BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4205.p (329 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776735.1| Zn-dependent protease with chaperone functio... 531 e-149 ref|YP_001352817.1| hypothetical protein mma_1127 [Janthinobacte... 395 e-108 ref|YP_001099298.1| hypothetical protein HEAR0989 [Herminiimonas... 382 e-104 gb|AEG70020.1| conserved hypothetical protein [Ralstonia solanac... 253 2e-65 ref|YP_001898164.1| peptidase M48 Ste24p [Ralstonia pickettii 12... 251 1e-64 >ref|YP_003776735.1| Zn-dependent protease with chaperone function transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64827.1| Zn-dependent protease with chaperone function transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 329 Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats. Identities = 294/329 (89%), Positives = 313/329 (95%) Query: 1 MTVSASYYDGKTSKRYQVTLDVSDGMAQVRGEVERDCPIAQLRVSERLNRAARKVSFPDG 60 M+V ASYYDG+TS+R+QVTL+V G+AQVRGE+ERDCPI QLRVSER RAARKVSFPDG Sbjct: 1 MSVLASYYDGRTSRRHQVTLEVVAGVAQVRGEIERDCPIGQLRVSERFARAARKVSFPDG 60 Query: 61 AYLEIIDGAAFSALLHETGHRDSLVVRLQQSWRHALAACAALVAVVVLSYLYLLPLAAQG 120 AYLEIIDGAAF LL ETGH+DSLVVRLQQSWRHALAACA LVAVVVLSY+YLLPLAAQG Sbjct: 61 AYLEIIDGAAFRELLQETGHQDSLVVRLQQSWRHALAACAVLVAVVVLSYVYLLPLAAQG 120 Query: 121 ITAILPVAVDRQVGQGTLDFLDQHVLAPSQLDAQRAKGITSRFRALTAPMADAPDYQIVF 180 I A LPVAVDRQ+GQGTL+FLDQHVLAPSQLDA+R + IT+RFRALTAP+ DAPDYQIVF Sbjct: 121 IAATLPVAVDRQIGQGTLEFLDQHVLAPSQLDARRTQAITARFRALTAPLPDAPDYQIVF 180 Query: 181 RKSRIGPNAFALPSGQIVVTDEIVQLLDDDDALMGVLAHELGHVHRRHLMRRLIQSSAIA 240 RKSRIGPNAFALPSGQIVVTDEIV+LLDDDDALMGVLAHELGHVHRRHLMRRLIQSSAIA Sbjct: 181 RKSRIGPNAFALPSGQIVVTDEIVRLLDDDDALMGVLAHELGHVHRRHLMRRLIQSSAIA 240 Query: 241 ATATLLFGDVSAVLANIPTVLLDLKYSRDIEREADDYAIAMFKANGLPRQKLALVFEKLE 300 ATAT+LFGDVSAVLANIPTVLLDLKYSRDIEREADDYAIAMFKANGLPRQKLALVFEKLE Sbjct: 241 ATATVLFGDVSAVLANIPTVLLDLKYSRDIEREADDYAIAMFKANGLPRQKLALVFEKLE 300 Query: 301 SAGKDDPAARYLSSHPANEERIAHILGAR 329 SAGKDDPA+ YLSSHPAN+ERIAHILGAR Sbjct: 301 SAGKDDPASPYLSSHPANDERIAHILGAR 329 >ref|YP_001352817.1| hypothetical protein mma_1127 [Janthinobacterium sp. Marseille] gb|ABR91003.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 329 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 194/329 (58%), Positives = 255/329 (77%) Query: 1 MTVSASYYDGKTSKRYQVTLDVSDGMAQVRGEVERDCPIAQLRVSERLNRAARKVSFPDG 60 M++ A Y+DGKTS+ +QVTL V G A + G+ ER CPI++LRVSER RKV+FPD Sbjct: 1 MSIPALYFDGKTSRAHQVTLSVEGGHATISGDAERSCPISELRVSERARNTKRKVTFPDD 60 Query: 61 