BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4133.p (253 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776704.1| 3-ketoacyl-CoA reductase [Herbaspirillum ser... 398 e-109 ref|YP_004154212.1| short-chain dehydrogenase/reductase sdr [Var... 313 1e-83 ref|YP_002943636.1| short-chain dehydrogenase/reductase SDR [Var... 309 2e-82 ref|YP_001526264.1| short-chain dehydrogenase [Azorhizobium caul... 260 2e-67 ref|YP_002542115.1| dehydrogenase/reductase protein [Agrobacteri... 259 3e-67 >ref|YP_003776704.1| 3-ketoacyl-CoA reductase [Herbaspirillum seropedicae SmR1] gb|ADJ64796.1| 3-ketoacyl-CoA reductase protein [Herbaspirillum seropedicae SmR1] Length = 253 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 242/253 (95%), Positives = 251/253 (99%) Query: 1 MLDLAGKVVFISGASTGIGAAAARAFAARGSHLVVHYNSSKEEAEAVAAEVRAAGSKAVT 60 MLDLAGKVVFISGASTGIGAAAARAFAARGSHLVVHYNSS++EAEAVAAEVRAAGSK++T Sbjct: 1 MLDLAGKVVFISGASTGIGAAAARAFAARGSHLVVHYNSSEKEAEAVAAEVRAAGSKSIT 60 Query: 61 IGADVRDTAAINAAITKAVEQMGRIDVLINNAGALVKRAPLETVTDELFDEIININARSV 120 IGADVRDT+AINAA+ KAV QMGRIDVLINNAGALVKRAPLETVTDELFD+IININARSV Sbjct: 61 IGADVRDTSAINAAVAKAVAQMGRIDVLINNAGALVKRAPLETVTDELFDDIININARSV 120 Query: 121 VAFTRAVIPVMRAQGGGNIINVTSVAARHGGGPGALIYAASKGFVSTITRGMAKELLADK 180 VAFTRAVIPVMRAQGGGNIINVTSVAARHGGGPGALIYAASKGFVST+TRGMAKELLADK Sbjct: 121 VAFTRAVIPVMRAQGGGNIINVTSVAARHGGGPGALIYAASKGFVSTLTRGMAKELLADK 180 Query: 181 IRVNAVAPGVIMTPFQERFTTPEQLEGFRKTIPMGRIGEPDECSGAFLYLASDQMSGYVT 240 IRVNAVAPGVIMTPFQERFTTPEQLEGFRKTIPMGRIGEPDECSGAFLYLAS+QMSGYVT Sbjct: 181 IRVNAVAPGVIMTPFQERFTTPEQLEGFRKTIPMGRIGEPDECSGAFLYLASEQMSGYVT 240 Query: 241 GQIIDVNGGQYMP 253 GQIIDVNGGQYMP Sbjct: 241 GQIIDVNGGQYMP 253 >ref|YP_004154212.1| short-chain dehydrogenase/reductase sdr [Variovorax paradoxus EPS] gb|ADU36101.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus EPS] Length = 253 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 172/253 (67%), Positives = 203/253 (80%) Query: 1 MLDLAGKVVFISGASTGIGAAAARAFAARGSHLVVHYNSSKEEAEAVAAEVRAAGSKAVT 60 M DL K ++GASTGIGAA A AFAARG + VHYNSS + A V +RAAG A T Sbjct: 1 MEDLKDKTALVTGASTGIGAAVAIAFAARGMRVAVHYNSSADAANQVVETIRAAGGTAFT 60 Query: 61 IGADVRDTAAINAAITKAVEQMGRIDVLINNAGALVKRAPLETVTDELFDEIININARSV 120 + ADVRDT AI A + ++ Q+GRIDVL+NNAG+LVKR P+ D LFDE+++INARSV Sbjct: 61 VKADVRDTGAIRACVKESAAQLGRIDVLVNNAGSLVKRVPIAEFDDALFDEVMHINARSV 120 Query: 121 VAFTRAVIPVMRAQGGGNIINVTSVAARHGGGPGALIYAASKGFVSTITRGMAKELLADK 180 +AF R V+P+MR QGGGNIINVTSVAAR GGGP A +YA SKGFVST T G+AKEL+ D+ Sbjct: 121 LAFCREVVPLMRTQGGGNIINVTSVAARTGGGPAAYLYAGSKGFVSTATHGLAKELVGDR 180 Query: 181 IRVNAVAPGVIMTPFQERFTTPEQLEGFRKTIPMGRIGEPDECSGAFLYLASDQMSGYVT 240 IRVNAVAPGVI TPFQ+RF+TP LE FR +IPMGRIGEP+EC GAFLYLAS+Q+SGYVT Sbjct: 181 IRVNAVAPGVIQTPFQDRFSTPAMLENFRASIPMGRIGEPEECVGAFLYLASEQLSGYVT 240 Query: 241 GQIIDVNGGQYMP 253 GQ+I+VNGGQYMP Sbjct: 241 GQVIEVNGGQYMP 253 >ref|YP_002943636.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110] gb|ACS18370.