BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4183.p         (162 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776713.1| ABC transporter ATPase [Herbaspirillum serop...   268   2e-70
ref|YP_004415980.1| putative ABC-transport protein, ATP-binding ...   220   5e-56
ref|YP_004754197.1| putative ABC-transport protein, ATP-binding ...   211   4e-53
ref|ZP_06688087.1| aliphatic sulfonates ABC superfamily ATP bind...   207   3e-52
ref|YP_003979461.1| ABC transporter [Achromobacter xylosoxidans ...   204   3e-51

>ref|YP_003776713.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1]
 gb|ADJ64805.1| ABC-type transport system, ATPase component protein [Herbaspirillum
           seropedicae SmR1]
          Length = 257

 Score =  268 bits (684), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 127/139 (91%), Positives = 133/139 (95%)

Query: 1   MKLSFNNVAKRFGDLHVIEEFTREIASGELVALVGPSGCGKSTLLHMAAGLEKASSGTVS 60
           MKLSFNNVAK FGDLHVIEEFTREIASGELVALVGPSGCGKSTLLHMAAGLEK SSG+V+
Sbjct: 1   MKLSFNNVAKHFGDLHVIEEFTREIASGELVALVGPSGCGKSTLLHMAAGLEKPSSGSVA 60

Query: 61  ADGQAIRGPHPERTLMFQENALYPWLTLQQNVALALEFQNVDKKKSADQARVWLEKVKLK 120
            DGQ IRGPHPERTLMFQENALYPWLTLQQNVALALEFQ+VDKKK+A+QARVWLE VKLK
Sbjct: 61  GDGQTIRGPHPERTLMFQENALYPWLTLQQNVALALEFQSVDKKKAAEQARVWLENVKLK 120

Query: 121 GFENYYPHQVSGGMRQRRA 139
           GFE+YYPHQVSGGMRQR A
Sbjct: 121 GFEHYYPHQVSGGMRQRAA 139


>ref|YP_004415980.1| putative ABC-transport protein, ATP-binding component [Pusillimonas
           sp. T7-7]
 gb|AEC19356.1| putative ABC-transport protein, ATP-binding component [Pusillimonas
           sp. T7-7]
          Length = 257

 Score =  220 bits (561), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 104/139 (74%), Positives = 117/139 (84%)

Query: 1   MKLSFNNVAKRFGDLHVIEEFTREIASGELVALVGPSGCGKSTLLHMAAGLEKASSGTVS 60
           MKLSF N+ K F  L VIE+F+R+I SGELVALVGPSGCGKSTLLH+AAGLE  S G + 
Sbjct: 1   MKLSFQNIEKEFSGLRVIEDFSRDIESGELVALVGPSGCGKSTLLHIAAGLETPSGGAML 60

Query: 61  ADGQAIRGPHPERTLMFQENALYPWLTLQQNVALALEFQNVDKKKSADQARVWLEKVKLK 120
           ADG +I+GPHPERTLMFQENALYPWLTL QNVALALEFQ +D++K+  QA  WL KV LK
Sbjct: 61  ADGASIQGPHPERTLMFQENALYPWLTLAQNVALALEFQKIDRQKALKQASEWLSKVNLK 120

Query: 121 GFENYYPHQVSGGMRQRRA 139
           GFENY+PHQVSGGMRQR A
Sbjct: 121 GFENYFPHQVSGGMRQRAA 139


>ref|YP_004754197.1| putative ABC-transport protein, ATP-binding component [Collimonas
           fungivorans Ter331]
 gb|AEK63374.1| putative ABC-transport protein, ATP-binding component [Collimonas
           fungivorans Ter331]
          Length = 257

 Score =  211 bits (536), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 109/161 (67%), Positives = 120/161 (74%), Gaps = 5/161 (3%)

