BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4176.p (614 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776709.1| Na+(K+)/H+ antiporter protein [Herbaspirillu... 955 0.0 ref|YP_001894063.1| Na+/H+ antiporter [Burkholderia phytofirmans... 487 e-135 ref|ZP_06843660.1| Na+/H+ antiporter [Burkholderia sp. Ch1-1] >g... 483 e-134 ref|YP_556758.1| CPA1 family Na(+)/H(+) antiporter [Burkholderia... 481 e-133 ref|ZP_03267989.1| Na+/H+ antiporter [Burkholderia sp. H160] >gi... 469 e-130 >ref|YP_003776709.1| Na+(K+)/H+ antiporter protein [Herbaspirillum seropedicae SmR1] gb|ADJ64801.1| Na+(K+)/H+ antiporter protein [Herbaspirillum seropedicae SmR1] Length = 560 Score = 955 bits (2468), Expect = 0.0, Method: Composition-based stats. Identities = 544/560 (97%), Positives = 555/560 (99%) Query: 55 MEIVFTVLILLLAVAVSGVVARLAPFKLPLPLFQIALGAVLAMPMFGLRISFDPELFLLL 114 MEIVFTVLILLLAVAVSGVVARLAPFKLPLPLFQIALGAVLA+PMFGLRISFDPELFLLL Sbjct: 1 MEIVFTVLILLLAVAVSGVVARLAPFKLPLPLFQIALGAVLALPMFGLRISFDPELFLLL 60 Query: 115 FIPPLLFTDGWRMPKREFFRLARPILALALGLVMFTVVGVGYFIHWMIPVISLPSAFALA 174 FIPPLLFTDGWRMPKREFFRLARPILALALGLVMFTVVGVGYFIHWMIPVISLPSAFALA Sbjct: 61 FIPPLLFTDGWRMPKREFFRLARPILALALGLVMFTVVGVGYFIHWMIPVISLPSAFALA 120 Query: 175 AVLSPTDAVAVSSIVGKGRLPASMQHVLEGEALMNDASGLVAFKFAIAAVITGTFSLLDA 234 AVLSPTDAVAVSSIVGKGRLPASMQHVLEGEALMNDASGLVAFKFAIAAVITGTFSLLDA Sbjct: 121 AVLSPTDAVAVSSIVGKGRLPASMQHVLEGEALMNDASGLVAFKFAIAAVITGTFSLLDA 180 Query: 235 SISFVLIAAGGIAVGLIVAWGFGLIRRKIIEWAGDEPGIQVVLLLLIPFTAYIFAEHFGL 294 SISFVLIAAGG+AVGLIVAWGFGLIRRKIIEWAGDEPGIQVVLLLLIPFTAYIFAEHFGL Sbjct: 181 SISFVLIAAGGVAVGLIVAWGFGLIRRKIIEWAGDEPGIQVVLLLLIPFTAYIFAEHFGL 240 Query: 295 SGILAAVAAGMLMPYLETAGGESAATRLQGRSIMTMLEFVFNGMSFLLLGLQLPGIVSLA 354 SGIL AVAAGMLMPYLETAGGESAATRLQGRSIMTMLEFVFNGMSFLLLGLQLPGIVSLA Sbjct: 241 SGILGAVAAGMLMPYLETAGGESAATRLQGRSIMTMLEFVFNGMSFLLLGLQLPGIVSLA 300 Query: 355 HVDAQMAGNVPVWHLFVYILAITVALIVLRFVWVWINLRMRRFASALRGQSGRNRKFDLR 414 H+DA+MAGNVPVWHLFVYI+AIT+AL+VLRFVWVWINLRMRRFASALRGQSGRNRKFDLR Sbjct: 301 HMDAKMAGNVPVWHLFVYIVAITLALVVLRFVWVWINLRMRRFASALRGQSGRNRKFDLR 360 Query: 415 LISITALSGVRGAITLAGVMSIPLLLKEHTPFPARDLLIFLATGVILCSLLFGSFLLPWM 474 LISITALSGVRGAITLAGVMSIPLLLKEHTPFPARDLLIFLATGVI+CSLL GS LLPWM Sbjct: 361 LISITALSGVRGAITLAGVMSIPLLLKEHTPFPARDLLIFLATGVIVCSLLLGSLLLPWM 420 