BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4181.p (333 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776712.1| ABC transporter periplasmic protein [Herbasp... 572 e-161 ref|YP_004415981.1| hypothetical protein PT7_0817 [Pusillimonas ... 487 e-136 ref|YP_004754196.1| hypothetical protein CFU_3549 [Collimonas fu... 478 e-133 ref|YP_004714091.1| hypothetical protein PSTAB_1721 [Pseudomonas... 455 e-126 ref|ZP_06688086.1| hypothetical protein HMPREF0004_3662 [Achromo... 451 e-125 >ref|YP_003776712.1| ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ64804.1| ABC-type transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 333 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 322/333 (96%), Positives = 327/333 (98%) Query: 1 MKLARILAPAITAAALAFSGNALALEKFKIGYLRVMDDAQAMAAYEAGLYKKYGLDVELI 60 MKLARILAPAITAAALAFSGNA ALEKFKIGYLRVMDDAQAMAAYEAGLYKKYGLDVELI Sbjct: 1 MKLARILAPAITAAALAFSGNAFALEKFKIGYLRVMDDAQAMAAYEAGLYKKYGLDVELI 60 Query: 61 EFKSGTDLVKAIVGGQLDSGVFGFSNAVAWASKGADLKVVGGAQLGYHALVAREDSGINK 120 EFKSGTDLVKAIVGGQLDSGVFGFSNAVAWASKGADLKVVGGAQLGYHALVAREDSGINK Sbjct: 61 EFKSGTDLVKAIVGGQLDSGVFGFSNAVAWASKGADLKVVGGAQLGYHALVAREDSGINK 120 Query: 121 VADLKGKTLASQAEGSTADTVLKGVVLRDAGVKPDDVNVMGVSPQVAVQSLVGKRVDAAF 180 VADLKGKTLASQAEGSTADTVLKGVVLRDAG+K DDVNVMGVSPQVAVQSLVGKRVDAAF Sbjct: 121 VADLKGKTLASQAEGSTADTVLKGVVLRDAGIKADDVNVMGVSPQVAVQSLVGKRVDAAF 180 Query: 181 LFEPQARIAQLIAPVKQVYEIGEVWPFPCMVVITSGETLKKKRDAVWKSLDAQRDAITLL 240 LFEPQARIAQLIAPVKQVYEIGEVWPFPCMVVITSGETLKKKR+AVWKSLDAQRDAITLL Sbjct: 181 LFEPQARIAQLIAPVKQVYEIGEVWPFPCMVVITSGETLKKKREAVWKSLDAQRDAITLL 240 Query: 241 QKKPAEASKLIAGYFIAEPTLKTLKHGEMLREDVIRDAIKSQTFTPKISKKDQDRMQEIA 300 QKKPAEASKLIAGYFIAEPTLKTLKHGEMLREDVIRDAIKSQTFTPKISKKDQDRMQEIA Sbjct: 241 QKKPAEASKLIAGYFIAEPTLKTLKHGEMLREDVIRDAIKSQTFTPKISKKDQDRMQEIA 300 Query: 301 DILQSQGSLKTKDGKPFEVRSIVDLAWQKDRKL 333 DILQSQGSLKT+DGKPF+V SI DL+WQ RKL Sbjct: 301 DILQSQGSLKTRDGKPFDVNSITDLSWQNARKL 333 >ref|YP_004415981.1| hypothetical protein PT7_0817 [Pusillimonas sp. T7-7] gb|AEC19357.1| hypothetical protein PT7_0817 [Pusillimonas sp. T7-7] Length = 331 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 249/333 (74%), Positives = 296/333 (88%), Gaps = 2/333 (0%) Query: 1 MKLARILAPAITAAALAFSGNALALEKFKIGYLRVMDDAQAMAAYEAGLYKKYGLDVELI 60 MKL+R+L P + AA A + ALA +KFKIGYLRVMDDAQA+AAYE G YKK+GLDVEL+ Sbjct: 1 MKLSRLLLPVL--AAFALASPALAADKFKIGYLRVMDDAQAIAAYEGGFYKKHGLDVELV 58 Query: 61 EFKSGTDLVKAIVGGQLDSGVFGFSNAVAWASKGADLKVVGGAQLGYHALVAREDSGINK 120 EFKSGTDL+KAIVGGQLD+GV GF+NA +W+SKGADLKVVGGAQ G+HA+V R+DSGI Sbjct: 59 EFKSGTDLIKAIVGGQLDTGVLGFTNAASWSSKGADLKVVGGAQHGFHAIVVRDDSGIKD 