BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4094.p (466 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776688.1| 3-isopropylmalate dehydratase large subunit ... 912 0.0 ref|YP_004752521.1| 3-isopropylmalate dehydratase large subunit ... 859 0.0 ref|YP_001353862.1| 3-isopropylmalate dehydratase large subunit ... 858 0.0 ref|YP_001099519.1| isopropylmalate isomerase large subunit [Her... 849 0.0 ref|ZP_08272573.1| 3-isopropylmalate dehydratase large subunit [... 827 0.0 >ref|YP_003776688.1| 3-isopropylmalate dehydratase large subunit [Herbaspirillum seropedicae SmR1] gb|ADJ64780.1| 3-isopropylmalate dehydratase (large subunit) protein [Herbaspirillum seropedicae SmR1] Length = 466 Score = 912 bits (2356), Expect = 0.0, Method: Composition-based stats. Identities = 461/466 (98%), Positives = 464/466 (99%) Query: 1 MLKTLYDKLWESHVVHTEDDGTAILYIDRHLLHEVTSPQAFEGLKLAGRQPWRNSANLMV 60 MLKTLYDKLWESHVVHTEDDGTAILYIDRHLLHEVTSPQAFEGLKLAGRQPWRNSANLMV Sbjct: 1 MLKTLYDKLWESHVVHTEDDGTAILYIDRHLLHEVTSPQAFEGLKLAGRQPWRNSANLMV 60 Query: 61 ADHNVPTTDRAQGIADPISRLQVETLDGNAKEFSLTYFGMNDKRQGIVHVIGPEQGATLP 120 ADHNVPTTDRA GIADPISRLQVETLDGNAKE+SLTYFGMNDKRQGIVHVIGPEQGATLP Sbjct: 61 ADHNVPTTDRAHGIADPISRLQVETLDGNAKEYSLTYFGMNDKRQGIVHVIGPEQGATLP 120 Query: 121 GMTVVCGDSHTSTHGAFAALAHGIGTSEVEHVLATQTLLARKSKAMLVQVDGALPAGVTA 180 GMTVVCGDSHTSTHGAFAALAHGIGTSEVEHVLATQTLLARKSKAMLVQVDGALPAGVTA Sbjct: 121 GMTVVCGDSHTSTHGAFAALAHGIGTSEVEHVLATQTLLARKSKAMLVQVDGALPAGVTA 180 Query: 181 KDIVLAVIGKIGTAGGTGYAIEFAGSTIRSLSMEGRMTVCNMAIEAGARAGMVAFDDTTL 240 KDIVLAVIGKIGTAGGTGYAIEFAGSTIRSLSMEGRMTVCNMAIEAGARAGMVAFDDTTL Sbjct: 181 KDIVLAVIGKIGTAGGTGYAIEFAGSTIRSLSMEGRMTVCNMAIEAGARAGMVAFDDTTL 240 Query: 241 EYLKGRPFSPSGPHWERAVSYWRTLHSDQGAKFDLVVTLNAAEIKPQVTWGTSPEMVVAV 300 EYLKGRPFSPSGPHWERAVSYWR+LHSD GAKFD+VVTLNAAEIKPQVTWGTSPEMVVAV Sbjct: 241 EYLKGRPFSPSGPHWERAVSYWRSLHSDPGAKFDMVVTLNAAEIKPQVTWGTSPEMVVAV 300 Query: 301 DARVPDPDKEKDPTKRDGMEKALAYMALKPNTPIEDIRIDKVFIGSCTNSRIEDLREAAK 360 DARVPDPDKEKDPTKRDGMEKALAYMALKPNTPIEDIRIDKVFIGSCTNSRIEDLREAAK Sbjct: 301 DARVPDPDKEKDPTKRDGMEKALAYMALKPNTPIEDIRIDKVFIGSCTNSRIEDLREAAK 360 Query: 361 VVRGKFRASNVKLAMVVPGSGLVKEQAEREGLDKIFRDAGFEWREPGCSMCLAMNADRLE 420 VVRGKFRASNVKLAMVVPGSGLVKEQAEREGLDKIFRDAGFEWREPGCSMCLAMNADRLE