BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4184.p (668 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776714.1| nucleoside-diphosphate-sugar epimerase [Herb... 479 e-133 ref|ZP_08274397.1| putative nucleoside-diphosphate-sugar epimera... 411 e-112 ref|YP_001352375.1| hypothetical protein mma_0685 [Janthinobacte... 389 e-105 ref|YP_001099077.1| putative nucleoside-diphosphate-sugar epimer... 384 e-104 ref|YP_004754198.1| nucleoside-diphosphate-sugar epimerase [Coll... 372 e-101 >ref|YP_003776714.1| nucleoside-diphosphate-sugar epimerase [Herbaspirillum seropedicae SmR1] gb|ADJ64806.1| nucleoside-diphosphate-sugar epimerase protein [Herbaspirillum seropedicae SmR1] Length = 293 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 265/292 (90%), Positives = 279/292 (95%) Query: 373 VKKLGLPRVLILGCGDVGLRLVPLLLPRYRVLAVTSNPGRRAELRAAGAIPIVADLDAPL 432 +KKLGLPRVLILGCGDVGLRL+PLLLPRYRVLAVTSNP R AELRAAGA+PIVADLDAP Sbjct: 1 MKKLGLPRVLILGCGDVGLRLLPLLLPRYRVLAVTSNPERCAELRAAGAVPIVADLDAPH 60 Query: 433 TLGRLARLAPTIVHLAPPQSEGRIDRRTRNLAAILPEGARLVYVSTTGVYGDCAGASFDE 492 TLGRLARLAPTIVHLAPPQSEGRIDRRTRNLAAILPEGARLVY+STTGVYGDCAGASFDE Sbjct: 61 TLGRLARLAPTIVHLAPPQSEGRIDRRTRNLAAILPEGARLVYISTTGVYGDCAGASFDE 120 Query: 493 TRSVHPQNTRAVRRVDAETVLRAWARRRHGKFSILRVPGIYAADRLPLERLHKGLPALLA 552 TR V+PQNTRAVRRVDAETVLRAWARRRHGK SILRVPGIYAADRLPLERLHKGLPALLA Sbjct: 121 TRRVNPQNTRAVRRVDAETVLRAWARRRHGKLSILRVPGIYAADRLPLERLHKGLPALLA 180 Query: 553 AEDVYTNHIQADDLARVAAAALRLGAPNRIYHAVDDTDLKMGDYFDAVADAAGLSRPPRL 612 EDV+TNHI ADDLARV+ AALRLGAPNR+YHAVDDT+LKMGDYFDAVADAAGL+RPPRL Sbjct: 181 QEDVHTNHIHADDLARVSLAALRLGAPNRLYHAVDDTELKMGDYFDAVADAAGLARPPRL 240 Query: 613 PRSELERSVSPMMLSFMSESRRLHNARIKNELGVRLRYPDVQSLLTQWREQR 664 PR+ELERSVSPMMLSFMSESRRL N RIK ELGVRLRYPDVQSLL++W+ R Sbjct: 241 PRAELERSVSPMMLSFMSESRRLQNRRIKEELGVRLRYPDVQSLLSEWKLTR 292 >ref|ZP_08274397.1| putative nucleoside-diphosphate-sugar epimerase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32136.1| putative nucleoside-diphosphate-sugar epimerase [Oxalobacteraceae bacterium IMCC9480] Length = 363 Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats. Identities = 227/330 (68%), Positives = 259/330 (78%), Gaps = 2/330 (0%) Query: 328 QADAGADGGREDGFAGVAGELATAGLDCDLETHTILLLDKFGLNTVKKLGLPRVLILGCG 387 QADAGAD +DGF G A EL A D +LE+HTI ++K T KK+GLPRVLI+GCG Sbjct: 27 QADAGADCRGQDGFIGSAAELVAARSDGNLESHTIPNMNKS--LTTKKIGLPRVLIIGCG 84 Query: 388 