BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4207.p (223 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776738.1| beta-lactamase class A protein [Herbaspirill... 362 2e-98 ref|YP_004231030.1| Beta-lactamase [Burkholderia sp. CCGE1001] >... 259 1e-67 ref|YP_001857399.1| beta-lactamase [Burkholderia phymatum STM815... 258 4e-67 ref|YP_002360433.1| beta-lactamase [Methylocella silvestris BL2]... 258 4e-67 ref|YP_004752033.1| beta-lactamase [Collimonas fungivorans Ter33... 254 5e-66 >ref|YP_003776738.1| beta-lactamase class A protein [Herbaspirillum seropedicae SmR1] gb|ADJ64830.1| beta-lactamase class A protein [Herbaspirillum seropedicae SmR1] Length = 299 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 196/223 (87%), Positives = 206/223 (92%) Query: 1 MCSTFKFLAASAVLRRVDTGAEQLDRRIVYGEDVLVNYSPTTGKHTGGDGLSLAQLCEAA 60 MCSTFKFLAA+AVLRRVD G EQL RRIVY + LV YSPTTGKHTGG GLS+AQLCEAA Sbjct: 77 MCSTFKFLAAAAVLRRVDQGQEQLTRRIVYQKQDLVPYSPTTGKHTGGAGLSMAQLCEAA 136 Query: 61 ITLSDNTAANLMLESMDGPAGMTRFVRSLGDELTRLDRNEPTLNEAVPGDPRDTTTPAAM 120 +TLSDNTAANLML SM GPAG+TRFVR+LGDELTRLDRNEPTLNEAVPGDPRDTTTPAAM Sbjct: 137 MTLSDNTAANLMLASMGGPAGLTRFVRTLGDELTRLDRNEPTLNEAVPGDPRDTTTPAAM 196 Query: 121 TADLRQLVLGNALTPASRQQLAQWLVANQTGDKRVRAGLPKGWKVGDKTGTGRLGTANDV 180 TADLRQLVLGNALTPASRQQL QWL+ANQTG KRVRAGLP WKVGDKTGTGRLGTAND+ Sbjct: 197 TADLRQLVLGNALTPASRQQLTQWLIANQTGAKRVRAGLPASWKVGDKTGTGRLGTANDI 256 Query: 181 GVVWTEKGAPLLFAVYLTENAATDARRDAVHAEVGRLIGQLMT 223 GVVWT +GAPLLFAVYLTENAATDA RDAVH EVGRLIGQLM+ Sbjct: 257 GVVWTAQGAPLLFAVYLTENAATDAGRDAVHTEVGRLIGQLMS 299 >ref|YP_004231030.1| Beta-lactamase [Burkholderia sp. CCGE1001] gb|ADX57970.1| Beta-lactamase [Burkholderia sp. CCGE1001] Length = 315 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 145/222 (65%), Positives = 165/222 (74%), Gaps = 4/222 (1%) Query: 1 MCSTFKFLAASAVLRRVDTGAEQLDRRIVYGEDVLVNYSPTTGKHT----GGDGLSLAQL 56 MCSTFK LAA A+L RVD G E L RRIVY + LV YSP T KHT G G+S+AQL Sbjct: 90 MCSTFKLLAAGAILARVDRGEEDLQRRIVYSKSELVPYSPATSKHTRELTGNAGMSVAQL 149 Query: 57 CEAAITLSDNTAANLMLESMDGPAGMTRFVRSLGDELTRLDRNEPTLNEAVPGDPRDTTT 116 C+AAITLSDNTAANL+L++ GPAG+T FVRSLGD +TRLDRNEPTLNEA PGDPRDTTT Sbjct: 150 CKAAITLSDNTAANLLLQTFGGPAGLTAFVRSLGDGITRLDRNEPTLNEATPGDPRDTTT 209 Query: 117 PAAMTADLRQLVLGNALTPASRQQLAQWLVANQTGDKRVRAGLPKGWKVGDKTGTGRLGT 176 P AM +LR+LVLG L+ ASR QL WL AN+TG R+RA LPK W VGDKTGTG GT Sbjct: 210 PNAMLGNLRELVLGERLSSASRAQLLAWLAANETGGARIRAKLPKDWGVGDKTGTGEHGT 269 Query: 177 ANDVGVVWTEKGAPLLFAVYLTENAATDARRDAVHAEVGRLI 218 ANDV ++W P+L AVYLTE A AR +A A VG L+ Sbjct: 270 ANDVAILWPPGRGPILVAVYLTETAGDAARGNAAIANVGALV 311 >ref|YP_001857399.1| beta-lactamase [Burkholderia phymatum STM815] gb|ACC70353.1| Beta-lactamase [Burkholderia phymatum STM815] Length = 300 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 139/222 (62%), Positives = 