BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4128.p (292 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_998699.1| ABC transporter-like protein [Verminephrobacter... 496 e-138 gb|EGH99061.1| ABC transporter related protein [Pseudomonas syri... 419 e-115 ref|ZP_04934501.1| hypothetical protein PA2G_01868 [Pseudomonas ... 407 e-112 ref|YP_001155775.1| nitrate ABC transporter, ATPase subunits C a... 399 e-109 ref|ZP_07044276.1| putative nitrate transport system ATP-binding... 391 e-107 >ref|YP_998699.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2] gb|ABM59681.1| ABC transporter related [Verminephrobacter eiseniae EF01-2] Length = 292 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 241/281 (85%), Positives = 255/281 (90%), Gaps = 3/281 (1%) Query: 9 MDHNFLSVQGLAKRYAAGAPPVFEQVSFGIDRGEFVCVIGHSGCGKTTILNVLAGLEAAS 68 M FL V L+KRY PPVF++VSFGID+GEF C+IGHSGCGKTTILNVLAGLEA+S Sbjct: 1 MGKAFLIVDNLSKRYTDDGPPVFDKVSFGIDKGEFACIIGHSGCGKTTILNVLAGLEASS 60 Query: 69 EGVVIMDQREVKGPSLDRGVVFQSHALMPWFSVLGNVVFAVRSRWPDWPRAKAEEHARRF 128 GVVIMDQREVKGPSLDRGVVFQSHALMPWFSVLGN+VFAVRSRWPDWPR KAEEHARRF Sbjct: 61 GGVVIMDQREVKGPSLDRGVVFQSHALMPWFSVLGNIVFAVRSRWPDWPRDKAEEHARRF 120 Query: 129 IEMVGLKGAEHKKPSELSGGMKQRVGIARAFSIEPKMLLMDEPFGALDALTRGVVQDELL 188 I MVGLKGAEHKKPSELSGGMKQRVGIARAFSIEPKMLLMDEPFGALDALTRGVVQDELL Sbjct: 121 IAMVGLKGAEHKKPSELSGGMKQRVGIARAFSIEPKMLLMDEPFGALDALTRGVVQDELL 180 Query: 189 KICAATHQTVFMITHDVDEAILLADKIFLMSNGPQACIAEVVINTLPKNRTREGMHHDPQ 248 KIC+ATHQTVFMITHDVDEAILLADKIFLMSNGP+A IAEVV+NT+PK RTRE MHHDPQ Sbjct: 181 KICSATHQTVFMITHDVDEAILLADKIFLMSNGPRARIAEVVVNTMPKTRTRENMHHDPQ 240 Query: 249 FYRIRNHLVDFLVHRSRQIQAAQASGAARLPTRIVMPGLEQ 289 FYRIRNHLVDFLVHRSRQIQ A A A R++MPGLE+ Sbjct: 241 FYRIRNHLVDFLVHRSRQIQEAGAGDAV---ARMIMPGLEE 278 >gb|EGH99061.1| ABC transporter related protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 304 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 200/289 (69%), Positives = 240/289 (83%), Gaps = 5/289 (1%) Query: 1 MSNEGSSSMDHNFLSVQGLAKRYAAGAPPVFEQVSFGIDRGEFVCVIGHSGCGKTTILNV 60 ++NE S++ F+ V+GL K+Y A PPVFE ++FGI +GEFVC+IGHSGCGK+TILNV Sbjct: 2 LNNESSNA---PFIKVEGLTKQYRADLPPVFENINFGIQKGEFVCIIGHSGCGKSTILNV 58 Query: 61 LAGLEAASEGVVIMDQREVKGPSLDRGVVFQSHALMPWFSVLGNVVFAVRSRWPDWPRAK 120 +AGLE A+ G V+M +E+ GPSLDRGVVFQSHAL+PW +V N+ FAVRSR PDW R + Sbjct: 59 IAGLEEATSGGVVMAGKEISGPSLDRGVVFQSHALLPWLTVEDNIAFAVRSRHPDWSRKQ 118 Query: 121 AEEHARRFIEMVGLKGAEHKKPSELSGGMKQRVGIARAFSIEPKMLLMDEPFGALDALTR 180 EH +F+++VGLK A KKPSELSGGMKQRVGIARAFS+EPKMLLMDEPFGALDALTR Sbjct: 119 VIEHGAKFLDLVGLKSAAKKKPSELSGGMKQRVGIARAFSVEPKMLLMDEPFGALDALTR 178 Query: 181 GVVQDELLKICAATHQTVFMITHDVDEAILLADKIFLMSNGPQACIAEVVINTLPKNRTR 240 GV+QDELLKICAAT QTVFMITHDVDE+ILLADKI LMSNGP A +AE+VINT+P++R+R Sbjct: 179 GVIQDELLKICAATKQTVFMITHDVDESILLADKIMLMSNGPHARVAEIVINTIPRDRSR 238 Query: 241 EGMHHDPQFYRIRNHLVDFLVHRSRQIQAAQASGAARLPTRIVMPGLEQ 289 E +HHDPQFYR+RNHLVDFLV RS++IQ Q+ A IV PGLE+ Sbjct: 239 ETIHHDPQFYRLRNHLVDFLVRRSKEIQ--QSGSAQNSEPLIVRPGLEE 285 >ref|ZP_04934501.1| hypothetical protein PA2G_01868 [Pseudomonas aeruginosa 2192] gb|EAZ58620.1| hypothetical protein PA2G_01868 [Pseudomonas aeruginosa 2192] Length = 301 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 199/275 (72%), Positives = 224/275 (81%), Gaps = 1/275 (0%) Query: 13 FLSVQGLAKRYAAGAPPVFEQVSFGIDRGEFVCVIGHSGCGKTTILNVLAGLEAASEGVV 72 FL V+GL+KRY PPVFE ++F +++GEFVCVIGHSGCGK+TILNVLAGLE S G V Sbjct: 6 FLKVEGLSKRYQPSQPPVFENINFSLEQGEFVCVIGHSGCGKSTILNVLAGLEEPSSGGV 65 Query: 73 IMDQREVKGPSLDRGVVFQSHALMPWFSVLGNVVFAVRSRWPDWPRAKAEEHARRFIEMV 132 +M +E+ GPSLDRGVVFQ HALMPW +V N+ FAV+SR P W R + EH RFIEMV Sbjct: 66 VMAGKEIAGPSLDRGVVFQGHALMPWLTVEQNIAFAVKSRHPSWSRQQIAEHGARFIEMV 125 Query: 133 GLKGAEHKKPSELSGGMKQRVGIARAFSIEPKMLLMDEPFGALDALTRGVVQDELLKICA 192 GL GA KKP+ELSGGMKQRVGIARAF++EPKMLLMDEPFGALDALTRGV+QDEL+KICA Sbjct: 126 GLTGAAQKKPAELSGGMKQRVGIARAFAVEPKMLLMDEPFGALDALTRGVIQDELVKICA 185 Query: 193 ATHQTVFMITHDVDEAILLADKIFLMSNGPQACIAEVVINTLPKNRTREGMHHDPQFYRI 252 AT QTVFMITHDVDEAILLADK+ LMSNGP A IAE+VINTLP+ RTRE +HHDPQFYRI Sbjct: 186 ATRQTVFMITHDVDEAILLADKVMLMSNGPNARIAEIVINTLPRERTRETIHHDPQFYRI 245 Query: 253 RNHLVDFLVHRSRQIQAAQASGAARLPTRIVMPGL 287 RNHLVDFLV RS+ IQ P IV PGL Sbjct: 246 RNHLVDFLVRRSKTIQQGVEGVLGDQPL-IVRPGL 279 >ref|YP_001155775.1| nitrate ABC transporter, ATPase subunits C and D [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gb|ABP34211.1| nitrate ABC transporter, ATPase subunits C and D [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 287 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 188/285 (65%), Positives = 229/285 (80%), Gaps = 1/285 (0%) Query: 9 