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110] Length = 253 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 169/253 (66%), Positives = 199/253 (78%) Query: 1 MLDLAGKVVFISGASTGIGAAAARAFAARGSHLVVHYNSSKEEAEAVAAEVRAAGSKAVT 60 M DL GK ++GASTGIGAA A AFAARG + VHYNSS + A V +R AG A T Sbjct: 1 MEDLKGKTALVTGASTGIGAAVAIAFAARGMRVAVHYNSSADAANQVVETIRQAGGDAFT 60 Query: 61 IGADVRDTAAINAAITKAVEQMGRIDVLINNAGALVKRAPLETVTDELFDEIININARSV 120 + ADVRDT AI + +A ++GRIDVL+NNAG+LVKR P+ D LFDE+++INARSV Sbjct: 61 LQADVRDTGAIRECVKQAASRLGRIDVLVNNAGSLVKRVPIAEFDDALFDEVMHINARSV 120 Query: 121 VAFTRAVIPVMRAQGGGNIINVTSVAARHGGGPGALIYAASKGFVSTITRGMAKELLADK 180 +AF R +P+MR GGGNIINVTSVAAR GGGPGA +YA SKGFVST T G+A+EL+ D+ Sbjct: 121 LAFAREAVPLMRTHGGGNIINVTSVAARTGGGPGAYLYAGSKGFVSTATHGLARELVGDR 180 Query: 181 IRVNAVAPGVIMTPFQERFTTPEQLEGFRKTIPMGRIGEPDECSGAFLYLASDQMSGYVT 240 IRVNAVAPGVI TPFQ+RF+TP LE FR IPMGRIG PDEC GAFLYLAS+Q+SGYVT Sbjct: 181 IRVNAVAPGVIQTPFQDRFSTPAMLESFRTAIPMGRIGSPDECVGAFLYLASEQLSGYVT 240 Query: 241 GQIIDVNGGQYMP 253 GQ+I+VNGGQYMP Sbjct: 241 GQVIEVNGGQYMP 253 >ref|YP_001526264.1| short-chain dehydrogenase [Azorhizobium caulinodans ORS 571] dbj|BAF89346.1| short-chain dehydrogenase [Azorhizobium caulinodans ORS 571] Length = 297 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 145/253 (57%), Positives = 184/253 (72%), Gaps = 2/253 (0%) Query: 3 DLAGKVVFISGASTGIGAAAARAFAARGSHLVVHYNSSKEEAEAVAAEVRAAGSKAVTIG 62 DLAGK V ++GASTGIGAA A FAA G+ + VHYN+S+E AE + ++AAGS+AV I Sbjct: 45 DLAGKSVLVTGASTGIGAAVAEGFAASGAKVAVHYNASREPAEQLVDRIQAAGSEAVLIQ 104 Query: 63 ADVRDTAAINAAITKAVEQMGRIDVLINNAGALVKRAPLETVTDELFDEIININARSVVA 122 DV + A + AV+ GR+DVL+NNAG LV+R P+ T E ++++N V+A Sbjct: 105 GDVTEPGAPARIVKAAVDAFGRLDVLVNNAGGLVERVPIPDYTPEFATRVLDLNVTQVIA 164 Query: 123 FTRAVIPVMRAQG--GGNIINVTSVAARHGGGPGALIYAASKGFVSTITRGMAKELLADK 180 F A + M Q GG+IINV+SVAAR+GGG GA++YAA+KGF+ST T G AKEL Sbjct: 165 FVTAAVQQMTGQPDPGGSIINVSSVAARNGGGNGAVLYAAAKGFISTATHGWAKELAKSG 224 Query: 181 IRVNAVAPGVIMTPFQERFTTPEQLEGFRKTIPMGRIGEPDECSGAFLYLASDQMSGYVT 240 IRVNAVAPGVI TPF ERF+TP+Q+ + TIPM RIG P+EC GAFL+LASD SGY+T Sbjct: 225 IRVNAVAPGVIATPFHERFSTPQQMAAMQATIPMDRIGIPEECVGAFLFLASDAASGYIT 284 Query: 241 GQIIDVNGGQYMP 253 GQI++VNGGQYMP Sbjct: 285 GQILEVNGGQYMP 297 >ref|YP_002542115.1| dehydrogenase/reductase protein [Agrobacterium radiobacter K84] gb|ACM30518.1| dehydrogenase/reductase protein [Agrobacterium radiobacter K84] Length = 264 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 144/251 (57%), Positives = 184/251 (73%), Gaps = 1/251 (0%) Query: 3 DLAGKVVFISGASTGIGAAAARAFAARGSHLVVHYNSSKEEAEAVAAEVRAAGSKAVTIG 62 DLAGK V I+GASTGIGAA ARAFA +G + +H+N+S+E AE +AAE+ AAG K + Sbjct: 15 DLAGKRVLITGASTGIGAALARAFAQQGMKVGIHFNASREPAEKLAAEITAAGGKVHLVQ 74 Query: 63 ADVRDTAAINAAITKAVEQMGRIDVLINNAGALVKRAPLETVTDELFDEIININARSVVA 122 DV + + E G +D LINNAG ++ R P +TD ++ ++N+NARSV+A Sbjct: 75 GDVSQDGETERVVNETAEAFGGLDGLINNAGGMLGRVPTSEMTDAHYERVMNLNARSVLA 134 Query: 123 FTRAVIPVMRAQGGGNIINVTSVAARHGGGPGALIYAASKGFVSTITRGMAKELLADKIR 182 TRA P ++ QGG IIN TS+AAR+GGG GA++YAASKGFVSTIT G AKE + DKIR Sbjct: 135 ATRAAHPHLKKQGG-FIINTTSIAARNGGGNGAILYAASKGFVSTITHGHAKEFVGDKIR 193 Query: 183 VNAVAPGVIMTPFQERFTTPEQLEGFRKTIPMGRIGEPDECSGAFLYLASDQMSGYVTGQ 242 VNAVAPGVI TPF ER+T EQ+E RKTIPMG +G ++C GA+L+LAS +SGY+TGQ Sbjct: 194 VNAVAPGVIATPFHERYTNDEQMELQRKTIPMGFVGTSEDCVGAYLFLASPTLSGYITGQ 253 Query: 243 IIDVNGGQYMP 253 +I+VNGGQ MP Sbjct: 254 VIEVNGGQLMP 264