BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4113.p (168 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777717.1| hypothetical protein Hsero_4341 [Herbaspiril... 314 2e-84 ref|YP_004754794.1| hypothetical protein CFU_4149 [Collimonas fu... 253 9e-66 ref|YP_368991.1| hypothetical protein Bcep18194_A4752 [Burkholde... 249 1e-64 ref|YP_001857457.1| hypothetical protein Bphy_1228 [Burkholderia... 248 3e-64 ref|YP_773403.1| hypothetical protein Bamb_1511 [Burkholderia am... 247 4e-64 >ref|YP_003777717.1| hypothetical protein Hsero_4341 [Herbaspirillum seropedicae SmR1] gb|ADJ65809.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 422 Score = 314 bits (805), Expect = 2e-84, Method: Composition-based stats. Identities = 158/167 (94%), Positives = 161/167 (96%) Query: 1 MHYFFEDLELPRLVETNLLQVPNWKNQRAGYSVDGSPNNIDVVRSLRSSLGRRIALGGPL 60 MHYFFEDLELPRLVETNLLQVPNWKNQRAGYSVDGSPNNIDVVRSLRSSLGRRIALGGPL Sbjct: 124 MHYFFEDLELPRLVETNLLQVPNWKNQRAGYSVDGSPNNIDVVRSLRSSLGRRIALGGPL 183 Query: 61 QRQLDVAEETLAEMKRKPEEHSADIPLLEEEVKHLRARILRIPFIDPFDLRYVNRVRQPQ 120 QRQLD AEE L EMKRKP+EH ADI LLEEE++ LRARILRIPFIDPFDLRYVNRVRQPQ Sbjct: 184 QRQLDAAEEALTEMKRKPDEHRADIKLLEEEIRQLRARILRIPFIDPFDLRYVNRVRQPQ 243 Query: 121 PSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLTRNYEHIEVVF 167 PSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLTRNYEHIEVVF Sbjct: 244 PSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLTRNYEHIEVVF 290 >ref|YP_004754794.1| hypothetical protein CFU_4149 [Collimonas fungivorans Ter331] gb|AEK63971.1| protein of unknown function DUF444 [Collimonas fungivorans Ter331] Length = 421 Score = 253 bits (645), Expect = 9e-66, Method: Composition-based stats. Identities = 127/167 (76%), Positives = 142/167 (85%) Query: 1 MHYFFEDLELPRLVETNLLQVPNWKNQRAGYSVDGSPNNIDVVRSLRSSLGRRIALGGPL 60 M YFFEDLELPRL++TNLL VP+WKN RAGYS DGSPNNID+VRSLRSSLGRRIALG PL Sbjct: 123 MQYFFEDLELPRLIKTNLLAVPSWKNMRAGYSTDGSPNNIDIVRSLRSSLGRRIALGSPL 182 Query: 61 QRQLDVAEETLAEMKRKPEEHSADIPLLEEEVKHLRARILRIPFIDPFDLRYVNRVRQPQ 120 +L E + +K P++ +I LE+++ HL+ RI RIPFIDPFDLRYVNRV+ PQ Sbjct: 183 VVRLRELELLMETLKADPQDRREEIKRLEDDIHHLKGRIWRIPFIDPFDLRYVNRVKVPQ 242 Query: 121 PSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLTRNYEHIEVVF 167 PSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLTRNYEHIEVVF Sbjct: 243 PSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLTRNYEHIEVVF 289 >ref|YP_368991.1| hypothetical protein Bcep18194_A4752 [Burkholderia sp. 383] gb|ABB08347.1| protein of unknown function DUF444 [Burkholderia