BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4186.p (185 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776717.1| transmembrane protein [Herbaspirillum serope... 289 1e-76 ref|YP_001099074.1| putative lipoprotein [Herminiimonas arsenico... 202 1e-50 ref|YP_001352372.1| hypothetical protein mma_0682 [Janthinobacte... 200 1e-49 ref|YP_004754202.1| putative lipoprotein [Collimonas fungivorans... 186 1e-45 ref|YP_003168051.1| NLP/P60 protein [Candidatus Accumulibacter p... 179 1e-43 >ref|YP_003776717.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64809.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 189 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 160/189 (84%), Positives = 164/189 (86%), Gaps = 4/189 (2%) Query: 1 MAGRARMALTHRAAAPSSRSALAAVCAALVLAAC----GTAPTAPPITRLPGAPQSQVPA 56 M GR R+A A APS S LAA C A+ A T PTAPPI RLPGAPQSQ PA Sbjct: 1 MTGRVRIASMRMAVAPSCLSPLAARCTAVCAALVLAACSTTPTAPPIERLPGAPQSQAPA 60 Query: 57 LPATDNGNEVALYALSLIDTGYRFGGKNPSAGLDCSGMVSYIFGQAANYRISGSAADIAR 116 LPAT+NGNEVALYALSLIDTGYRFGGKNPSAGLDCSGMVSYIFGQAANYRISGSAADIAR Sbjct: 61 LPATENGNEVALYALSLIDTGYRFGGKNPSAGLDCSGMVSYIFGQAANYRISGSAADIAR 120 Query: 117 KGRQIDPSQLRAGDLVFFNTQNRPFSHVGIYLGDGRFVHAPSTNGKVHITRMDNPYFSRR 176 +GRQIDPSQLRAGDLVFFNT NRPFSHVGIYLGDGRFVHAPSTNGKVHITRMDNPYFSRR Sbjct: 121 QGRQIDPSQLRAGDLVFFNTMNRPFSHVGIYLGDGRFVHAPSTNGKVHITRMDNPYFSRR 180 Query: 177 FEMARTYFN 185 FEMARTYFN Sbjct: 181 FEMARTYFN 189 >ref|YP_001099074.1| putative lipoprotein [Herminiimonas arsenicoxydans] emb|CAL60947.1| Conserved hypothetical protein, putative lipoprotein [Herminiimonas arsenicoxydans] Length = 176 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 99/152 (65%), Positives = 121/152 (79%), Gaps = 4/152 (2%) Query: 34 CGTAPTAPPITRLPGAPQSQVPALPATDNGNEVALYALSLIDTGYRFGGKNPSAGLDCSG 93 CGT+ P+ R GA P ++ GNEVALYA+ +IDTGY+FGGKNP AGLDCSG Sbjct: 29 CGTSS---PVKR-QGAQAILYEPQPVSEKGNEVALYAMGMIDTGYQFGGKNPEAGLDCSG 84 Query: 94 MVSYIFGQAANYRISGSAADIARKGRQIDPSQLRAGDLVFFNTQNRPFSHVGIYLGDGRF 153 MVSYI+G+A + +++GSAADIAR+G++IDP LR GDLVFFNT NR FSHVG+Y+GDGRF Sbjct: 85 MVSYIYGKAVDLKVTGSAADIARRGKEIDPRTLRPGDLVFFNTLNRSFSHVGVYIGDGRF 144 Query: 154 VHAPSTNGKVHITRMDNPYFSRRFEMARTYFN 185 +HAPS+ GKV I RMDN YF+ RFEMARTYF+ Sbjct: 145 IHAPSSKGKVRIERMDNLYFAPRFEMARTYFD 176 >ref|YP_001352372.1| hypothetical protein mma_0682 [Janthinobacterium sp. Marseille] gb|ABR90363.