BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4196.p (393 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776726.1| sugar ABC transporter ATPase [Herbaspirillum... 696 0.0 ref|YP_004417112.1| ABC transporter protein [Pusillimonas sp. T7... 548 e-154 ref|YP_004157651.1| ABC transporter [Variovorax paradoxus EPS] >... 516 e-144 ref|ZP_08873186.1| ABC transporter [Verminephrobacter sp. At4] 497 e-138 ref|YP_548106.1| ABC transporter-like protein [Polaromonas sp. J... 496 e-138 >ref|YP_003776726.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ64818.1| ABC-type sugar transport systems, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 361 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 353/363 (97%), Positives = 358/363 (98%), Gaps = 2/363 (0%) Query: 31 MASVQIRAVKKQFGSTQIIRGVDIDIADGEFTVLVGPSGCGKSTLLRMLAGLEEITGGEI 90 MASVQIRAVKKQFGSTQIIRGVDIDIADGEFTVLVGPSGCGKSTLLRMLAGLEEITGGEI Sbjct: 1 MASVQIRAVKKQFGSTQIIRGVDIDIADGEFTVLVGPSGCGKSTLLRMLAGLEEITGGEI 60 Query: 91 LIGGTVVNNVQPKDRDIAMVFQNYALYPHMTVRDNMAFSLTLAKKDKSFVEERVKKAADI 150 LIGGTVVNNVQPKDRDIAMVFQNYALYPHMTVRDNMAFSLTLAKKDK+FV+ERVKKAADI Sbjct: 61 LIGGTVVNNVQPKDRDIAMVFQNYALYPHMTVRDNMAFSLTLAKKDKAFVDERVKKAADI 120 Query: 151 LGLNQLLDRYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRTEIKELH 210 LGLNQLLDRYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRTEIKELH Sbjct: 121 LGLNQLLDRYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRTEIKELH 180 Query: 211 QRLKTTSIYVTHDQIEAMTMADQIVVMRDGLVEQRGRPLDLYDHPANLFVAGFIGSPAMN 270 QRLKTTSIYVTHDQIEAMTMADQIVVMRDGLVEQRGRPLDLYD+PANLFVAGFIGSPAMN Sbjct: 181 QRLKTTSIYVTHDQIEAMTMADQIVVMRDGLVEQRGRPLDLYDYPANLFVAGFIGSPAMN 240 Query: 271 FIPATLRRNGGGGAAEVEFADGTRVPAPYGSALQGNDGQKVTYGVRPEHLSIGAAGQGIA 330 FIPATLRRN G AEVEFADGTRVPAPYG+ALQGNDGQKVTYGVRPEHLSIGAAGQGIA Sbjct: 241 FIPATLRRNATG--AEVEFADGTRVPAPYGAALQGNDGQKVTYGVRPEHLSIGAAGQGIA 298 Query: 331 TKVIVVEPTGADTEVFSRFGETSLTSIFRERHDFGAGDVIHLVPDHSRTHLFDAESGKSL 390 TKVIVVEPTGADTEVFSRFG+TSLTSIFRERHDFGAGDVIHLVPDHSRTHLFDAESGKSL Sbjct: 299 TKVIVVEPTGADTEVFSRFGDTSLTSIFRERHDFGAGDVIHLVPDHSRTHLFDAESGKSL 358 Query: 391 AAR 393 A R Sbjct: 359 AGR 361 >ref|YP_004417112.1| ABC transporter protein [Pusillimonas sp. T7-7] gb|AEC20488.1| ABC transporter protein [Pusillimonas sp. T7-7] Length = 360 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 274/363 (75%), Positives = 311/363 (85%), Gaps = 3/363 (0%) Query: 31 MASVQIRAVKKQFGSTQIIRGVDIDIADGEFTVLVGPSGCGKSTLLRMLAGLEEITGGEI 90 MASVQIR V+K FG TQ+IRGVDIDI DG+F VLVGPSGCGKSTLLRMLAGLEEIT GEI Sbjct: 1 MASVQIRGVQKYFGGTQVIRGVDIDIEDGQFAVLVGPSGCGKSTLLRMLAGLEEITEGEI 60 Query: 91 LIGGTVVNNVQPKDRDIAMVFQNYALYPHMTVRDNMAFSLTLAKKDKSFVEERVKKAADI 150 IGG VVN++ PK+RDIAMVFQNYALYPHM+V DNMAFSL LAK +KS V+ERV +A+ I Sbjct: 61 SIGGKVVNDMPPKERDIAMVFQNYALYPHMSVYDNMAFSLMLAKVEKSAVKERVDRASSI 120 Query: 151 LGLNQLLDRYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRTEIKELH 210 LGLN LLDRYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMR EI+ELH Sbjct: 121 LGLNNLLDRYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRAEIRELH 180 Query: 211 QRLKTTSIYVTHDQIEAMTMADQIVVMRDGLVEQRGRPLDLYDHPANLFVAGFIGSPAMN 270 QRL+TTS+YVTHDQIEAMTMADQIVVMRDG+VEQRGRPLDLYDHPANLFVAGFIGSPAMN Sbjct: 181 QRLRTTSVYVTHDQIEAMTMADQIVVMRDGVVEQRGRPLDLYDHPANLFVAGFIGSPAMN 240 Query: 271 FIPATLRRNGGGGAAEVEFADGTRVPAPYGSALQGNDGQKVTYGVRPEHLSIGAAGQGIA 330 F+P LR G +VE +DGTR+P P G A G +GQ+V YGVRPEHL I A QGI Sbjct: 241 FLPGVLRAE--GSEKQVELSDGTRLPVPQGIA-AGTEGQRVIYGVRPEHLIIQAGTQGIK 297 Query: 331 TKVIVVEPTGADTEVFSRFGETSLTSIFRERHDFGAGDVIHLVPDHSRTHLFDAESGKSL 390 T+V+V+EPTGA+TE+ R + + ++FRERH+F G+ + LVPDH+ THLFDAE+G+SL Sbjct: 298 TEVVVIEPTGANTEIHCRSSDADIVAVFRERHNFAPGETLVLVPDHNNTHLFDAETGQSL 357 Query: 391 AAR 393 A + Sbjct: 358 AKQ 360 >ref|YP_004157651.1| ABC transporter [Variovorax paradoxus EPS] gb|ADU39540.1| ABC transporter related protein [Variovorax paradoxus EPS] Length = 357 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 264/362 (72%), Positives = 300/362 (82%), Gaps = 5/362 (1%) Query: 31 MASVQIRAVKKQFGSTQIIRGVDIDIADGEFTVLVGPSGCGKSTLLRMLAGLEEITGGEI 90 MASV I+AVKK+FG I+ GVDIDIADG FTVLVGPSGCGKSTLLRM+AGLEEI GGEI Sbjct: 1 MASVTIQAVKKRFGEVAILHGVDIDIADGSFTVLVGPSGCGKSTLLRMIAGLEEIHGGEI 60 Query: 91 LIGGTVVNNVQPKDRDIAMVFQNYALYPHMTVRDNMAFSLTLAKKDKSFVEERVKKAADI 150 IG VN++ PK+RDIAMVFQNYALYPHMTVRDNMAF+L+LAK DK+ ++ +V++AA+I Sbjct: 61 RIGERRVNDLPPKERDIAMVFQNYALYPHMTVRDNMAFALSLAKMDKATIDSKVQRAAEI 120 Query: 151 LGLNQLLDRYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRTEIKELH 210 L L LL+RYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRV MR+EIKELH Sbjct: 121 LALAPLLERYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVAMRSEIKELH 180 Query: 211 QRLKTTSIYVTHDQIEAMTMADQIVVMRDGLVEQRGRPLDLYDHPANLFVAGFIGSPAMN 270 QRLKTTSIYVTHDQIEAMTM D+IVVMRDG +EQ G PLDLYDHPAN FVAGFIGSPAMN Sbjct: 181 QRLKTTSIYVTHDQIEAMTMGDKIVVMRDGRIEQTGSPLDLYDHPANQFVAGFIGSPAMN 240 Query: 271 FIPATLRRNGGGGAAEVEFADGTRVPAPYGSALQGNDGQKVTYGVRPEHLSIGAAGQGIA 330 F+P TLRR GGAA VE DGTR+ AP + G DGQ V YG RPEHL++G +G GI Sbjct: 241 FLPGTLRR--AGGAAHVELPDGTRLDAPLHAG--GTDGQPVVYGTRPEHLTLGDSG-GIP 295 Query: 331 TKVIVVEPTGADTEVFSRFGETSLTSIFRERHDFGAGDVIHLVPDHSRTHLFDAESGKSL 390 ++V+V+EPTG DT V R L+++FRER+DF G IHL+PD +R HLFDAESG L Sbjct: 296 SRVVVMEPTGMDTFVACRHEGAELSAVFRERYDFAPGSTIHLLPDLARAHLFDAESGLRL 355 Query: 391 AA 392 A Sbjct: 356 VA 357 >ref|ZP_08873186.1| ABC transporter [Verminephrobacter sp. At4] Length = 363 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 259/366 (70%), Positives = 293/366 (80%), Gaps = 6/366 (1%) Query: 29 HLMASVQIRAVKKQFGSTQIIRGVDIDIADGEFTVLVGPSGCGKSTLLRMLAGLEEITGG 88 H MASV IR+VKK FG ++ GVDIDI DG FTVLVGPSGCGKSTLLRM+AGLEEI GG Sbjct: 