MDHNFLSVQGLAKRYAAGAPPVFEQVSFGIDRGEFVCVIGHSGCGKTTILNVLAGLEAAS 68 +++ FL V L+K Y A APPVFE + F I++GEFVC+IGHSGCGKTTILNVLAGLE A+ Sbjct: 3 IENTFLKVSNLSKSYKADAPPVFEGIDFEIEKGEFVCIIGHSGCGKTTILNVLAGLEEAT 62 Query: 69 EGVVIMDQREVKGPSLDRGVVFQSHALMPWFSVLGNVVFAVRSRWPDWPRAKAEEHARRF 128 G IM + ++GP L+RGVVFQ HALMPW +VL NV FAV+S++PDW + + EH++++ Sbjct: 63 GGNAIMLGKRIQGPGLERGVVFQGHALMPWMTVLQNVAFAVKSKYPDWSKEQITEHSKKY 122 Query: 129 IEMVGLKGAEHKKPSELSGGMKQRVGIARAFSIEPKMLLMDEPFGALDALTRGVVQDELL 188 + MVGL AE+KKPSELSGGMKQRVGIARAF+IEPKMLL+DEPFGALDALTRGV+QDELL Sbjct: 123 LAMVGLVNAENKKPSELSGGMKQRVGIARAFAIEPKMLLLDEPFGALDALTRGVIQDELL 182 Query: 189 KICAATHQTVFMITHDVDEAILLADKIFLMSNGPQACIAEVVINTLPKNRTREGMHHDPQ 248 KIC T+QTVFMITHDVDEAILL+DKI LMSNGP A IAE+V+NTLPK R R +HHD Sbjct: 183 KICKETNQTVFMITHDVDEAILLSDKIMLMSNGPNARIAEIVVNTLPKGRKRANLHHDAM 242 Query: 249 FYRIRNHLVDFLVHRSRQIQAAQASGAAR-LPTRIVMPGLEQVAA 292 +Y +RNHLVDFLV+RS+ +Q A G IV+PG++ V A Sbjct: 243 YYPMRNHLVDFLVNRSKDLQVKGAKGELDGYKPVIVLPGVDAVVA 287 >ref|ZP_07044276.1| putative nitrate transport system ATP-binding protein [Comamonas testosteroni S44] gb|EFI62026.1| putative nitrate transport system ATP-binding protein [Comamonas testosteroni S44] Length = 306 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 185/287 (64%), Positives = 225/287 (78%), Gaps = 4/287 (1%) Query: 1 MSNEGSSSMDHNFLSVQGLAKRYAAGAPPVFEQVSFGIDRGEFVCVIGHSGCGKTTILNV 60 ++N+ S FL V+GL K Y G PV + V F +++GEF CVIGHSGCGKTTILNV Sbjct: 2 LTNDVDISGAKPFLKVEGLTKSYVPGGDPVLDGVHFELNQGEFACVIGHSGCGKTTILNV 61 Query: 61 LAGLEAASEGVVIMDQREVKGPSLDRGVVFQSHALMPWFSVLGNVVFAVRSRWPDWPRAK 120 LAGLE+A++G VIM RE+ GPSLDRGVVFQ HALMPW +V N+ FAVRS+WP+W +A+ Sbjct: 62 LAGLESATDGTVIMSGREISGPSLDRGVVFQGHALMPWLTVRNNIAFAVRSKWPEWSKAQ 121 Query: 121 AEEHARRFIEMVGLKGAEHKKPSELSGGMKQRVGIARAFSIEPKMLLMDEPFGALDALTR 180 EH +++E+VGL A KKPS LSGGMKQRVGIARAF+I+PKMLL+DEPFGALDALTR Sbjct: 122 VNEHVEKYVELVGLNHAIDKKPSALSGGMKQRVGIARAFAIQPKMLLLDEPFGALDALTR 181 Query: 181 GVVQDELLKICAATHQTVFMITHDVDEAILLADKIFLMSNGPQACIAEVVINTLPKNRTR 240 G +QDELL+IC T QTVFMITHDVDE+ILLADKI LMSNGP+A +AEVV+NT+P +R R Sbjct: 182 GTIQDELLRICRETRQTVFMITHDVDESILLADKILLMSNGPRARVAEVVLNTMPADRQR 241 Query: 241 EGMHHDPQFYRIRNHLVDFLVHRSRQIQAAQASGAARLPTRIVMPGL 287 +HHDPQ+Y IRNHLVDFLV RS+ + ++G A + V PGL Sbjct: 242 ATLHHDPQYYSIRNHLVDFLVARSKDL----SNGRAPIKPPYVSPGL 284