BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4147.p         (167 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_03628786.1| protein of unknown function DUF1260 [bacteriu...    82   3e-14
ref|YP_927142.1| hypothetical protein Sama_1265 [Shewanella amaz...    58   4e-07
ref|ZP_08408056.1| hypothetical protein PH505_ad00110 [Pseudoalt...    57   8e-07
ref|ZP_01614133.1| putative orphan protein [Alteromonadales bact...    57   1e-06
ref|YP_340483.1| hypothetical protein PSHAa1984 [Pseudoalteromon...    55   2e-06

>ref|ZP_03628786.1| protein of unknown function DUF1260 [bacterium Ellin514]
 gb|EEF60898.1| protein of unknown function DUF1260 [bacterium Ellin514]
          Length = 129

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 1/95 (1%)

Query: 67  DARVIENLQRNGADLTKTHDIDFFLVFGQESDAVAAADNLRARGYEIASIGKVPKRTLWE 126
           D  VI  L++ G+DL+K H IDF+L F  ES A  AA  +R  GY +  + +  K   W 
Sbjct: 30  DETVIIQLRKAGSDLSKPHTIDFYLYFPSESAAEEAATRMRLTGYTV-EVKRAAKGDHWL 88

Query: 127 VHAKRKMAPEIGAMQAITRDLSALAASHHGYYDGW 161
               +++ PE+  +QAITRDL  LA S HG YDGW
Sbjct: 89  CLGTKQVIPELSTIQAITRDLDGLAKSLHGDYDGW 123


>ref|YP_927142.1| hypothetical protein Sama_1265 [Shewanella amazonensis SB2B]
 gb|ABL99472.1| protein of unknown function DUF1260 [Shewanella amazonensis SB2B]
          Length = 133

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 9/106 (8%)

Query: 64  EQQDARVIENLQRNGADLTKTHDIDFFLVFGQESDAVAAADNLRARGYEIASIGKV---- 119
           E  + ++++ +  +G DLTK  D+DFFLVF    DA +A ++L A+  E    G+V    
Sbjct: 5   EDDNGQMLKAMHESGIDLTKPLDVDFFLVFDDRRDAESALEDLTAQATE----GEVELNF 60

Query: 120 -PKRTLWEVHAKRKMAPEIGAMQAITRDLSALAASHHGYYDGWGTV 164
             +   WE+     M PE  A+ A   +L+  A    G  DGWG +
Sbjct: 61  NEELDKWELIVCINMLPEYDALVAKEIELNTFAGQFDGQSDGWGVM 106


>ref|ZP_08408056.1| hypothetical protein PH505_ad00110 [Pseudoalteromonas haloplanktis
           ANT/505]
 gb|EGI74718.1| hypothetical protein PH505_ad00110 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 111

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query: 64  EQQDARVIENLQRNGADLTKTHDIDFFLVFGQESDAVAAADNLRARGY-EIASIGKVPKR 122
           +  + +++  +   G DL K H +DFF++F QE+DA   A  + +    + A + K    
Sbjct: 5   DDDNGQLLAEIAAAGIDLNKMHQVDFFILFEQEADAEKFAKEIVSDALVQKAELEKCKDT 64

Query: 123 TLWEVHAKRKMAPEIGAMQAITRDLSALAASHHGYYDGWG 162
            +WEV  + +M PE   +    + + ++A S +GY DGWG
Sbjct: 65  GVWEVITQVQMVPEHTLLGQAEQYIESIANSFNGYGDGWG 104


>ref|ZP_01614133.1| putative orphan protein [Alteromonadales bacterium TW-7]
 gb|EAW26684.1| putative orphan protein [Alteromonadales bacterium TW-7]
          Length = 124

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 1/100 (1%)

Query: 64  EQQDARVIENLQRNGADLTKTHDIDFFLVFGQESDAVAAADNLRARGY-EIASIGKVPKR 122
           + ++ +++  +   G DL+K   IDFF++F Q++DA   A ++ +    + A + K    
Sbjct: 18  DDENGQLLAEIAAAGVDLSKMQQIDFFILFEQQADADKFAKDIVSDALVQTADVEKCKDT 77

Query: 123 TLWEVHAKRKMAPEIGAMQAITRDLSALAASHHGYYDGWG 162
            +WEV    +M PE   +    + L ++A  ++GY DGWG
Sbjct: 78  GVWEVITHVQMVPEHTLLGQAEQYLESIANGYNGYGDGWG 117


>ref|YP_340483.1| hypothetical protein PSHAa1984 [Pseudoalteromonas haloplanktis
           TAC125]
 emb|CAI87040.1| putative orphan protein [Pseudoalteromonas haloplanktis TAC125]
          Length = 111

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 64  EQQDARVIENLQRNGADLTKTHDIDFFLVFGQESDAVAAADNLRARGY-EIASIGKVPKR 122
           + ++ +++  +   G DL+K H +DF+++F Q+SDA   A  + A    + A + K    
Sbjct: 5   DDENGQLLAEIAAAGIDLSKMHQVDFYILFEQQSDAEKFAKEVVADTLVQHAELEKCQDT 64

Query: 123 TLWEVHAKRKMAPEIGAMQAITRDLSALAASHHGYYDGWG 162
            +WEV  + +M PE   +    + + ++A + +GY DGWG
Sbjct: 65  GVWEVITQVQMVPEHTLLGQAEQYIESIANNFNGYGDGWG 104