DVGLRLVPLLLPRYRVLAVTSNPGRRAELRAAGAIPIVADLDAPLTLGRLARLAPTIVHL 447 DVG+RL+PLL R+RV AVTS PGR AELRAAGAIPIVA+LD P +L RL+RLA +VHL Sbjct: 85 DVGMRLLPLLRARFRVFAVTSQPGRIAELRAAGAIPIVANLDEPHSLARLSRLARHVVHL 144 Query: 448 APPQSEGRIDRRTRNLAAILPEGARLVYVSTTGVYGDCAGASFDETRSVHPQNTRAVRRV 507 APPQSEG DRRTRNL AILP+ A +VYVST+GVYGDC GA DETR V+P N RA RRV Sbjct: 145 APPQSEGTTDRRTRNLFAILPDAATVVYVSTSGVYGDCGGALIDETRPVNPVNARARRRV 204 Query: 508 DAETVLRAWARRRHGKFSILRVPGIYAADRLPLERLHKGLPALLAAEDVYTNHIQADDLA 567 DAE VLR WARR HG+ ILRVPGIY ADRLPLERL KG PAL+AA+DVYTNHI ADDLA Sbjct: 205 DAEQVLRRWARRAHGRLGILRVPGIYGADRLPLERLRKGTPALVAADDVYTNHIHADDLA 264 Query: 568 RVAAAALRLGAPNRIYHAVDDTDLKMGDYFDAVADAAGLSRPPRLPRSELERSVSPMMLS 627 R+ A AL PNR+ H VDD+ +KMG+YFDAVADA + RPPRLPR+EL VSPM+LS Sbjct: 265 RIIATALFRLQPNRVVHTVDDSAMKMGEYFDAVADAFDMPRPPRLPRTELRELVSPMLLS 324 Query: 628 FMSESRRLHNARIKNELGVRLRYPDVQSLL 657 FMSESR+L N R+K ELGVRL+YP V L Sbjct: 325 FMSESRQLSNRRLKQELGVRLQYPTVADAL 354 >ref|YP_001352375.1| hypothetical protein mma_0685 [Janthinobacterium sp. Marseille] gb|ABR90804.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 301 Score = 389 bits (999), Expect = e-105, Method: Composition-based stats. Identities = 206/289 (71%), Positives = 228/289 (78%) Query: 374 KKLGLPRVLILGCGDVGLRLVPLLLPRYRVLAVTSNPGRRAELRAAGAIPIVADLDAPLT 433 K G PR+LILGCGDVG+RL+PLL R+R+ AVT+ R+ ELRAAGAIPI+A LD P T Sbjct: 8 KHFGKPRLLILGCGDVGMRLLPLLRDRFRIFAVTTQVSRQEELRAAGAIPIIASLDEPAT 67 Query: 434 LGRLARLAPTIVHLAPPQSEGRIDRRTRNLAAILPEGARLVYVSTTGVYGDCAGASFDET 493 L RLARL+P I+HLAPPQSEG ID+RTRNL AILP+ A LVYVST+GVYGDC G ET Sbjct: 68 LARLARLSPYIIHLAPPQSEGSIDKRTRNLTAILPDHATLVYVSTSGVYGDCGGEWITET 127 Query: 494 RSVHPQNTRAVRRVDAETVLRAWARRRHGKFSILRVPGIYAADRLPLERLHKGLPALLAA 553 R+V+P+N RA RRVDAE VLR WARR G+ ILRVPGIYA DRLPLERL KGLPALL A Sbjct: 128 RAVNPRNLRARRRVDAEQVLRKWARRASGRLGILRVPGIYADDRLPLERLQKGLPALLEA 187 Query: 554 EDVYTNHIQADDLARVAAAALRLGAPNRIYHAVDDTDLKMGDYFDAVADAAGLSRPPRLP 613 EDVYTNHI ADDLAR+ AL R+YHAVDDTDLKMG YFDAVADA L RPPRLP Sbjct: 188 EDVYTNHIHADDLARIIVLALFRAQSGRVYHAVDDTDLKMGAYFDAVADALALPRPPRLP 247 Query: 614 RSELERSVSPMMLSFMSESRRLHNARIKNELGVRLRYPDVQSLLTQWRE 662 R+ELER VSPMMLSFMSESRRL N RIK ELGVRLRY V L ++ Sbjct: 248 RAELEREVSPMMLSFMSESRRLSNQRIKAELGVRLRYARVGDALAGLKD 296 >ref|YP_001099077.1| putative nucleoside-diphosphate-sugar epimerases [Herminiimonas arsenicoxydans] emb|CAL60950.1| putative nucleoside-diphosphate-sugar epimerase [Herminiimonas arsenicoxydans] Length = 304 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 197/285 (69%), Positives = 224/285 (78%) Query: 375 KLGLPRVLILGCGDVGLRLVPLLLPRYRVLAVTSNPGRRAELRAAGAIPIVADLDAPLTL 434 K G PR+LILGCGDVG+RL+PLL R+R+ AVT+ R+ LRAAGAIPI+A+LD P TL Sbjct: 13 KFGKPRLLILGCGDVGMRLLPLLCTRFRIFAVTTQASRQDALRAAGAIPIIANLDQPATL 72 Query: 435 GRLARLAPTIVHLAPPQSEGRIDRRTRNLAAILPEGARLVYVSTTGVYGDCAGASFDETR 494 RLARLA I+HLAPPQS+G IDRRTRNL +ILP+ A LVYVST+GVYGDC GA DETR Sbjct: 73 ARLARLAQNIIHLAPPQSDGSIDRRTRNLTSILPDHAVLVYVSTSGVYGDCGGACIDETR 132 Query: 495 SVHPQNTRAVRRVDAETVLRAWARRRHGKFSILRVPGIYAADRLPLERLHKGLPALLAAE 554 +V P N RA RRVDAE VLR WARR + ILRVPGIYA DRLPLERL KGLPAL A E Sbjct: 133 TVQPHNLRATRRVDAEQVLRNWARRSQSRLGILRVPGIYAGDRLPLERLQKGLPALAADE 192 Query: 555 DVYTNHIQADDLARVAAAALRLGAPNRIYHAVDDTDLKMGDYFDAVADAAGLSRPPRLPR 614 DVYTNHI ADDLA+V A AL P R+YHAVDD+++KMG YFDAVADA L RPPRL R Sbjct: 193 DVYTNHIHADDLAQVIALALFRAQPGRVYHAVDDSEMKMGSYFDAVADAFALERPPRLTR 252 Query: 615 SELERSVSPMMLSFMSESRRLHNARIKNELGVRLRYPDVQSLLTQ 659 +L +VSPMMLSFMSESRR+ N R+K ELG+RLR+P V L Q Sbjct: 253 EKLRYAVSPMMLSFMSESRRMSNQRMKAELGMRLRHPTVAHALKQ 297 >ref|YP_004754198.1| nucleoside-diphosphate-sugar epimerase [Collimonas fungivorans Ter331] gb|AEK63375.1| Nucleoside-diphosphate-sugar epimerase [Collimonas fungivorans Ter331] Length = 311 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 201/279 (72%), Positives = 223/279 (79%) Query: 375 KLGLPRVLILGCGDVGLRLVPLLLPRYRVLAVTSNPGRRAELRAAGAIPIVADLDAPLTL 434 KLG PR+LI GCGDVGLRL+ LL R+RV AVTS P R AELRAAGA+P+VADLD P TL Sbjct: 16 KLGKPRLLIFGCGDVGLRLLALLTQRFRVFAVTSQPARCAELRAAGAVPLVADLDQPATL 75 Query: 435 GRLARLAPTIVHLAPPQSEGRIDRRTRNLAAILPEGARLVYVSTTGVYGDCAGASFDETR 494 RLARLA +VHLAPPQS G DRR+RNLAAILPE A LVY+STTGVYGDC GA DETR Sbjct: 76 ARLARLAQIVVHLAPPQSAGEKDRRSRNLAAILPERATLVYISTTGVYGDCGGALIDETR 135 Query: 495 SVHPQNTRAVRRVDAETVLRAWARRRHGKFSILRVPGIYAADRLPLERLHKGLPALLAAE 554 + P N RA RRVDAE VLR WARRR G+ +ILRVPGIYAADRLPL RL K PAL+AA+ Sbjct: 136 MLAPHNGRARRRVDAEQVLRGWARRRSGRLAILRVPGIYAADRLPLARLQKATPALIAAD 195 Query: 555 DVYTNHIQADDLARVAAAALRLGAPNRIYHAVDDTDLKMGDYFDAVADAAGLSRPPRLPR 614 DVYTNHI ADDLAR+ AA+ AP R+YHA DD+ LKM +YFD VA+A L PRLPR Sbjct: 196 DVYTNHIHADDLARIIVAAIFKAAPLRVYHASDDSQLKMAEYFDLVAEAFSLPPSPRLPR 255 Query: 615 SELERSVSPMMLSFMSESRRLHNARIKNELGVRLRYPDV 653 +ELE+ VSPM+LSFMSESRRL N RIK ELGVRLRY DV Sbjct: 256 AELEQVVSPMLLSFMSESRRLQNRRIKLELGVRLRYADV 294