AYLEIIDGAAFSALLHETGHRDSLVVRLQQSWRHALAACAALVAVVVLSYLYLLPLAAQG 120 AYLEI+D AAF ALL +TGH+DS +VR+QQSWR AL A AA + V+ LSYLY+LPLA++G Sbjct: 61 AYLEIVDTAAFDALLADTGHQDSFIVRMQQSWRGALGAVAATLVVLTLSYLYVLPLASEG 120 Query: 121 ITAILPVAVDRQVGQGTLDFLDQHVLAPSQLDAQRAKGITSRFRALTAPMADAPDYQIVF 180 I +LP V+R + QG LDFLD+ + APS+L R + + +F+ L P P+Y+I+F Sbjct: 121 IAKMLPERVERSISQGMLDFLDKRIFAPSKLPLARQQALIEQFKQLQPPREGVPNYRILF 180 Query: 181 RKSRIGPNAFALPSGQIVVTDEIVQLLDDDDALMGVLAHELGHVHRRHLMRRLIQSSAIA 240 RKS+IGPNAFALPSG+I++TDE+VQL+ +D+ +MGVLAHELGH+H RHLMRR++QSSAIA Sbjct: 181 RKSKIGPNAFALPSGEIIITDELVQLMKNDEQIMGVLAHELGHLHERHLMRRVVQSSAIA 240 Query: 241 ATATLLFGDVSAVLANIPTVLLDLKYSRDIEREADDYAIAMFKANGLPRQKLALVFEKLE 300 A T++FGD SA++ANIPT+LLD+KYSRD EREADDYAIAM KANG+ +A FE+L+ Sbjct: 241 ALVTVVFGDASAIVANIPTLLLDMKYSRDAEREADDYAIAMMKANGIDLAHMAGGFEQLQ 300 Query: 301 SAGKDDPAARYLSSHPANEERIAHILGAR 329 + ++ YLSSHP+ +ERI HIL +R Sbjct: 301 ATTRETTPPPYLSSHPSTDERIEHILKSR 329 >ref|YP_001099298.1| hypothetical protein HEAR0989 [Herminiimonas arsenicoxydans] emb|CAL61171.1| putative Peptidase family M48 [Herminiimonas arsenicoxydans] Length = 327 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 200/329 (60%), Positives = 249/329 (75%), Gaps = 2/329 (0%) Query: 1 MTVSASYYDGKTSKRYQVTLDVSDGMAQVRGEVERDCPIAQLRVSERLNRAARKVSFPDG 60 M + A Y+DGKTS+ Y+VTL V GMA + G+ ER C IA+LRVSER+ +RKV+FPD Sbjct: 1 MQIPALYFDGKTSRAYRVTLSVEGGMAVISGDAERSCAIAELRVSERVRNTSRKVTFPDD 60 Query: 61 AYLEIIDGAAFSALLHETGHRDSLVVRLQQSWRHALAACAALVAVVVLSYLYLLPLAAQG 120 AYLEI D AF LL TGH+DS+VVR QQSWR AL A AA V V+ L Y Y LPLAA+ Sbjct: 61 AYLEIHDTRAFDTLLAATGHQDSIVVRAQQSWRGALLAFAATVLVLALGYSYGLPLAAEA 120 Query: 121 ITAILPVAVDRQVGQGTLDFLDQHVLAPSQLDAQRAKGITSRFRALTAPMADAPDYQIVF 180 I LP V+R + G L+FLD+ +LAPSQL R I + F+ L P AP+YQ+VF Sbjct: 121 IAKALPEKVERSISSGMLEFLDKRILAPSQLPLARQTEIAAHFKQLLPPREGAPNYQLVF 180 Query: 181 RKSRIGPNAFALPSGQIVVTDEIVQLLDDDDALMGVLAHELGHVHRRHLMRRLIQSSAIA 240 RKS IGPNAFALPSGQI++TDE+V+LLD+D+ +MGVLAHELGH+H RHLMRR++QSSAI Sbjct: 181 RKSNIGPNAFALPSGQIILTDELVKLLDNDEQIMGVLAHELGHLHERHLMRRIVQSSAIG 240 Query: 241 ATATLLFGDVSAVLANIPTVLLDLKYSRDIEREADDYAIAMFKANGLPRQKLALVFEKLE 300 A AT++FGDVSA++ANIPT++LD+KYSRD EREADDYAIAM KANG+ +LA FEK++ Sbjct: 241 AVATVIFGDVSAIIANIPTLMLDMKYSRDAEREADDYAIAMMKANGISLSQLARGFEKMQ 300 Query: 301 SAGKDDPAARYLSSHPANEERIAHILGAR 329 + ++ + YLSSHP+ ERIAHI AR Sbjct: 301 T--QEQEPSPYLSSHPSTTERIAHIRDAR 327 >gb|AEG70020.1| conserved hypothetical protein [Ralstonia solanacearum Po82] Length = 358 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 159/342 (46%), Positives = 206/342 (60%), Gaps = 23/342 (6%) Query: 3 VSASYYDGKTSKRYQVTLDVSDGMAQV---RGEVERDCPIAQLRVSERLNRAARKVSFPD 59 + A+Y+DG+TS+ V L V G A + G R P++ LRVSER+ A R ++F D Sbjct: 2 ILATYFDGRTSRAQPVRLAVEQGEAVLFDPEGVPVRRAPLSTLRVSERIKHAPRLITFDD 61 Query: 60 GAYLEIIDGA---AFSALLHETGHRDSLVVRLQQSWRHALAACAALVAVVVLSYLYLLPL 116 GA+ EI D A A +ALLH TG+R+ +VVR Q SWR AL A ++A +VL Y Y LP Sbjct: 62 GAFCEIADPAEQQALNALLHRTGYREGVVVRAQNSWRLALGALVLMLATLVLGYRYGLPW 121 Query: 117 AAQGITAILPVAVDRQVGQGTLDFLDQHVLAPSQLDAQRAKGITSRFRALTAPMADAPDY 176 A + I+P V+ Q+G +L LD H L S+L + I RF AL AP A Y Sbjct: 122 GAHVLADIVPQRVEVQLGDASLAALDAHWLKSSKLPPAQQARIRERFAALRAPDA-THTY 180 Query: 177 QIVFRKS-RIGPNAFALPSGQIVVTDEIVQLLDDDDALMGVLAHELGHVHRRHLMRRLIQ 235 I FR + ++G NAFALP G I+VTD +V+L+ + D LMGVLAHE GHV RH +R+LIQ Sbjct: 181 TIAFRDAGKLGANAFALPGGDIIVTDALVRLVGEGDGLMGVLAHEAGHVEYRHGLRQLIQ 240 Query: 236 SSAIAATATLLFGDVSAVLANIPTVLLDLKYSRDIEREADDYAIAMFKANGLPRQKLALV 295 SSAI ATA LLFGDVS++LA +P +L L+YSRD ER+AD YA M + NGL A V Sbjct: 241 SSAIGATAALLFGDVSSILAGVPATMLTLRYSRDYERDADRYAARMLQLNGLSVAAFADV 300 Query: 296 FEKLE---------------SAGKDDPAARYLSSHPANEERI 322 + LE + DD A+ + SSHP ERI Sbjct: 301 LQALEDSHGGTRGTGSTAERTGQGDDDASGFFSSHPLTRERI 342 >ref|YP_001898164.1| peptidase M48 Ste24p [Ralstonia pickettii 12J] gb|ACD25732.1| peptidase M48 Ste24p [Ralstonia pickettii 12J] Length = 361 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 146/304 (48%), Positives = 192/304 (63%), Gaps = 6/304 (1%) Query: 3 VSASYYDGKTSKRYQVTLDVSDGMA---QVRGEVERDCPIAQLRVSERLNRAARKVSFPD 59 + A+Y+DG+TS+ V L V G A + G V R P+A LRVSER+ A R ++F D Sbjct: 2 ILATYFDGRTSRAQPVRLAVEAGEAVLFEPEGTVLRRAPLATLRVSERVKHAPRLITFED 61 Query: 60 GAYLEIIDGA---AFSALLHETGHRDSLVVRLQQSWRHALAACAALVAVVVLSYLYLLPL 116 GA+ EI D A + +ALLH TG+R+ VVR Q SW+ AL + A+V V+ L Y Y LP Sbjct: 62 GAFCEITDPAEQTSLNALLHRTGYREGWVVRAQNSWKLALGSLLAMVVVLALGYRYGLPW 121 Query: 117 AAQGITAILPVAVDRQVGQGTLDFLDQHVLAPSQLDAQRAKGITSRFRALTAPMADAPDY 176 A+ + ++P + Q+G+ TL +D+ L PS+L A I +RF AL P Y Sbjct: 122 GAKVMAGMVPQRAEAQLGRSTLKAMDERWLRPSKLPAALQDRIRARFAALHKPPQATHTY 181 Query: 177 QIVFRKSRIGPNAFALPSGQIVVTDEIVQLLDDDDALMGVLAHELGHVHRRHLMRRLIQS 236 IVFR + IG NAFALP G IVVTD +V+L+ + D L GVLAHE GHV RH +R++IQS Sbjct: 182 HIVFRDADIGANAFALPGGDIVVTDALVKLVGEGDGLTGVLAHEAGHVEYRHGLRQVIQS 241 Query: 237 SAIAATATLLFGDVSAVLANIPTVLLDLKYSRDIEREADDYAIAMFKANGLPRQKLALVF 296 SAI ATA LLFGDVS +L+ +P LL L+YSRD ER+AD YA + + NGL A V Sbjct: 242 SAIGATAALLFGDVSTILSGVPAALLTLRYSRDYERDADRYAALLLQENGLSVAAFADVL 301 Query: 297 EKLE 300 + LE Sbjct: 302 QALE 305