BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4102.p (213 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776695.1| TRP repressor binding protein [Herbaspirillu... 361 3e-98 ref|YP_001353870.1| trp repressor binding protein [Janthinobacte... 309 2e-82 ref|YP_004753565.1| tryptophan repressor binding protein [Collim... 294 7e-78 ref|ZP_03696712.1| flavoprotein WrbA [Lutiella nitroferrum 2002]... 284 7e-75 ref|ZP_08272947.1| tryptophan repressor binding protein [Oxaloba... 278 4e-73 >ref|YP_003776695.1| TRP repressor binding protein [Herbaspirillum seropedicae SmR1] gb|ADJ64787.1| TRP repressor binding protein [Herbaspirillum seropedicae SmR1] Length = 214 Score = 361 bits (927), Expect = 3e-98, Method: Composition-based stats. Identities = 196/214 (91%), Positives = 205/214 (95%), Gaps = 1/214 (0%) Query: 1 MMTSSTA-TSVQTSSNATILVLYYSRHGATRKLAELIAQGVESVPGCDARLRTVPAVSTV 59 M TS+T+ T+V +SNATILVLYYSRHGATRKLAELIAQGVESVPGCDARLRTVPAVSTV Sbjct: 1 MTTSATSSTAVNAASNATILVLYYSRHGATRKLAELIAQGVESVPGCDARLRTVPAVSTV 60 Query: 60 TEAVEPDVPSSGAPYVEASDLAECDGLALGSPTRFGNMAAAMKYFWDGTSPQWLSGTLAG 119 EAVEPDVP+SGAPYVEASDL ECDGLALGSPTRFGNMAAAMKYFWDGT+PQWLSG L G Sbjct: 61 AEAVEPDVPASGAPYVEASDLEECDGLALGSPTRFGNMAAAMKYFWDGTAPQWLSGALTG 120 Query: 120 KPACVFTSTGSLHGGQESTLLSMMLPLLHHGMLIVGLPYSHPELMNTSSGGTPYGASHWA 179 KPACVFTSTGSLHGGQE+TLLSMM+PLLHHGML+VGLPYSHPELMNT SGGTPYGASHWA Sbjct: 121 KPACVFTSTGSLHGGQEATLLSMMIPLLHHGMLLVGLPYSHPELMNTHSGGTPYGASHWA 180 Query: 180 GVNGNQPLSDDSRTLAIALGKRLAENAIKLRRPS 213 GVNGNQPLSDDSRTLAIALGKRLAENAIKLRRPS Sbjct: 181 GVNGNQPLSDDSRTLAIALGKRLAENAIKLRRPS 214 >ref|YP_001353870.1| trp repressor binding protein [Janthinobacterium sp. Marseille] gb|ABR89342.1| trp repressor binding protein [Janthinobacterium sp. Marseille] Length = 202 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 159/193 (82%), Positives = 176/193 (91%) Query: 18 ILVLYYSRHGATRKLAELIAQGVESVPGCDARLRTVPAVSTVTEAVEPDVPSSGAPYVEA 77 ILVLYYSRHG+TRKLAELI QG++SVPGC+ARLRTVPAVSTV EA EP+VP+ GAPYVE Sbjct: 8 ILVLYYSRHGSTRKLAELIGQGIDSVPGCEARLRTVPAVSTVIEATEPEVPNEGAPYVEL 67 Query: 78 SDLAECDGLALGSPTRFGNMAAAMKYFWDGTSPQWLSGTLAGKPACVFTSTGSLHGGQES 137 DL EC GLALGSPTRFGNMA+AMKYFWDGTS QWLSG L GKPACVFTSTGSLHGGQES Sbjct: 68 QDLEECAGLALGSPTRFGNMASAMKYFWDGTSAQWLSGALNGKPACVFTSTGSLHGGQES 127 Query: 138 TLLSMMLPLLHHGMLIVGLPYSHPELMNTSSGGTPYGASHWAGVNGNQPLSDDSRTLAIA 197 TLLSMMLPLLHHGML++GLPY+ PELM TSSGGTPYGASHW+GV+GNQP+S D+R LAIA Sbjct: 128 TLLSMMLPLLHHGMLVLGLPYTQPELMTTSSGGTPYGASHWSGVSGNQPISADTRALAIA 187 Query: 198 LGKRLAENAIKLR 210 LG+RLA+ +KLR Sbjct: 188 LGQRLAQTTVKLR 200 >ref|YP_004753565.1| tryptophan repressor binding protein [Collimonas fungivorans Ter331] gb|AEK62742.1| tryptophan repressor binding protein [Collimonas fungivorans Ter331] Length = 204 Score = 294 bits (752), Expect = 7e-78, Method: Composition-based stats. Identities = 153/201 (76%), Positives = 176/201 (87%) Query: 9 SVQTSSNATILVLYYSRHGATRKLAELIAQGVESVPGCDARLRTVPAVSTVTEAVEPDVP 68 + + N +LVLYYSRHG+TRKLAELI QG++SV GC+ARLRTVPAVSTV EA PD+P Sbjct: 2 TANITVNTPLLVLYYSRHGSTRKLAELIGQGIDSVAGCEARLRTVPAVSTVIEASAPDIP 61 Query: 69 SSGAPYVEASDLAECDGLALGSPTRFGNMAAAMKYFWDGTSPQWLSGTLAGKPACVFTST 128 + GAPYVE +DL EC GLALGSPTRFGNMAAAMKYFWDGTS WL+GTLAGKPACVFTST Sbjct: 62 AEGAPYVELADLQECCGLALGSPTRFGNMAAAMKYFWDGTSTDWLAGTLAGKPACVFTST 121 Query: 129 GSLHGGQESTLLSMMLPLLHHGMLIVGLPYSHPELMNTSSGGTPYGASHWAGVNGNQPLS 188 GSLHGGQESTL+SMM PLLHHGML++GLPY+ PELM T+SGG+PYGASHW+G+NG P+S Sbjct: 122 GSLHGGQESTLMSMMTPLLHHGMLVMGLPYTLPELMTTASGGSPYGASHWSGMNGTHPIS 181 Query: 189 DDSRTLAIALGKRLAENAIKL 209 +SRTLAIA G+RLAE A+KL Sbjct: 182 AESRTLAIAQGRRLAETALKL 202 >ref|ZP_03696712.1| flavoprotein WrbA [Lutiella nitroferrum 2002] gb|EEG10232.1| flavoprotein WrbA [Lutiella nitroferrum 2002] Length = 200 Score = 284 bits (726), Expect = 7e-75, Method: Composition-based stats. Identities = 145/192 (75%), Positives = 167/192 (86%) Query: 18 ILVLYYSRHGATRKLAELIAQGVESVPGCDARLRTVPAVSTVTEAVEPDVPSSGAPYVEA 77 ILVLYYS+HGATR+LA LIA+G+ESVPGC ARLRTVP VSTV EA EP VP +GAPYVE Sbjct: 4 ILVLYYSQHGATRELARLIARGIESVPGCQARLRTVPKVSTVCEATEPAVPEAGAPYVER 63 Query: 78 SDLAECDGLALGSPTRFGNMAAAMKYFWDGTSPQWLSGTLAGKPACVFTSTGSLHGGQES 137 DLAEC GLALGSPTRFGNMAAA+KYF DGTS +W++GTLAGKPAC+FT++ SLHGGQES Sbjct: 64 RDLAECIGLALGSPTRFGNMAAALKYFLDGTSAEWMAGTLAGKPACLFTTSASLHGGQES 123 Query: 138 TLLSMMLPLLHHGMLIVGLPYSHPELMNTSSGGTPYGASHWAGVNGNQPLSDDSRTLAIA 197 TLLSMMLPL+HHGMLI+GLP++ P L T SGGTPYG SH AG+N ++ +SDD +TLAIA Sbjct: 124 TLLSMMLPLMHHGMLILGLPFTEPALSTTQSGGTPYGVSHVAGLNNDRRISDDEKTLAIA 183 Query: 198 LGKRLAENAIKL 209 GKRLAE A+KL Sbjct: 184 QGKRLAEAALKL 195 >ref|ZP_08272947.1| tryptophan repressor binding protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33569.1| tryptophan repressor binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 181 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 140/179 (78%), Positives = 160/179 (89%) Query: 32 LAELIAQGVESVPGCDARLRTVPAVSTVTEAVEPDVPSSGAPYVEASDLAECDGLALGSP 91 +AEL+AQG+ESV GCDA LRTVPA+STVTEA EP++P+ GAPYVE DL +C GLA GSP Sbjct: 1 MAELLAQGIESVAGCDALLRTVPAISTVTEATEPEIPTQGAPYVELQDLTDCAGLAFGSP 60 Query: 92 TRFGNMAAAMKYFWDGTSPQWLSGTLAGKPACVFTSTGSLHGGQESTLLSMMLPLLHHGM 151 TRFGNMA+ +KYFWDGTS QWL G LAGKPACVFTSTGSLHGGQESTLL+MM+PLLHHGM Sbjct: 61 TRFGNMASPLKYFWDGTSAQWLGGALAGKPACVFTSTGSLHGGQESTLLTMMMPLLHHGM 120 Query: 152 LIVGLPYSHPELMNTSSGGTPYGASHWAGVNGNQPLSDDSRTLAIALGKRLAENAIKLR 210 +I+GLPY+HPELM TSSGGTPYGASHW+G+NG P+SDDSRTL IALG+RLAE A K+R Sbjct: 121 MILGLPYTHPELMTTSSGGTPYGASHWSGLNGKHPISDDSRTLTIALGRRLAETAQKMR 179