Query: 475 LKDLQLDAEVKRRRAEEMMARLRLSEAAVRTIEEAQERIGVNLDESDLALLMEVSGSLLA 534 LKDLQLDAEVKRRRAEEMMARLRLSEAAVR+IE AQERIG+NLDE+DLALL EVSGSLLA Sbjct: 421 LKDLQLDAEVKRRRAEEMMARLRLSEAAVRSIETAQERIGMNLDENDLALLTEVSGSLLA 480 Query: 535 TYRMRMNAESDSEETQRAANRFKQFERELRLEAIRAERLEVHYLRAEQRINDETFLMLIN 594 TYRMRMNAESDSEETQRAANRFKQFERELRLEAIRAERLEVHYLRAEQRINDETFLMLIN Sbjct: 481 TYRMRMNAESDSEETQRAANRFKQFERELRLEAIRAERLEVHYLRAEQRINDETFLMLIN 540 Query: 595 QIDMAETWLLGSLNAPGQHH 614 QIDMAETWLLGSLNAPGQHH Sbjct: 541 QIDMAETWLLGSLNAPGQHH 560 >ref|YP_001894063.1| Na+/H+ antiporter [Burkholderia phytofirmans PsJN] gb|ACD14839.1| Na+/H+ antiporter [Burkholderia phytofirmans PsJN] Length = 551 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 289/551 (52%), Positives = 373/551 (67%), Gaps = 7/551 (1%) Query: 55 MEIVFTVLILLLAVAVSGVVARLAPFKLPLPLFQIALGAVLAMPMFGLRISFDPELFLLL 114 M+IVFTVLILLLAVA SGV+ R+ P LPLPL QIA+GA+LA P GL ++F+P++F++L Sbjct: 1 MDIVFTVLILLLAVAASGVLTRILPIALPLPLVQIAIGALLAWPRLGLHVTFNPDIFMML 60 Query: 115 FIPPLLFTDGWRMPKREFFRLARPILALALGLVMFTVVGVGYFIHWMIPVISLPSAFALA 174 FIPPLLF DGWR+PKREFF R IL LALGLV TV+ VGYF+H ++P ISLP AFALA Sbjct: 61 FIPPLLFADGWRIPKREFFMARRSILMLALGLVFMTVLVVGYFVHALVPSISLPVAFALA 120 Query: 175 AVLSPTDAVAVSSIVGKGRLPASMQHVLEGEALMNDASGLVAFKFAIAAVITGTFSLLDA 234 AVLSPTDAVA+S IVGKG++P + H+LEGEALMNDASGLVA KFAIAA +TG FSL DA Sbjct: 121 AVLSPTDAVALSGIVGKGKIPGRLMHILEGEALMNDASGLVALKFAIAAALTGVFSLRDA 180 Query: 235 SISFVLIAAGGIAVGLIVAWGFGLIRRKIIEWAGD-EPGIQVVLLLLIPFTAYIFAEHFG 293 SISFV+IA GG+AVG V+W FG + + + +P VV+ LLIPF AY+ AE F Sbjct: 181 SISFVIIAVGGLAVGAAVSWLFGYVSAHFLNLTEEGDPAPGVVMTLLIPFAAYLVAERFE 240 Query: 294 LSGILAAVAAGMLMPYLETAGGESAATRLQGRSIMTMLEFVFNGMSFLLLGLQLPGIVSL 353 LSGILAAVAAGM+M Y A++R++ S TM+EFVFNGM F+LLGLQ P I+ Sbjct: 241 LSGILAAVAAGMMMNYTTMVTAGPASSRVRASSTWTMIEFVFNGMVFILLGLQFPHILGR 300 Query: 354 AHVDAQMAGNVPVWHLFVYILAITVALIVLRFVWVWINLRMRRFASALRGQSG-RNRKFD 412 A +DA N VW L YI A+ AL +RFVWVW+ +R FAS + G N Sbjct: 301 ALLDAHETSNAQVWRLIGYIAAVAGALYAMRFVWVWL---LRYFASRSAAKQGVANAVPG 357 Query: 413 LRLISITALSGVRGAITLAGVMSIPLLLKEHTPFPARDLLIFLATGVILCSLLFGSFLLP 472 LR ++T ++GVRGA+TLAGV+S+P +L P RDL IF+A+GVIL SL+ LP Sbjct: 358 LRTAAVTTVAGVRGAVTLAGVLSLPEVLPGGAALPGRDLAIFIASGVILVSLIVAVVGLP 417 Query: 473 WMLKDLQLDAEVKRRRAEEMMARLRLSEAAVRTIEEAQERIGVNLDESDLALLMEVSGSL 