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 176 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 108/174 (62%), Positives = 130/174 (74%), Gaps = 4/174 (2%) Query: 12 RAAAPSSRSALAAVCAALVLAACGTAPTAPPITRLPGAPQSQVPALPATDNGNEVALYAL 71 R + S R A+ A +LAACGT+ P+ R P A P ++ GNE+ALYA+ Sbjct: 7 RTSIASLRGLFVALLATALLAACGTST---PVKR-PAARAIMYEPQPVSEKGNEIALYAM 62 Query: 72 SLIDTGYRFGGKNPSAGLDCSGMVSYIFGQAANYRISGSAADIARKGRQIDPSQLRAGDL 131 +IDTGY+FGGKNP AGLDCSGMVSYI+ QA N +SGSAADIAR+G++IDP LR GDL Sbjct: 63 GMIDTGYQFGGKNPEAGLDCSGMVSYIYRQALNMNVSGSAADIARRGKEIDPRTLRPGDL 122 Query: 132 VFFNTQNRPFSHVGIYLGDGRFVHAPSTNGKVHITRMDNPYFSRRFEMARTYFN 185 VFFNT NR FSHVG+Y+GDGRF+HAPS+ GKV I RMDN YF+ RFEMARTYF+ Sbjct: 123 VFFNTMNRSFSHVGVYIGDGRFIHAPSSKGKVRIERMDNVYFAPRFEMARTYFD 176 >ref|YP_004754202.1| putative lipoprotein [Collimonas fungivorans Ter331] gb|AEK63379.1| putative lipoprotein [Collimonas fungivorans Ter331] Length = 167 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 85/128 (66%), Positives = 106/128 (82%) Query: 58 PATDNGNEVALYALSLIDTGYRFGGKNPSAGLDCSGMVSYIFGQAANYRISGSAADIARK 117 P +D GN++ +Y+L LIDT YRFGGKNP AGLDCSGMVSY++ QAA +++GSAADIAR+ Sbjct: 40 PVSDKGNDIVIYSLGLIDTNYRFGGKNPEAGLDCSGMVSYVYRQAAGLKVTGSAADIARQ 99 Query: 118 GRQIDPSQLRAGDLVFFNTQNRPFSHVGIYLGDGRFVHAPSTNGKVHITRMDNPYFSRRF 177 GR I ++LR GDLVFFNT +R FSHVGIY+GDGRF++APSTNGKV I R+DN Y++ RF Sbjct: 100 GRSISKAELRPGDLVFFNTMHRAFSHVGIYIGDGRFINAPSTNGKVRIDRLDNSYYAARF 159 Query: 178 EMARTYFN 185 E R YF+ Sbjct: 160 EAVRRYFD 167 >ref|YP_003168051.1| NLP/P60 protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gb|ACV36122.1| NLP/P60 protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 164 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 96/164 (58%), Positives = 119/164 (72%), Gaps = 5/164 (3%) Query: 22 LAAVCAALVLAACGTAPTAPPITRLPGAPQSQVPALPATDNGNEVALYALSLIDTGYRFG 81 L A +L+LAACG+ P AP P V + ++V +YALSLIDT YRFG Sbjct: 6 LIACLVSLLLAACGSTPPAPE-----RQPPKSVERPAGSAKAHDVVIYALSLIDTDYRFG 60 Query: 82 GKNPSAGLDCSGMVSYIFGQAANYRISGSAADIARKGRQIDPSQLRAGDLVFFNTQNRPF 141 GKNP AGLDCSGMVSYI+G+AA ++SGSAADIAR+GR ID LR GDLVFFNT+N F Sbjct: 61 GKNPDAGLDCSGMVSYIYGRAAGVKVSGSAADIARRGRPIDRDGLRPGDLVFFNTRNASF 120 Query: 142 SHVGIYLGDGRFVHAPSTNGKVHITRMDNPYFSRRFEMARTYFN 185 SHVGIY+GD RFVHAPS+ G+V I ++ Y+++RFE AR+YF+ Sbjct: 121 SHVGIYIGDDRFVHAPSSTGRVRIDQLGARYYAQRFETARSYFD 164