BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4123.p         (76 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004754040.1| hypothetical protein CFU_3393 [Collimonas fu...   102   3e-20

>ref|YP_004754040.1| hypothetical protein CFU_3393 [Collimonas fungivorans Ter331]
 gb|AEK63217.1| hypothetical protein CFU_3393 [Collimonas fungivorans Ter331]
          Length = 74

 Score =  102 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/74 (62%), Positives = 61/74 (82%), Gaps = 1/74 (1%)

Query: 1  MTHFDLASDARFAVASSTPSSLAIRLGRREIFICRDTYVRRYRVNPVIECSAGIEPGHVE 60
          MT+ D+ S +RF +  STPSS+ +R G+RE+FICRD Y R YR NP++EC+AGI+ GH+E
Sbjct: 1  MTNLDITSGSRFGM-ESTPSSILMRFGKRELFICRDFYKRLYRSNPILECNAGIQAGHLE 59

Query: 61 ILLFRRWLVVLSKA 74
          ILLFR+WLVV+SKA
Sbjct: 60 ILLFRKWLVVMSKA 73