168/222 (75%), Gaps = 1/222 (0%) Query: 1 MCSTFKFLAASAVLRRVDTGAEQLDRRIVYGEDVLVNYSPTTGKHTGGDGLSLAQLCEAA 60 MCSTFKFL ASAVL R D G EQL RRIVY +D +V SP +G GGDG+++++LCEAA Sbjct: 79 MCSTFKFLLASAVLMRKDQGKEQLGRRIVYAKDAVVANSPVSGPRAGGDGMTVSELCEAA 138 Query: 61 ITLSDNTAANLMLESMDGPAGMTRFVRSLGDELTRLDRNEPTLNEAVPGDPRDTTTPAAM 120 +T SDNTAANL+LES+ GP +T F R +GD +TRLDRNEPTLNEA+ GDPRDTTTPAAM Sbjct: 139 LTRSDNTAANLLLESIGGPPALTVFARGIGDGVTRLDRNEPTLNEAIEGDPRDTTTPAAM 198 Query: 121 TADLRQLVLGNALTPASRQQLAQWLVANQTGDKRVRAGLPKGWKVGDKTGTGRLGTANDV 180 AD+R ++LG L+ ASRQ L WLVAN+TGD R+RAGLP W+VGDKTGTG GT+ND+ Sbjct: 199 IADMRAMLLGEHLSAASRQHLTVWLVANKTGDTRLRAGLPPDWRVGDKTGTGERGTSNDI 258 Query: 181 GVVWTEKGAPLLFAVYLTENAATD-ARRDAVHAEVGRLIGQL 221 +VW P+L AVYLT T A+RDA A+VG L+ L Sbjct: 259 AIVWPAGRPPVLVAVYLTGATQTSAAQRDAAIAKVGALVAHL 300 >ref|YP_002360433.1| beta-lactamase [Methylocella silvestris BL2] gb|ACK49071.1| Beta-lactamase [Methylocella silvestris BL2] Length = 291 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 131/221 (59%), Positives = 163/221 (73%) Query: 1 MCSTFKFLAASAVLRRVDTGAEQLDRRIVYGEDVLVNYSPTTGKHTGGDGLSLAQLCEAA 60 +CSTFKFLAA+ VL RVD E L RRI+Y DVLV +SP TGK+ GGDGL++ ++CEAA Sbjct: 70 LCSTFKFLAAAFVLARVDRKEESLARRIIYASDVLVAHSPITGKYVGGDGLTVGEICEAA 129 Query: 61 ITLSDNTAANLMLESMDGPAGMTRFVRSLGDELTRLDRNEPTLNEAVPGDPRDTTTPAAM 120 +T+SDNTA NL+L+S GPAG+T +VRSLGD TR+DR E LNEA PGDPRDTTTP AM Sbjct: 130 VTVSDNTAGNLLLDSFGGPAGLTAYVRSLGDNFTRIDRRETELNEAAPGDPRDTTTPLAM 189 Query: 121 TADLRQLVLGNALTPASRQQLAQWLVANQTGDKRVRAGLPKGWKVGDKTGTGRLGTANDV 180 L + VLG +L+ SRQQ+ WLVAN TG +R+R+G PKGW+VGDKTG+G T ND+ Sbjct: 190 LEILHKTVLGTSLSAPSRQQMIAWLVANTTGGQRLRSGAPKGWRVGDKTGSGENNTTNDI 249 Query: 181 GVVWTEKGAPLLFAVYLTENAATDARRDAVHAEVGRLIGQL 221 ++W + APL+ Y TE A+ RDAV +EVGRL L Sbjct: 250 AIIWPPQRAPLIVTAYYTEARASAVERDAVLSEVGRLAADL 290 >ref|YP_004752033.1| beta-lactamase [Collimonas fungivorans Ter331] gb|AEK61210.1| Beta-lactamase [Collimonas fungivorans Ter331] Length = 302 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 135/221 (61%), Positives = 169/221 (76%) Query: 1 MCSTFKFLAASAVLRRVDTGAEQLDRRIVYGEDVLVNYSPTTGKHTGGDGLSLAQLCEAA 60 MCSTFK LAA L RVD G EQL RRI + + LV YSP T KH GGDG+S+A+LCEA Sbjct: 79 MCSTFKLLAAGLTLHRVDQGREQLARRIRFEKADLVPYSPATEKHAGGDGMSVAELCEAT 138 Query: 61 ITLSDNTAANLMLESMDGPAGMTRFVRSLGDELTRLDRNEPTLNEAVPGDPRDTTTPAAM 120 +TLSDNTAANL+L S GP +T ++RSLGD++TRLDR EP LN+A PGDPRDTT+P+AM Sbjct: 139 LTLSDNTAANLLLHSFGGPPQLTAYLRSLGDKVTRLDRIEPDLNQATPGDPRDTTSPSAM 198 Query: 121 TADLRQLVLGNALTPASRQQLAQWLVANQTGDKRVRAGLPKGWKVGDKTGTGRLGTANDV 180 + ++QL+LGNAL+ SR+QL WL+AN+TGDKR+RA LP GW+VGDKTG+G G+ ND+ Sbjct: 199 LSTMQQLLLGNALSADSRKQLTTWLLANKTGDKRLRALLPAGWRVGDKTGSGAYGSTNDI 258 Query: 181 GVVWTEKGAPLLFAVYLTENAATDARRDAVHAEVGRLIGQL 221 G+++ APLL A YLT A++A R+A AEVGRL L Sbjct: 259 GMLFPPGRAPLLVAAYLTGTKASEATRNATLAEVGRLAASL 299