2 HFMASVTIRSVKKNFGDVAVLHGVDIDIHDGSFTVLVGPSGCGKSTLLRMIAGLEEINGG 61 Query: 89 EILIGGTVVNNVQPKDRDIAMVFQNYALYPHMTVRDNMAFSLTLAKKDKSFVEERVKKAA 148 +ILIG VN++ PKDRDIAMVFQNYALYPHMTVR+NMAF+LTLAK K+ +E +V++AA Sbjct: 62 DILIGERRVNDLPPKDRDIAMVFQNYALYPHMTVRNNMAFALTLAKTAKATIEAKVQRAA 121 Query: 149 DILGLNQLLDRYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRTEIKE 208 +IL L LL+RYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRV MR+EIKE Sbjct: 122 EILALAPLLERYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVAMRSEIKE 181 Query: 209 LHQRLKTTSIYVTHDQIEAMTMADQIVVMRDGLVEQRGRPLDLYDHPANLFVAGFIGSPA 268 LHQRLKTTSIYVTHDQIEAMTM D+IVVMRDG +EQ G PLDLYDHPAN FVAGFIGSPA Sbjct: 182 LHQRLKTTSIYVTHDQIEAMTMGDKIVVMRDGRIEQTGSPLDLYDHPANQFVAGFIGSPA 241 Query: 269 MNFIPATLRRNGGGGAAEVEFADGTRVPAPYGSALQGNDGQKVTYGVRPEHLS-IGAAGQ 327 MNF+P TLR GAA VE DGT++ AP + G DGQ V YG RPEHLS + G Sbjct: 242 MNFLPGTLRVR--EGAARVELRDGTQLNAPLQTG--GVDGQPVIYGTRPEHLSLVSDGGD 297 Query: 328 GIATKVIVVEPTGADTEVFSRFGE-TSLTSIFRERHDFGAGDVIHLVPDHSRTHLFDAES 386 GI +V+V+EPTG DT V R T L+++FRER+DF G I L PD R HLFDA + Sbjct: 298 GIPAQVVVMEPTGMDTFVACRHHHGTELSAVFRERYDFAPGSSIRLQPDLQRAHLFDAGT 357 Query: 387 GKSLAA 392 G+ L+A Sbjct: 358 GQRLSA 363 >ref|YP_548106.1| ABC transporter-like protein [Polaromonas sp. JS666] gb|ABE43208.1| carbohydrate ABC transporter ATP-binding protein, CUT1 family [Polaromonas sp. JS666] Length = 357 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 255/362 (70%), Positives = 291/362 (80%), Gaps = 5/362 (1%) Query: 31 MASVQIRAVKKQFGSTQIIRGVDIDIADGEFTVLVGPSGCGKSTLLRMLAGLEEITGGEI 90 MA V IRAVKK FG I+ GVDI+I DG FTVLVGPSGCGKSTLLRM+AGLE+I+GGEI Sbjct: 1 MAGVTIRAVKKNFGEVPILHGVDIEIQDGSFTVLVGPSGCGKSTLLRMIAGLEQISGGEI 60 Query: 91 LIGGTVVNNVQPKDRDIAMVFQNYALYPHMTVRDNMAFSLTLAKKDKSFVEERVKKAADI 150 IG VN++ PK RDIAMVFQNYALYPHMTVR+NMAFSL LAK+DK+ + +V +AA+I Sbjct: 61 RIGDKRVNDLPPKARDIAMVFQNYALYPHMTVRENMAFSLELAKQDKATIASKVARAAEI 120 Query: 151 LGLNQLLDRYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRTEIKELH 210 L L LL+RYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRV MR+EIKELH Sbjct: 121 LALGALLERYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVAMRSEIKELH 180 Query: 211 QRLKTTSIYVTHDQIEAMTMADQIVVMRDGLVEQRGRPLDLYDHPANLFVAGFIGSPAMN 270 RLKTTSIYVTHDQIEAMTM D+IVVMRDG +EQ G PLDLYDHPAN FVAGFIGSPAMN Sbjct: 181 LRLKTTSIYVTHDQIEAMTMGDKIVVMRDGRIEQTGSPLDLYDHPANQFVAGFIGSPAMN 240 Query: 271 FIPATLRRNGGGGAAEVEFADGTRVPAPYGSALQGNDGQKVTYGVRPEHLSIGAAGQGIA 330 F+P TL+R GG+A +E DGT++ AP S G DGQ V +G RPEHL++ AG GI Sbjct: 241 FLPGTLKR--AGGSARIELGDGTQLDAPPRSG--GADGQPVIFGTRPEHLTLVDAG-GIP 295 Query: 331 TKVIVVEPTGADTEVFSRFGETSLTSIFRERHDFGAGDVIHLVPDHSRTHLFDAESGKSL 390 V+V+EPTG DT + R L+++FRERHDF G IHL+PD R HLFDA +G+ L Sbjct: 296 AHVVVMEPTGMDTFIACRHEGVDLSAVFRERHDFAPGRTIHLLPDLQRAHLFDASTGQRL 355 Query: 391 AA 392 AA Sbjct: 356 AA 357