sp. 383] Length = 422 Score = 249 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 124/167 (74%), Positives = 142/167 (85%) Query: 1 MHYFFEDLELPRLVETNLLQVPNWKNQRAGYSVDGSPNNIDVVRSLRSSLGRRIALGGPL 60 M YFF+DLELPRLV+T+LL VP+WKN RAG+S +G+PNNIDVVRSLRS+LGRRIALG PL Sbjct: 123 MQYFFDDLELPRLVKTHLLTVPSWKNVRAGWSAEGTPNNIDVVRSLRSALGRRIALGSPL 182 Query: 61 QRQLDVAEETLAEMKRKPEEHSADIPLLEEEVKHLRARILRIPFIDPFDLRYVNRVRQPQ 120 +L E L MK PE+ A+I +LE E+ HL+ RI RIPFIDPFDLRY+NRV+QPQ Sbjct: 183 VNELRELEAQLEAMKSDPEDRRAEIAVLEAEIHHLKGRIWRIPFIDPFDLRYINRVKQPQ 242 Query: 121 PSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLTRNYEHIEVVF 167 PSS+AVMFC+MDVSGSMDEQRKDLSKRFFILLYLFL RNYE IEVVF Sbjct: 243 PSSQAVMFCLMDVSGSMDEQRKDLSKRFFILLYLFLKRNYERIEVVF 289 >ref|YP_001857457.1| hypothetical protein Bphy_1228 [Burkholderia phymatum STM815] gb|ACC70411.1| protein of unknown function DUF444 [Burkholderia phymatum STM815] Length = 423 Score = 248 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 123/167 (73%), Positives = 142/167 (85%) Query: 1 MHYFFEDLELPRLVETNLLQVPNWKNQRAGYSVDGSPNNIDVVRSLRSSLGRRIALGGPL 60 M YFF+DLELPRLV+T+LL VP WK+ RAG++ +G+PNNIDVVRSLRS+LGRRIALG PL Sbjct: 124 MQYFFDDLELPRLVKTHLLAVPTWKSIRAGWAAEGTPNNIDVVRSLRSALGRRIALGAPL 183 Query: 61 QRQLDVAEETLAEMKRKPEEHSADIPLLEEEVKHLRARILRIPFIDPFDLRYVNRVRQPQ 120 +L E+ L EMK P + +I LLEE++ HLR RI RIPFIDPFDLRYVNRV+QPQ Sbjct: 184 VNELHELEKQLEEMKADPADRRDEIKLLEEDIHHLRGRIWRIPFIDPFDLRYVNRVKQPQ 243 Query: 121 PSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLTRNYEHIEVVF 167 PSS+AVMFC+MDVSGSMDEQRKDL+KRFFILLYLFL RNYE IEVVF Sbjct: 244 PSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYEKIEVVF 290 >ref|YP_773403.1| hypothetical protein Bamb_1511 [Burkholderia ambifaria AMMD] gb|ABI87069.1| protein of unknown function DUF444 [Burkholderia ambifaria AMMD] Length = 422 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 124/167 (74%), Positives = 141/167 (84%) Query: 1 MHYFFEDLELPRLVETNLLQVPNWKNQRAGYSVDGSPNNIDVVRSLRSSLGRRIALGGPL 60 M YFF+DLELPRLV+T+LL VP+WKN RAG+S +G+PNNIDVVRSLRS+LGRRIALG PL Sbjct: 123 MQYFFDDLELPRLVKTHLLTVPSWKNVRAGWSAEGTPNNIDVVRSLRSALGRRIALGSPL 182 Query: 61 QRQLDVAEETLAEMKRKPEEHSADIPLLEEEVKHLRARILRIPFIDPFDLRYVNRVRQPQ 120 +L E L MK PE+ ADI LE E+ HL+ RI RIPFIDPFDLRY+NRV+QPQ Sbjct: 183 VNELRELEAQLEVMKLDPEDRRADIATLEAEIHHLKGRIWRIPFIDPFDLRYINRVKQPQ 242 Query: 121 PSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLTRNYEHIEVVF 167 PSS+AVMFC+MDVSGSMDEQRKDL+KRFFILLYLFL RNYE IEVVF Sbjct: 243 PSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVF 289