e-29
emb|CCA87838.1| putative lipoprotein [Ralstonia syzygii R24]          127   6e-28

>ref|YP_003776744.1| lipoprotein [Herbaspirillum seropedicae SmR1]
 gb|ADJ64836.1| lipoprotein [Herbaspirillum seropedicae SmR1]
          Length = 123

 Score =  187 bits (476), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 98/123 (79%), Positives = 108/123 (87%)

Query: 15  MMNKKLAAGFALGLALALSGCANHQQKSLYGWGNYQDQLYEHFKTEGNGNAAEIAALEEN 74
           MMNKKLAAGFALGLAL LSGCA+ + K+LYGWGNYQDQLY HFK EGNG+ AEIAALEEN
Sbjct: 1   MMNKKLAAGFALGLALTLSGCASQKPKTLYGWGNYQDQLYSHFKNEGNGHEAEIAALEEN 60

Query: 75  LQKMRANNDAVPPGYHAHLGMLYASIGKEDQLIQELQTEKTLFPESAPYMDFLMRNYKKG 134
           LQKMRA ++AVPPGYHAHLGMLYA+ GK+DQLI  LQTEK LFPES  YMDFLM NY+KG
Sbjct: 61  LQKMRARDEAVPPGYHAHLGMLYAAAGKDDQLILALQTEKALFPESTAYMDFLMNNYRKG 120

Query: 135 LSK 137
            +K
Sbjct: 121 ATK 123


>gb|EGH62411.1| putative lipoprotein [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 125

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 65/106 (61%), Positives = 85/106 (80%), Gaps = 1/106 (0%)

Query: 32  LSGCANHQQKSLYGWGNYQDQLYEHFKTEGNGNAAEIAALEENLQKMRANNDAVPPGYHA 91
           ++GCA  Q K+LY WG+YQ ++YE+FK EG    A++A LEE+LQK+RA N   PPGYHA
Sbjct: 21  VTGCA-EQPKTLYQWGSYQPEVYEYFKNEGESKEAQVAKLEEDLQKIRAANATPPPGYHA 79

Query: 92  HLGMLYASIGKEDQLIQELQTEKTLFPESAPYMDFLMRNYKKGLSK 137
            LGMLY S+GK+DQ++QEL+TEKTLFPESA YMDFL++N   G++K
Sbjct: 80  QLGMLYGSLGKDDQMVQELRTEKTLFPESATYMDFLLKNAHAGVAK 125


>emb|CCA80284.1| putative lipoprotein [blood disease bacterium R229]
          Length = 121

 Score =  130 bits (327), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 70/116 (60%), Positives = 89/116 (76%), Gaps = 5/116 (4%)

Query: 19  KLAAGFALGLALALSGCANHQQKSLYGWGNYQDQLYEHFKTEGNGNAAEIAALEENLQKM 78
           ++AAG A+G AL L+GCA    KSLY W  YQ Q+YE+FK  G    A++A LE  L+K+
Sbjct: 9   RVAAGVAVGSAL-LAGCAG--PKSLYQWEGYQPQVYEYFK--GESKEAQVAELERGLEKI 63

Query: 79  RANNDAVPPGYHAHLGMLYASIGKEDQLIQELQTEKTLFPESAPYMDFLMRNYKKG 134
           ++ N AVPPGYHAHLGMLY+S+GK+DQ++QE QTEK LFPES  Y+DFLM+N KKG
Sbjct: 64  KSANGAVPPGYHAHLGMLYSSLGKDDQMVQEFQTEKALFPESGAYIDFLMKNVKKG 119


>ref|YP_003749559.1| lipoprotein [Ralstonia solanacearum PSI07]
 emb|CBJ34919.1| putative lipoprotein [Ralstonia solanacearum PSI07]
          Length = 122

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 70/116 (60%), Positives = 89/116 (76%), Gaps = 5/116 (4%)

Query: 19  KLAAGFALGLALALSGCANHQQKSLYGWGNYQDQLYEHFKTEGNGNAAEIAALEENLQKM 78
           ++AAG A+G AL L+GCA    KSLY W  YQ Q+YE+FK  G    A++A LE  L+K+
Sbjct: 10  RVAAGVAVGSAL-LAGCAG--PKSLYQWEGYQPQVYEYFK--GESKEAQVAELERGLEKI 64

Query: 79  RANNDAVPPGYHAHLGMLYASIGKEDQLIQELQTEKTLFPESAPYMDFLMRNYKKG 134
           ++ N AVPPGYHAHLGMLY+S+GK+DQ++QE QTEK LFPES  Y+DFLM+N KKG
Sbjct: 65  KSANGAVPPGYHAHLGMLYSSLGKDDQMVQEFQTEKALFPESGAYIDFLMKNVKKG 120


>emb|CCA87838.1| putative lipoprotein [Ralstonia syzygii R24]
          Length = 121

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 68/116 (58%), Positives = 87/116 (75%), Gaps = 5/116 (4%)

Query: 19  KLAAGFALGLALALSGCANHQQKSLYGWGNYQDQLYEHFKTEGNGNAAEIAALEENLQKM 78
           ++AAG A+G AL L+GCA    KSLY W  YQ Q+YE+FK  G    A++  LE  L+K+
Sbjct: 9   RVAAGVAVGSAL-LAGCAG--PKSLYQWEGYQPQVYEYFK--GESKEAQVTELERGLEKI 63

Query: 79  RANNDAVPPGYHAHLGMLYASIGKEDQLIQELQTEKTLFPESAPYMDFLMRNYKKG 134
           ++ N AVPPGYHAHLGMLY+S+GK+DQ++QE Q EK LFPES  Y+DFLM+N KKG
Sbjct: 64  KSANGAVPPGYHAHLGMLYSSLGKDDQMVQEFQAEKALFPESGAYIDFLMKNVKKG 119