Sbjct: 361 VVRGKFRASNVKLAMVVPGSGLVKEQAEREGLDKIFRDAGFEWREPGCSMCLAMNADRLE 420 Query: 421 PGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAGIAGHFVDVRSL 466 PGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAGIAGHFVDVRSL Sbjct: 421 PGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAGIAGHFVDVRSL 466 >ref|YP_004752521.1| 3-isopropylmalate dehydratase large subunit [Collimonas fungivorans Ter331] gb|AEK61698.1| 3-isopropylmalate dehydratase large subunit [Collimonas fungivorans Ter331] Length = 466 Score = 859 bits (2219), Expect = 0.0, Method: Composition-based stats. Identities = 431/466 (92%), Positives = 446/466 (95%) Query: 1 MLKTLYDKLWESHVVHTEDDGTAILYIDRHLLHEVTSPQAFEGLKLAGRQPWRNSANLMV 60 MLKTLYDKLWESHVVHTE DGTAILYIDRHLLHEVTSPQAFEGLKLAGR+PWR +ANLMV Sbjct: 1 MLKTLYDKLWESHVVHTEQDGTAILYIDRHLLHEVTSPQAFEGLKLAGRKPWRQAANLMV 60 Query: 61 ADHNVPTTDRAQGIADPISRLQVETLDGNAKEFSLTYFGMNDKRQGIVHVIGPEQGATLP 120 ADHNVPTT RA GIADPISRLQVETLD NAK + LTYFGMND RQGIVHVIGPEQGATLP Sbjct: 61 ADHNVPTTGRANGIADPISRLQVETLDANAKSYDLTYFGMNDHRQGIVHVIGPEQGATLP 120 Query: 121 GMTVVCGDSHTSTHGAFAALAHGIGTSEVEHVLATQTLLARKSKAMLVQVDGALPAGVTA 180 GMTVVCGDSHTSTHGAF LAHGIGTSEVEHVLATQTLL +KSK+MLVQVDGA+PAGVTA Sbjct: 121 GMTVVCGDSHTSTHGAFGCLAHGIGTSEVEHVLATQTLLTKKSKSMLVQVDGAIPAGVTA 180 Query: 181 KDIVLAVIGKIGTAGGTGYAIEFAGSTIRSLSMEGRMTVCNMAIEAGARAGMVAFDDTTL 240 KDIVLAVIG+IGTAGGTGYAIEFAGS IR+LSMEGRMTVCNMAIEAGARAGM+A DDTTL Sbjct: 181 KDIVLAVIGRIGTAGGTGYAIEFAGSAIRALSMEGRMTVCNMAIEAGARAGMIAVDDTTL 240 Query: 241 EYLKGRPFSPSGPHWERAVSYWRTLHSDQGAKFDLVVTLNAAEIKPQVTWGTSPEMVVAV 300 Y+KGRPFSP+GPHWERAV+YWRTLHSDQGAKFD+VVTL AAEIKPQVTWGTSPEMVVAV Sbjct: 241 NYVKGRPFSPAGPHWERAVTYWRTLHSDQGAKFDMVVTLGAAEIKPQVTWGTSPEMVVAV 300 Query: 301 DARVPDPDKEKDPTKRDGMEKALAYMALKPNTPIEDIRIDKVFIGSCTNSRIEDLREAAK 360 D RVPDPDKEKD TKRDGMEKALAYMALKPNT IEDIRIDKVFIGSCTNSRIEDLR AA Sbjct: 301 DGRVPDPDKEKDATKRDGMEKALAYMALKPNTAIEDIRIDKVFIGSCTNSRIEDLRAAAA 360 Query: 361 VVRGKFRASNVKLAMVVPGSGLVKEQAEREGLDKIFRDAGFEWREPGCSMCLAMNADRLE 420 VVRGKFRASNVKLAMVVPGSGLVKEQAEREGLDKIF+DAGFEWREPGCSMCLAMNADRLE Sbjct: 361 VVRGKFRASNVKLAMVVPGSGLVKEQAEREGLDKIFKDAGFEWREPGCSMCLAMNADRLE 420 Query: 421 PGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAGIAGHFVDVRSL 466 PGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAGIAGHFVD+RSL Sbjct: 421 PGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAGIAGHFVDIRSL 466 >ref|YP_001353862.1| 3-isopropylmalate dehydratase large subunit [Janthinobacterium sp. Marseille] sp|A6T015|LEUC_JANMA RecName: Full=3-isopropylmalate dehydratase large subunit; AltName: Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate isomerase gb|ABR88947.1| 3-isopropylmalate dehydratase large subunit [Janthinobacterium sp. Marseille] Length = 468 Score = 858 bits (2216), Expect = 0.0, Method: Composition-based stats. Identities = 424/466 (90%), Positives = 438/466 (93%) Query: 1 MLKTLYDKLWESHVVHTEDDGTAILYIDRHLLHEVTSPQAFEGLKLAGRQPWRNSANLMV 60 M +TLYDKLW+SHVV T DDGT +LYIDRHLLHEVTSPQAFEGLKLAGR+PWR SANLMV Sbjct: 1 MAQTLYDKLWQSHVVETGDDGTTVLYIDRHLLHEVTSPQAFEGLKLAGRRPWRVSANLMV 60 Query: 61 ADHNVPTTDRAQGIADPISRLQVETLDGNAKEFSLTYFGMNDKRQGIVHVIGPEQGATLP 120 ADHNVPTTDRA GIADP SRLQVETLDGNA E+ LTYF M DKRQGIVHVIGPEQGATLP Sbjct: 61 ADHNVPTTDRANGIADPTSRLQVETLDGNAHEYGLTYFSMRDKRQGIVHVIGPEQGATLP 120 Query: 121 GMTVVCGDSHTSTHGAFAALAHGIGTSEVEHVLATQTLLARKSKAMLVQVDGALPAGVTA 180 GMTVVCGDSHTSTHGAF LAHGIGTSEVEHVLATQTLLA+KSKAMLVQVDGALP GVTA Sbjct: 121 GMTVVCGDSHTSTHGAFGCLAHGIGTSEVEHVLATQTLLAQKSKAMLVQVDGALPDGVTA 180 Query: 181 KDIVLAVIGKIGTAGGTGYAIEFAGSTIRSLSMEGRMTVCNMAIEAGARAGMVAFDDTTL 240 KDIVLAVIGKIGTAGGTGYAIEFAGSTIRSLSMEGRMT+CNMAIEAGARAGMVA DD T+ Sbjct: 181 KDIVLAVIGKIGTAGGTGYAIEFAGSTIRSLSMEGRMTICNMAIEAGARAGMVAVDDITI 240 Query: 241 EYLKGRPFSPSGPHWERAVSYWRTLHSDQGAKFDLVVTLNAAEIKPQVTWGTSPEMVVAV 300 Y+KGRP SP GPHW+RAV YWRTLHSD GAKFDLVVTLNAAEIKPQV+WGTSPEMVVAV Sbjct: 241 NYVKGRPLSPVGPHWDRAVEYWRTLHSDAGAKFDLVVTLNAAEIKPQVSWGTSPEMVVAV 300 Query: 301 DARVPDPDKEKDPTKRDGMEKALAYMALKPNTPIEDIRIDKVFIGSCTNSRIEDLREAAK 360 D RVPDPDKEKDPTKRDGMEKAL YMALKPNTPI DIRIDKVFIGSCTNSRIEDLR AA Sbjct: 301 DGRVPDPDKEKDPTKRDGMEKALIYMALKPNTPITDIRIDKVFIGSCTNSRIEDLRAAAA 360 Query: 361 VVRGKFRASNVKLAMVVPGSGLVKEQAEREGLDKIFRDAGFEWREPGCSMCLAMNADRLE 420 VVRGK+RASNVKLAMVVPGSGLVKEQAEREGLDKIF+ AGFEWREPGCSMCLAMNADRLE Sbjct: 361 VVRGKYRASNVKLAMVVPGSGLVKEQAEREGLDKIFKAAGFEWREPGCSMCLAMNADRLE 420 Query: 421 PGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAGIAGHFVDVRSL 466 PGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAGI GHFVDVR+L Sbjct: 421 PGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAGIEGHFVDVRAL 466 >ref|YP_001099519.1| isopropylmalate isomerase large subunit [Herminiimonas arsenicoxydans] sp|A4G4F5|LEUC_HERAR RecName: Full=3-isopropylmalate dehydratase large subunit; AltName: Full=Alpha-IPM isomerase; Short=IPMI; AltName: Full=Isopropylmalate isomerase emb|CAL61392.1| 3-isopropylmalate dehydratase large subunit (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) [Herminiimonas arsenicoxydans] Length = 466 Score = 849 bits (2193), Expect = 0.0, Method: Composition-based stats. Identities = 418/466 (89%), Positives = 438/466 (93%) Query: 1 MLKTLYDKLWESHVVHTEDDGTAILYIDRHLLHEVTSPQAFEGLKLAGRQPWRNSANLMV 60 M +TLYDKLW+SHVV T DDGT +LYIDRHLLHEVTSPQAFEGLKLAGR+PWR SANLMV Sbjct: 1 MAQTLYDKLWQSHVVDTGDDGTTVLYIDRHLLHEVTSPQAFEGLKLAGRRPWRVSANLMV 60 Query: 61 ADHNVPTTDRAQGIADPISRLQVETLDGNAKEFSLTYFGMNDKRQGIVHVIGPEQGATLP 120 ADHNVPTTDR++GIADP SRLQVETLD NA E+ LTYF M DKRQGIVHVIGPEQGATLP Sbjct: 61 ADHNVPTTDRSEGIADPTSRLQVETLDHNAHEYGLTYFSMRDKRQGIVHVIGPEQGATLP 120 Query: 121 GMTVVCGDSHTSTHGAFAALAHGIGTSEVEHVLATQTLLARKSKAMLVQVDGALPAGVTA 180 GMTVVCGDSHTSTHGAF ALAHGIGTSEVEHVLATQTLLA+KSKAMLVQVDGALP GVTA Sbjct: 121 GMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLLAQKSKAMLVQVDGALPVGVTA 180 Query: 181 KDIVLAVIGKIGTAGGTGYAIEFAGSTIRSLSMEGRMTVCNMAIEAGARAGMVAFDDTTL 240 KDIVLA+IGKIGTAGGTGYAIEFAGSTIRSLSMEGRMT+CNMAIEAGARAGMVA D+TT+ Sbjct: 181 KDIVLAIIGKIGTAGGTGYAIEFAGSTIRSLSMEGRMTICNMAIEAGARAGMVAVDETTI 240 Query: 241 EYLKGRPFSPSGPHWERAVSYWRTLHSDQGAKFDLVVTLNAAEIKPQVTWGTSPEMVVAV 300 Y+KGRP SP GPHW+RAV YWRTLHSD GAKFDLVVTLNAAE+KPQV+WGTSPEMVV+V Sbjct: 241 NYVKGRPLSPVGPHWDRAVEYWRTLHSDVGAKFDLVVTLNAAEVKPQVSWGTSPEMVVSV 300 Query: 301 DARVPDPDKEKDPTKRDGMEKALAYMALKPNTPIEDIRIDKVFIGSCTNSRIEDLREAAK 360 D RVPDPDKEKD TKRDGMEKAL YM LKPNTPI DIRIDKVFIGSCTNSRI+DLR AA Sbjct: 301 DGRVPDPDKEKDATKRDGMEKALVYMGLKPNTPITDIRIDKVFIGSCTNSRIQDLRAAAA 360 Query: 361 VVRGKFRASNVKLAMVVPGSGLVKEQAEREGLDKIFRDAGFEWREPGCSMCLAMNADRLE 420 VVRGK RASNVKLAMVVPGSGLVKEQAEREGLDKIF+DAGFEWREPGCSMCLAMNADRLE Sbjct: 361 VVRGKHRASNVKLAMVVPGSGLVKEQAEREGLDKIFKDAGFEWREPGCSMCLAMNADRLE 420 Query: 421 PGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAGIAGHFVDVRSL 466 PGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAGI GHFVDVR+L Sbjct: 421 PGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAGIEGHFVDVRAL 466 >ref|ZP_08272573.1| 3-isopropylmalate dehydratase large subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF33962.1| 3-isopropylmalate dehydratase large subunit [Oxalobacteraceae bacterium IMCC9480] Length = 466 Score = 827 bits (2136), Expect = 0.0, Method: Composition-based stats. Identities = 414/466 (88%), Positives = 438/466 (93%) Query: 1 MLKTLYDKLWESHVVHTEDDGTAILYIDRHLLHEVTSPQAFEGLKLAGRQPWRNSANLMV 60 M +TLYDKLW+SHVV T DGT ILYIDRHL+HEVTSPQAF+GLKLAGRQPWR SANL V Sbjct: 1 MAQTLYDKLWDSHVVDTASDGTTILYIDRHLVHEVTSPQAFDGLKLAGRQPWRLSANLAV 60 Query: 61 ADHNVPTTDRAQGIADPISRLQVETLDGNAKEFSLTYFGMNDKRQGIVHVIGPEQGATLP 120 ADHNVPTTDRAQGIADP SRLQVETLD NAK + LTYF M DKRQGIVHVIGPEQGATLP Sbjct: 61 ADHNVPTTDRAQGIADPTSRLQVETLDANAKTYGLTYFNMADKRQGIVHVIGPEQGATLP 120 Query: 121 GMTVVCGDSHTSTHGAFAALAHGIGTSEVEHVLATQTLLARKSKAMLVQVDGALPAGVTA 180 GMTVVCGDSHTSTHGAF LAHGIGTSEVEHVLATQTLL +KS++MLVQ+DGALP GVTA Sbjct: 121 GMTVVCGDSHTSTHGAFGCLAHGIGTSEVEHVLATQTLLTKKSRSMLVQIDGALPRGVTA 180 Query: 181 KDIVLAVIGKIGTAGGTGYAIEFAGSTIRSLSMEGRMTVCNMAIEAGARAGMVAFDDTTL 240 KDIVLAVIG+IGTAGG GYAIEFAGSTIRSLSMEGRMTVCNMAIEAGARAGM+A DDTT+ Sbjct: 181 KDIVLAVIGQIGTAGGNGYAIEFAGSTIRSLSMEGRMTVCNMAIEAGARAGMIAVDDTTI 240 Query: 241 EYLKGRPFSPSGPHWERAVSYWRTLHSDQGAKFDLVVTLNAAEIKPQVTWGTSPEMVVAV 300 +Y+KGRPFSP GPHWERAVS+WRTLHSD GA+FDLVV L+A++++PQVTWGTSPEMVVA+ Sbjct: 241 DYVKGRPFSPVGPHWERAVSWWRTLHSDAGARFDLVVRLDASQVRPQVTWGTSPEMVVAI 300 Query: 301 DARVPDPDKEKDPTKRDGMEKALAYMALKPNTPIEDIRIDKVFIGSCTNSRIEDLREAAK 360 D RVPDPDKEKDPTKRD MEKALAYMALKPNT I DIRIDKVFIGSCTNSRIEDLR AA Sbjct: 301 DDRVPDPDKEKDPTKRDSMEKALAYMALKPNTAIADIRIDKVFIGSCTNSRIEDLRAAAA 360 Query: 361 VVRGKFRASNVKLAMVVPGSGLVKEQAEREGLDKIFRDAGFEWREPGCSMCLAMNADRLE 420 VVRGKFRASNV+LAMVVPGSGLVKEQAEREGLDKIFRDAGFEWREPGCSMCLAMNADRLE Sbjct: 361 VVRGKFRASNVRLAMVVPGSGLVKEQAEREGLDKIFRDAGFEWREPGCSMCLAMNADRLE 420 Query: 421 PGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAGIAGHFVDVRSL 466 PGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAGIAGHFVDVR+L Sbjct: 421 PGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAGIAGHFVDVRTL 466