BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4212.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776743.1| curli polymers formation protein [Herbaspiri... 344 6e-93 ref|YP_002437657.1| putative lipoprotein [Pseudomonas aeruginosa... 317 1e-84 ref|NP_248735.1| hypothetical protein PA0045 [Pseudomonas aerugi... 316 1e-84 ref|YP_788202.1| putative lipoprotein [Pseudomonas aeruginosa UC... 316 1e-84 ref|YP_260798.2| curli production assembly/transport component C... 316 2e-84 >ref|YP_003776743.1| curli polymers formation protein [Herbaspirillum seropedicae SmR1] gb|ADJ64835.1| curli polymers formation protein [Herbaspirillum seropedicae SmR1] Length = 222 Score = 344 bits (882), Expect = 6e-93, Method: Composition-based stats. Identities = 199/222 (89%), Positives = 213/222 (95%) Query: 1 MFSRYVTTVAAVAMVTALGGCATENSRSLPVAQVASAQQAYQGARSPIAVGKFDNRSSYL 60 M +RYVTTVAAV MV+AL GCA+E SRS+ V +VASA QAYQGARSPIAVGKF+NRSSYL Sbjct: 1 MNNRYVTTVAAVVMVSALAGCASEGSRSVAVVKVASAGQAYQGARSPIAVGKFENRSSYL 60 Query: 61 RGIFSDGVDRLGGQAKTILITHLQQSNRFSVMDRDNMGELAQEAKLNKQTQALKGANYVV 120 RGIFSDGVDRLG QAKT+LITHLQQSNRFSVMDRD+M ELAQEAKLN+QTQ++KGANYVV Sbjct: 61 RGIFSDGVDRLGNQAKTVLITHLQQSNRFSVMDRDSMSELAQEAKLNQQTQSIKGANYVV 120 Query: 121 TGDVTEFGRKETGDRQLFGILGRGKSQVAYAKVALNIVDVNTSQVVYSAQGAGEYSLDNR 180 TGDV+EFGRKETGDRQLFGILGRGKSQVAYAKV+LNIVDVNTSQVVYSAQGAGEYSLDNR Sbjct: 121 TGDVSEFGRKETGDRQLFGILGRGKSQVAYAKVSLNIVDVNTSQVVYSAQGAGEYSLDNR 180 Query: 181 EIVGFGGTASYDSTLNGKVLDLAIREAVQNLVTGIDSGAWKP 222 EI+GFGGTASYDSTLNGKVLDLAIREAVQNLVTGIDSGAWKP Sbjct: 181 EIIGFGGTASYDSTLNGKVLDLAIREAVQNLVTGIDSGAWKP 222 >ref|YP_002437657.1| putative lipoprotein [Pseudomonas aeruginosa LESB58] ref|ZP_04931032.1| hypothetical protein PACG_03797 [Pseudomonas aeruginosa C3719] gb|EAZ55151.1| hypothetical protein PACG_03797 [Pseudomonas aeruginosa C3719] emb|CAW24774.1| putative lipoprotein [Pseudomonas aeruginosa LESB58] gb|EGM15838.1| hypothetical protein PA13_21719 [Pseudomonas aeruginosa 138244] dbj|GAA19899.1| putative lipoprotein [Pseudomonas aeruginosa NCMG1179] Length = 228 Score = 317 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 165/212 (77%), Positives = 185/212 (87%) Query: 11 AVAMVTALGGCATENSRSLPVAQVASAQQAYQGARSPIAVGKFDNRSSYLRGIFSDGVDR 70 AVA + L GCATE S +LPV QV S + Y G RSPIAVGKFDNRSSY+RGIFSDGVDR Sbjct: 14 AVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDR 73 Query: 71 LGGQAKTILITHLQQSNRFSVMDRDNMGELAQEAKLNKQTQALKGANYVVTGDVTEFGRK 130 LGGQAKTILITHLQQ+NRF+V+DRDNM E+ QEA + Q Q LKGA+YVVTGDVTEFGRK Sbjct: 74 LGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFGRK 133 Query: 131 ETGDRQLFGILGRGKSQVAYAKVALNIVDVNTSQVVYSAQGAGEYSLDNREIVGFGGTAS 190 E GDRQLFGILGRGKSQ+AYAKVALNIV+++TS+VVYS QGAGEY+L NRE++GFGGTAS Sbjct: 134 EVGDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTAS 193 Query: 191 YDSTLNGKVLDLAIREAVQNLVTGIDSGAWKP 222 YDSTLNGKVLDLA+REAV LV +DSGAWKP Sbjct: 194 YDSTLNGKVLDLAMREAVNKLVNAVDSGAWKP 225 >ref|NP_248735.1| hypothetical protein PA0045 [Pseudomonas aeruginosa PAO1] ref|ZP_01362957.1| hypothetical protein PaerPA_01000047 [Pseudomonas aeruginosa PACS2] ref|ZP_06876028.1| putative lipoprotein [Pseudomonas aeruginosa PAb1] gb|AAG03435.1|AE004444_4 hypothetical protein PA0045 [Pseudomonas aeruginosa PAO1] gb|EGM13481.1| putative lipoprotein [Pseudomonas aeruginosa 152504] gb|AEO72538.1| putative lipoprotein [Pseudomonas aeruginosa M18] Length = 228 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 165/212 (77%), Positives = 185/212 (87%) Query: 11 AVAMVTALGGCATENSRSLPVAQVASAQQAYQGARSPIAVGKFDNRSSYLRGIFSDGVDR 70 AVA + L GCATE S +LPV QV S + Y G RSPIAVGKFDNRSSY+RGIFSDGVDR Sbjct: 14 AVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDR 73 Query: 71 LGGQAKTILITHLQQSNRFSVMDRDNMGELAQEAKLNKQTQALKGANYVVTGDVTEFGRK 130 LGGQAKTILITHLQQ+NRF+V+DRDNM E+ QEA + Q Q LKGA+YVVTGDVTEFGRK Sbjct: 74 LGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFGRK 133 Query: 131 ETGDRQLFGILGRGKSQVAYAKVALNIVDVNTSQVVYSAQGAGEYSLDNREIVGFGGTAS 190 E GDRQLFGILGRGKSQ+AYAKVALNIV+++TS+VVYS QGAGEY+L NRE++GFGGTAS Sbjct: 134 EVGDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTAS 193 Query: 191 YDSTLNGKVLDLAIREAVQNLVTGIDSGAWKP 222 YDSTLNGKVLDLA+REAV LV +DSGAWKP Sbjct: 194 YDSTLNGKVLDLAMREAVNKLVNAVDSGAWKP 225 >ref|YP_788202.1| putative lipoprotein [Pseudomonas aeruginosa UCBPP-PA14] ref|ZP_07798158.1| putative lipoprotein [Pseudomonas aeruginosa 39016] gb|ABJ15003.1| putative lipoprotein [Pseudomonas aeruginosa UCBPP-PA14] gb|EFQ43254.1| putative lipoprotein [Pseudomonas aeruginosa 39016] dbj|BAK86941.1| putative lipoprotein [Pseudomonas aeruginosa NCGM2.S1] Length = 228 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 165/212 (77%), Positives = 185/212 (87%) Query: 11 AVAMVTALGGCATENSRSLPVAQVASAQQAYQGARSPIAVGKFDNRSSYLRGIFSDGVDR 70 AVA + L GCATE S +LPV QV S + Y G RSPIAVGKFDNRSSY+RGIFSDGVDR Sbjct: 14 AVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDR 73 Query: 71 LGGQAKTILITHLQQSNRFSVMDRDNMGELAQEAKLNKQTQALKGANYVVTGDVTEFGRK 130 LGGQAKTILITHLQQ+NRF+V+DRDNM E+ QEA + Q Q LKGA+YVVTGDVTEFGRK Sbjct: 74 LGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFGRK 133 Query: 131 ETGDRQLFGILGRGKSQVAYAKVALNIVDVNTSQVVYSAQGAGEYSLDNREIVGFGGTAS 190 E GDRQLFGILGRGKSQ+AYAKVALNIV+++TS+VVYS QGAGEY+L NRE++GFGGTAS Sbjct: 134 EVGDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTAS 193 Query: 191 YDSTLNGKVLDLAIREAVQNLVTGIDSGAWKP 222 YDSTLNGKVLDLA+REAV LV +DSGAWKP Sbjct: 194 YDSTLNGKVLDLAMREAVNKLVNAVDSGAWKP 225 >ref|YP_260798.2| curli production assembly/transport component CsgG [Pseudomonas fluorescens Pf-5] gb|AAY92962.2| curli production assembly/transport component CsgG [Pseudomonas fluorescens Pf-5] Length = 226 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 163/222 (73%), Positives = 195/222 (87%) Query: 1 MFSRYVTTVAAVAMVTALGGCATENSRSLPVAQVASAQQAYQGARSPIAVGKFDNRSSYL 60 + S+ + + A+A++ + GCATE+SR+LPV +V SA Q + GAR P+AVGKFDNRSSY+ Sbjct: 3 VISKLMLSAVALAVLAGMSGCATESSRALPVEKVQSASQVWTGARVPMAVGKFDNRSSYM 62 Query: 61 RGIFSDGVDRLGGQAKTILITHLQQSNRFSVMDRDNMGELAQEAKLNKQTQALKGANYVV 120 RGIFSDGVDRLGGQAKTILITHLQQ+NRFSV+DRDNMGE+ QEA + Q Q LKGA++VV Sbjct: 63 RGIFSDGVDRLGGQAKTILITHLQQTNRFSVLDRDNMGEIQQEAAIKGQAQKLKGADFVV 122 Query: 121 TGDVTEFGRKETGDRQLFGILGRGKSQVAYAKVALNIVDVNTSQVVYSAQGAGEYSLDNR 180 TGDVTEFGRKETGD QLFGILGRGK+QVAYAKVALNIV+++TS+VVYS QGAGEY+L NR Sbjct: 123 TGDVTEFGRKETGDHQLFGILGRGKTQVAYAKVALNIVNISTSEVVYSTQGAGEYALSNR 182 Query: 181 EIVGFGGTASYDSTLNGKVLDLAIREAVQNLVTGIDSGAWKP 222 E++GFGGTA+YDSTLNGKVLDLA+REAV +V ID+GAWKP Sbjct: 183 EVIGFGGTAAYDSTLNGKVLDLAMREAVNRMVEAIDAGAWKP 224