Query: 1   MKLSFNNVAKRFGDLHVIEEFTREIASGELVALVGPSGCGKSTLLHMAAGLEKASSGTVS 60
           MKLSF +V K+F  L VI +F+REI  GELVALVGPSGCGKSTLLH+AAGL  ASSG V 
Sbjct: 1   MKLSFKHVNKQFSGLPVIADFSREIEEGELVALVGPSGCGKSTLLHLAAGLGAASSGAVL 60

Query: 61  ADGQAIRGPHPERTLMFQENALYPWLTLQQNVALALEFQNVDKKKSADQARVWLEKVKLK 120
           ADGQAI+GPHPER LMFQENALYPWLTL+ NVALALE Q V K  +  QAR WL KV L+
Sbjct: 61  ADGQAIKGPHPERMLMFQENALYPWLTLEANVALALELQKVGKASARQQARDWLSKVSLQ 120

Query: 121 GFENYYPHQVSGGMRQRRAPSSRSPRRCCWTSPSVRSMRSP 161
           GFE YYPHQVSGGMRQR A +     R   T P V  +  P
Sbjct: 121 GFEAYYPHQVSGGMRQRAALA-----RAFITKPKVLLLDEP 156


>ref|ZP_06688087.1| aliphatic sulfonates ABC superfamily ATP binding cassette
           transporter, ABC protein [Achromobacter piechaudii ATCC
           43553]
 gb|EFF74993.1| aliphatic sulfonates ABC superfamily ATP binding cassette
           transporter, ABC protein [Achromobacter piechaudii ATCC
           43553]
          Length = 256

 Score =  207 bits (528), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 97/139 (69%), Positives = 117/139 (84%)

Query: 1   MKLSFNNVAKRFGDLHVIEEFTREIASGELVALVGPSGCGKSTLLHMAAGLEKASSGTVS 60
           M L+F++V K FGDL V+E FT E  +GELVALVGPSGCGKSTLLH+AAGLEK + G+V 
Sbjct: 1   MNLTFDHVHKHFGDLPVVEGFTSEFKTGELVALVGPSGCGKSTLLHLAAGLEKPTQGSVL 60

Query: 61  ADGQAIRGPHPERTLMFQENALYPWLTLQQNVALALEFQNVDKKKSADQARVWLEKVKLK 120
           ADG+ + GPHP RTL+FQE+ALYPWLTL+ NVALALEFQNV KK++ + AR WL++V L 
Sbjct: 61  ADGKPVAGPHPSRTLVFQEHALYPWLTLEDNVALALEFQNVPKKRAREAARQWLDRVSLG 120

Query: 121 GFENYYPHQVSGGMRQRRA 139
           GFE+Y+PHQVSGGMRQR A
Sbjct: 121 GFEHYFPHQVSGGMRQRAA 139


>ref|YP_003979461.1| ABC transporter [Achromobacter xylosoxidans A8]
 gb|ADP16746.1| ABC transporter family protein 55 [Achromobacter xylosoxidans A8]
          Length = 256

 Score =  204 bits (519), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 96/139 (69%), Positives = 116/139 (83%)

Query: 1   MKLSFNNVAKRFGDLHVIEEFTREIASGELVALVGPSGCGKSTLLHMAAGLEKASSGTVS 60
           M L+F++V K FG+L V++ FT EI +GELVALVGPSGCGKSTLLH+AAGLEK + G+V 
Sbjct: 1   MNLTFDHVHKHFGELPVVDGFTSEIKAGELVALVGPSGCGKSTLLHLAAGLEKPTEGSVL 60

Query: 61  ADGQAIRGPHPERTLMFQENALYPWLTLQQNVALALEFQNVDKKKSADQARVWLEKVKLK 120
           ADG+A+ GPHP RTL+FQE+ALYPWLTL+ NVALALEFQN  K ++ + AR WL +V L 
Sbjct: 61  ADGKAVAGPHPSRTLVFQEHALYPWLTLEDNVALALEFQNTPKARAREAARQWLARVSLA 120

Query: 121 GFENYYPHQVSGGMRQRRA 139
           GFE+YYPHQVSGGMRQR A
Sbjct: 121 GFEHYYPHQVSGGMRQRAA 139