118 Query: 121 VADLKGKTLASQAEGSTADTVLKGVVLRDAGVKPDDVNVMGVSPQVAVQSLVGKRVDAAF 180 VA LKG TLASQ EGSTADTVLKGVVL++AG+KP+D+++MGVSPQVAVQSLVGKRVDAAF Sbjct: 119 VAGLKGHTLASQKEGSTADTVLKGVVLKEAGLKPEDLSIMGVSPQVAVQSLVGKRVDAAF 178 Query: 181 LFEPQARIAQLIAPVKQVYEIGEVWPFPCMVVITSGETLKKKRDAVWKSLDAQRDAITLL 240 LFEPQARIAQL+APV Q+YE+GEVWPFPCMVVI SG+T+K +++ VWKSLDAQR+AI LL Sbjct: 179 LFEPQARIAQLVAPVTQIYEVGEVWPFPCMVVIASGDTVKNRKEDVWKSLDAQREAIELL 238 Query: 241 QKKPAEASKLIAGYFIAEPTLKTLKHGEMLREDVIRDAIKSQTFTPKISKKDQDRMQEIA 300 KP E +KLIA YFIAEPTLKTLKHGE+ RED+IRDAIKSQTF+PK++ ++ DRMQEIA Sbjct: 239 TNKPEEGAKLIARYFIAEPTLKTLKHGEVPREDIIRDAIKSQTFSPKLTTQELDRMQEIA 298 Query: 301 DILQSQGSLKTKDGKPFEVRSIVDLAWQKDRKL 333 DI+Q+QGSLKT+DG+PF+V I+DL WQ+ RKL Sbjct: 299 DIMQAQGSLKTRDGQPFDVSQIIDLEWQEARKL 331 >ref|YP_004754196.1| hypothetical protein CFU_3549 [Collimonas fungivorans Ter331] gb|AEK63373.1| hypothetical protein CFU_3549 [Collimonas fungivorans Ter331] Length = 335 Score = 478 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 254/333 (76%), Positives = 290/333 (87%), Gaps = 2/333 (0%) Query: 1 MKLARILAPAITAAALAFSGNALALEKFKIGYLRVMDDAQAMAAYEAGLYKKYGLDVELI 60 +KL R+ + A L +G+A A EKFKIGYLRVMDDAQA+AA+E G YKK+GL+VEL+ Sbjct: 5 VKLKRLFI--LPALLLTLAGHAGAAEKFKIGYLRVMDDAQAIAAFEGGFYKKHGLEVELV 62 Query: 61 EFKSGTDLVKAIVGGQLDSGVFGFSNAVAWASKGADLKVVGGAQLGYHALVAREDSGINK 120 EFKSGTDL+KAIVGGQLDSGV GF+NA AWASKGADLKVV GAQ GYHA+V REDSGI Sbjct: 63 EFKSGTDLIKAIVGGQLDSGVLGFTNAAAWASKGADLKVVAGAQHGYHAIVVREDSGIKD 122 Query: 121 VADLKGKTLASQAEGSTADTVLKGVVLRDAGVKPDDVNVMGVSPQVAVQSLVGKRVDAAF 180 VA LKG TLASQAEGSTADTVLKGV L++AG+K DDVN++GVSPQVAVQSLVGKRVDAAF Sbjct: 123 VAGLKGHTLASQAEGSTADTVLKGVTLKNAGLKADDVNILGVSPQVAVQSLVGKRVDAAF 182 Query: 181 LFEPQARIAQLIAPVKQVYEIGEVWPFPCMVVITSGETLKKKRDAVWKSLDAQRDAITLL 240 LFEPQA IA+L+APVKQ+YE+GEVWPFPCMVVITSGETL K+RDAVWKSLDAQR+AI LL Sbjct: 183 LFEPQASIAKLVAPVKQIYEVGEVWPFPCMVVITSGETLAKRRDAVWKSLDAQREAIELL 242 Query: 241 QKKPAEASKLIAGYFIAEPTLKTLKHGEMLREDVIRDAIKSQTFTPKISKKDQDRMQEIA 300 QK PA ASKLIA YFIA+PTLKTLK GE+ RE VIRDAIKSQTF+ ++ K+ RMQE+A Sbjct: 243 QKDPAAASKLIASYFIADPTLKTLKQGELPRETVIRDAIKSQTFSAVLTAKELARMQELA 302 Query: 301 DILQSQGSLKTKDGKPFEVRSIVDLAWQKDRKL 333 +ILQ QGSLKT+DGKPF+V +I+DL WQK RKL Sbjct: 303 NILQDQGSLKTRDGKPFDVNAIIDLDWQKSRKL 335 >ref|YP_004714091.1| hypothetical protein PSTAB_1721 [Pseudomonas stutzeri ATCC 17588 = LMG 11199] gb|AEJ05002.1| hypothetical protein PSTAB_1721 [Pseudomonas stutzeri ATCC 17588 = LMG 11199] Length = 329 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 242/333 (72%), Positives = 282/333 (84%), Gaps = 4/333 (1%) Query: 