532 +L + + AEE +AR ++AA+R ++E +R NLDES A +V+ + Sbjct: 418 LLLSGWRRGKD--PHAAEEALARTMAAQAAIRAVDEVHDRECSNLDESSSAYAADVTARV 475 Query: 533 LATYRMRMNAESDSEETQRAANRFKQFERELRLEAIRAERLEVHYLRAEQRINDETFLML 592 + YR R+ + E + A R E ++L A+RAER + LR+ Q INDET L Sbjct: 476 MDVYRRRLATLDEEREPRELARRADALEFRMKLAAMRAERKALLELRSSQAINDETLNKL 535 Query: 593 INQIDMAETWL 603 + ++D++ET L Sbjct: 536 MREVDLSETAL 546 >ref|ZP_06843660.1| Na+/H+ antiporter [Burkholderia sp. Ch1-1] gb|EFG68744.1| Na+/H+ antiporter [Burkholderia sp. Ch1-1] Length = 551 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 292/553 (52%), Positives = 376/553 (67%), Gaps = 11/553 (1%) Query: 55 MEIVFTVLILLLAVAVSGVVARLAPFKLPLPLFQIALGAVLAMPMFGLRISFDPELFLLL 114 M+IVFTVLILLLAVA SGVV R+ P LPLPL QIA+GA+LA P GL ++FDPE+F++L Sbjct: 1 MDIVFTVLILLLAVAASGVVTRILPIALPLPLVQIAIGALLAWPKLGLHVTFDPEIFMVL 60 Query: 115 FIPPLLFTDGWRMPKREFFRLARPILALALGLVMFTVVGVGYFIHWMIPVISLPSAFALA 174 FIPPLLF DGWR+PKREFF R IL LALGLV TV+ VGYF+H ++P ISLP AFALA Sbjct: 61 FIPPLLFADGWRIPKREFFMARRSILMLALGLVFVTVLVVGYFVHALVPSISLPVAFALA 120 Query: 175 AVLSPTDAVAVSSIVGKGRLPASMQHVLEGEALMNDASGLVAFKFAIAAVITGTFSLLDA 234 AVLSPTDAVA+S IVGKG++P + H+LEGEALMNDASGLVA KFAIAA +TG FSL DA Sbjct: 121 AVLSPTDAVALSGIVGKGKIPGRLMHILEGEALMNDASGLVALKFAIAAALTGVFSLRDA 180 Query: 235 SISFVLIAAGGIAVGLIVAWGFGLIRRKIIEWAGD-EPGIQVVLLLLIPFTAYIFAEHFG 293 SISFV+IA GG+A G V+W F + + + D +P VV+ LLIPF AY+ AE F Sbjct: 181 SISFVIIAVGGLATGAAVSWLFSFVSARFLNLTEDGDPAPGVVMTLLIPFAAYLIAERFE 240 Query: 294 LSGILAAVAAGMLMPYLETAGGESAATRLQGRSIMTMLEFVFNGMSFLLLGLQLPGIVSL 353 LSGILAAVAAGM M Y A ++R++ S TM+EFVFNGM F+LLGLQ P I+ Sbjct: 241 LSGILAAVAAGMTMNYATLANAGPVSSRVRANSTWTMIEFVFNGMVFILLGLQFPHILDR 300 Query: 354 AHVDAQMAGNVPVWHLFVYILAITVALIVLRFVWVWINLRMRRFASALRGQSGR---NRK 410 A +DA N V L YI A+ AL +RFVWVW+ +R FAS RG + R N Sbjct: 301 ALLDAHETSNAQVGLLIGYIAAVAAALYAMRFVWVWL---LRWFAS--RGATKRGMANAV 355 Query: 411 FDLRLISITALSGVRGAITLAGVMSIPLLLKEHTPFPARDLLIFLATGVILCSLLFGSFL 470 LR +++T ++GVRGA+TLAGV+S+P +L + P P RDL IF+A+GVIL SLL Sbjct: 356 PGLRTVAVTTVAGVRGAVTLAGVLSLPEVLPDGVPLPGRDLAIFIASGVILLSLLVAVVA 415 Query: 471 LPWMLKDLQLDAEVKRRRAEEMMARLRLSEAAVRTIEEAQERIGVNLDESDLALLMEVSG 530 LP +L + + AEE++AR ++AA+R ++E + +LDES A +V+ Sbjct: 416 LPLLLSGWRRVKD--PHAAEELLARTMAAQAAIRAVDEVHDTECADLDESASAYAADVTA 473 Query: 531 SLLATYRMRMNAESDSEETQRAANRFKQFERELRLEAIRAERLEVHYLRAEQRINDETFL 590 ++ YR R+ + +E + A R E ++L A+RAER + LR+ Q INDET Sbjct: 474 RVMDLYRRRLATLDEEQEPRELARRADALEFRMKLAAMRAERKTLLALRSSQAINDETLN 533 Query: 591 MLINQIDMAETWL 603 L+ ++D++ET L Sbjct: 534 KLMREVDLSETAL 546 >ref|YP_556758.1| CPA1 family Na(+)/H(+) antiporter [Burkholderia xenovorans LB400] gb|ABE28706.1| sodium/proton antiporter, CPA1 family [Burkholderia xenovorans LB400] Length = 551 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 287/550 (52%), Positives = 372/550 (67%), Gaps = 5/550 (0%) Query: 55 MEIVFTVLILLLAVAVSGVVARLAPFKLPLPLFQIALGAVLAMPMFGLRISFDPELFLLL 114 M+IVFTVLILLLAVA SGVV R+ P LPLPL QIA+GA+LA P GL ++FDPE+F++L Sbjct: 1 MDIVFTVLILLLAVAASGVVIRILPIALPLPLVQIAIGALLAWPKLGLHVTFDPEIFMML 60 Query: 115 FIPPLLFTDGWRMPKREFFRLARPILALALGLVMFTVVGVGYFIHWMIPVISLPSAFALA 174 FIPPLLF DGWR+PKREFF R IL LALGLV TV+ VGYF+H ++P ISLP AFALA Sbjct: 61 FIPPLLFADGWRIPKREFFMARRSILMLALGLVFVTVLVVGYFVHALVPSISLPVAFALA 120 Query: 175 AVLSPTDAVAVSSIVGKGRLPASMQHVLEGEALMNDASGLVAFKFAIAAVITGTFSLLDA 234 AVLSPTDAVA+S IVGKG++P + H+LEGEALMNDASGLVA KFAIAA +TG FSL DA Sbjct: 121 AVLSPTDAVALSGIVGKGKIPGRLMHILEGEALMNDASGLVALKFAIAAALTGVFSLRDA 180 Query: 235 SISFVLIAAGGIAVGLIVAWGFGLIRRKIIEWAGD-EPGIQVVLLLLIPFTAYIFAEHFG 293 SISFV+I+ GGIA G V+W F + + + D +P VV+ LLIPF AY+ AE F Sbjct: 181 SISFVIISVGGIATGAAVSWLFSFVSARFLNLTEDGDPAPGVVMTLLIPFAAYLIAERFE 240 Query: 294 LSGILAAVAAGMLMPYLETAGGESAATRLQGRSIMTMLEFVFNGMSFLLLGLQLPGIVSL 353 LSGILAAVAAGM M Y A ++R++ S TM+EFVFNGM F+LLGLQ P I+ Sbjct: 241 LSGILAAVAAGMTMNYATLANAGPVSSRVRANSTWTMIEFVFNGMVFILLGLQFPHILGR 300 Query: 354 AHVDAQMAGNVPVWHLFVYILAITVALIVLRFVWVWINLRMRRFASALRGQSGRNRKFDL 413 A +DA N V L YI A+ AL +RFVWVW+ + + RG + N L Sbjct: 301 ALLDAHETSNAQVGLLIGYIAAVAAALYAMRFVWVWLLRWVASRGATKRGMA--NAVPGL 358 Query: 414 RLISITALSGVRGAITLAGVMSIPLLLKEHTPFPARDLLIFLATGVILCSLLFGSFLLPW 473 R +++T ++GVRGA+TLAGV+S+P +L + P P RDL IF+A+GVIL SLL LP Sbjct: 359 RTVAVTTVAGVRGAVTLAGVLSLPEVLPDGVPLPGRDLAIFIASGVILLSLLVAVVALPL 418 Query: 474 MLKDLQLDAEVKRRRAEEMMARLRLSEAAVRTIEEAQERIGVNLDESDLALLMEVSGSLL 533 +L + + AEE++AR ++AA+R ++E + +LDES A +V+ ++ Sbjct: 419 LLSGWRRGKD--PHAAEELLARTLAAQAAIRAVDEVHDTECADLDESASAYAADVTARVM 476 Query: 534 ATYRMRMNAESDSEETQRAANRFKQFERELRLEAIRAERLEVHYLRAEQRINDETFLMLI 593 YR R+ + +E + A R E ++L A+RAER + LR+ Q INDET L+ Sbjct: 477 DLYRRRLATLDEEQEPRELARRADALEFRMKLAAMRAERKTLLALRSSQAINDETLNKLM 536 Query: 594 NQIDMAETWL 603 ++D++ET L Sbjct: 537 REVDLSETAL 546 >ref|ZP_03267989.1| Na+/H+ antiporter [Burkholderia sp. H160] gb|EEA00463.1| Na+/H+ antiporter [Burkholderia sp. H160] Length = 551 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 287/551 (52%), Positives = 375/551 (68%), Gaps = 7/551 (1%) Query: 55 MEIVFTVLILLLAVAVSGVVARLAPFKLPLPLFQIALGAVLAMPMFGLRISFDPELFLLL 114 MEIVFTVLILLLAVA SGV+ R PFKLPLPL QIA+GA+LA P L ++FDPE+F+LL Sbjct: 1 MEIVFTVLILLLAVAASGVLTRALPFKLPLPLVQIAIGALLAWPRLDLHVAFDPEIFMLL 60 Query: 115 FIPPLLFTDGWRMPKREFFRLARPILALALGLVMFTVVGVGYFIHWMIPVISLPSAFALA 174 FIPPLLF DGWR+PKREFF R IL LALGLV TV+ VGYF+H ++P ISLP AFALA Sbjct: 61 FIPPLLFADGWRIPKREFFMARRAILMLALGLVFMTVLVVGYFVHALVPQISLPVAFALA 120 Query: 175 AVLSPTDAVAVSSIVGKGRLPASMQHVLEGEALMNDASGLVAFKFAIAAVITGTFSLLDA 234 AVLSPTDAVA+S I GKG++P + H+LEGEALMNDASGLVA +FAIAA +TG FSL +A Sbjct: 121 AVLSPTDAVALSGIAGKGKIPGQLMHILEGEALMNDASGLVALRFAIAAALTGMFSLREA 180 Query: 235 SISFVLIAAGGIAVGLIVAWGFGLIRRKIIEWAGD-EPGIQVVLLLLIPFTAYIFAEHFG 293 S+SFV+IA GG+AVG V+ + + + + + +P VV+ LLIPF AY+ AE F Sbjct: 181 SVSFVIIAVGGLAVGAAVSAAVSFVSARFLSLSEEGDPAPGVVMTLLIPFAAYLTAERFE 240 Query: 294 LSGILAAVAAGMLMPYLETAGGESAATRLQGRSIMTMLEFVFNGMSFLLLGLQLPGIVSL 353 LSGILAAV+AGM+M Y A+R++ S TM+EFVFNGM F++LGLQ P I+ Sbjct: 241 LSGILAAVSAGMVMNYASNTNTWQVASRVRAVSTWTMIEFVFNGMVFIMLGLQFPRILGR 300 Query: 354 AHVDAQMAGNVPVWHLFVYILAITVALIVLRFVWVWINLRMRRFASALRGQSG-RNRKFD 412 A +DA + V L YI+A+ AL +RFVWVW+ +R FAS + G N Sbjct: 301 ALLDAHETSDAQVALLIGYIVAVATALYAMRFVWVWL---LRWFASRGAAKHGVANAVPG 357 Query: 413 LRLISITALSGVRGAITLAGVMSIPLLLKEHTPFPARDLLIFLATGVILCSLLFGSFLLP 472 LR++S+T ++GVRGA+TLAGV+S+P LL TP P RDL IF+A+GVIL SLL LP Sbjct: 358 LRMVSVTTVAGVRGAVTLAGVLSLPELLPNGTPLPGRDLAIFIASGVILLSLLVAVAALP 417 Query: 473 WMLKDLQLDAEVKRRRAEEMMARLRLSEAAVRTIEEAQERIGVNLDESDLALLMEVSGSL 532 +L+ + + AEE +AR +++A+R + ++ V+L+ES A +V+ + Sbjct: 418 LLLRGSRRGKD--PHAAEEALARTLAAQSAIRAVGHLRDSESVDLEESAQAYATDVTARV 475 Query: 533 LATYRMRMNAESDSEETQRAANRFKQFERELRLEAIRAERLEVHYLRAEQRINDETFLML 592 + YR R+ D + + A R E +RLEA+RAER + LR QRINDET L Sbjct: 476 MDLYRRRLATLDDEQAPRELARRADALEFRMRLEAMRAERKTLLDLRNSQRINDETLNKL 535 Query: 593 INQIDMAETWL 603 + ++D++ET L Sbjct: 536 MREVDLSETAL 546