1 MKLARILAPAITAAALAFSGNALALEKFKIGYLRVMDDAQAMAAYEAGLYKKYGLDVELI 60 MK L PA+ + S A A EKFK+GY+RVMDDAQAM A+EAGLYKK+GLDVELI Sbjct: 1 MKAKLWLVPAL----VLLSAFAQAQEKFKVGYIRVMDDAQAMVAHEAGLYKKHGLDVELI 56 Query: 61 EFKSGTDLVKAIVGGQLDSGVFGFSNAVAWASKGADLKVVGGAQLGYHALVAREDSGINK 120 EF SGTDL+KAIVGGQLD+GV GF+NAVAWASKGADLKVVGGAQ GYH+++ RED+ I Sbjct: 57 EFSSGTDLIKAIVGGQLDTGVLGFTNAVAWASKGADLKVVGGAQQGYHSILVREDTDIQD 116 Query: 121 VADLKGKTLASQAEGSTADTVLKGVVLRDAGVKPDDVNVMGVSPQVAVQSLVGKRVDAAF 180 VA LK +TLASQ EGSTAD VL+GV L++AG+KP DVN+MGVSP VAVQSLV RVDAAF Sbjct: 117 VAGLKDRTLASQREGSTADAVLRGVTLKNAGLKPSDVNIMGVSPAVAVQSLVSGRVDAAF 176 Query: 181 LFEPQARIAQLIAPVKQVYEIGEVWPFPCMVVITSGETLKKKRDAVWKSLDAQRDAITLL 240 LFEP RIAQL+APV+QVYEIGEVWPFPCMVVITSG+TL K++DAVWKSLDAQRDAI LL Sbjct: 177 LFEPYDRIAQLVAPVRQVYEIGEVWPFPCMVVITSGDTLAKRKDAVWKSLDAQRDAIELL 236 Query: 241 QKKPAEASKLIAGYFIAEPTLKTLKHGEMLREDVIRDAIKSQTFTPKISKKDQDRMQEIA 300 K+PAEA+KLIAGYFIAEPTLKTLK GE+ RE VI +AI +QTF+ K+ D R+QE+A Sbjct: 237 DKQPAEAAKLIAGYFIAEPTLKTLKRGELAREVVIEEAIGTQTFSAKLGDDDLARIQELA 296 Query: 301 DILQSQGSLKTKDGKPFEVRSIVDLAWQKDRKL 333 DILQ QGSLKT+DGKPF+ R+I+DL+WQ+ R+L Sbjct: 297 DILQEQGSLKTRDGKPFDTRAILDLSWQEAREL 329 >ref|ZP_06688086.1| hypothetical protein HMPREF0004_3662 [Achromobacter piechaudii ATCC 43553] gb|EFF74992.1| hypothetical protein HMPREF0004_3662 [Achromobacter piechaudii ATCC 43553] Length = 332 Score = 451 bits (1159), Expect = e-125, Method: Composition-based stats. Identities = 236/308 (76%), Positives = 267/308 (86%) Query: 26 EKFKIGYLRVMDDAQAMAAYEAGLYKKYGLDVELIEFKSGTDLVKAIVGGQLDSGVFGFS 85 EKF++GYLRVMDDAQA+ A E G YK GLD ELIEFKSGTDL+KAIVGGQLD GV GF+ Sbjct: 25 EKFRVGYLRVMDDAQAIVAQEGGFYKNAGLDSELIEFKSGTDLIKAIVGGQLDIGVLGFT 84 Query: 86 NAVAWASKGADLKVVGGAQLGYHALVAREDSGINKVADLKGKTLASQAEGSTADTVLKGV 145 NAVAWASKGADLKVVGGAQ GYH+L+ R+DSGI +A LKGKTLASQAEGSTAD VLKGV Sbjct: 85 NAVAWASKGADLKVVGGAQQGYHSLIVRDDSGIKDIAGLKGKTLASQAEGSTADVVLKGV 144 Query: 146 VLRDAGVKPDDVNVMGVSPQVAVQSLVGKRVDAAFLFEPQARIAQLIAPVKQVYEIGEVW 205 VL+ + DDVNVMGVSP VAVQSLVGKRVDAAFLFEP RIAQL+APVKQ+YE+G+ W Sbjct: 145 VLKQGNLSADDVNVMGVSPAVAVQSLVGKRVDAAFLFEPYDRIAQLVAPVKQIYEVGQAW 204 Query: 206 PFPCMVVITSGETLKKKRDAVWKSLDAQRDAITLLQKKPAEASKLIAGYFIAEPTLKTLK 265 PFPCMVVITSGETL K++D VWK+LDAQ AITLLQK+PA+ASKLIA YFIAEPTLKTL Sbjct: 205 PFPCMVVITSGETLAKRKDDVWKALDAQNQAITLLQKEPAQASKLIASYFIAEPTLKTLS 264 Query: 266 HGEMLREDVIRDAIKSQTFTPKISKKDQDRMQEIADILQSQGSLKTKDGKPFEVRSIVDL 325 GE+ RE VI +AI +Q FTPK++ KD RMQEIADILQ+QGSLKT+DGKP++V SIVDL Sbjct: 265 RGELPRETVIAEAISTQVFTPKLTPKDTARMQEIADILQAQGSLKTRDGKPYDVSSIVDL 324 Query: 326 AWQKDRKL 333 +WQ+ RKL Sbjct: 325 SWQEARKL 332