BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4091.p (356 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776686.1| 3-isopropylmalate dehydrogenase oxidoreducta... 702 0.0 ref|YP_584618.1| 3-isopropylmalate dehydrogenase [Cupriavidus me... 645 0.0 ref|YP_296517.1| 3-isopropylmalate dehydrogenase [Ralstonia eutr... 644 0.0 ref|YP_004686301.1| 3-isopropylmalate dehydrogenase LeuB [Cupria... 640 0.0 ref|YP_002006118.1| 3-isopropylmalate dehydrogenase [Cupriavidus... 639 0.0 >ref|YP_003776686.1| 3-isopropylmalate dehydrogenase oxidoreductase [Herbaspirillum seropedicae SmR1] emb|CAM32595.1| 3-isopropylmalate dehydrogenase oxidoreductase protein [Herbaspirillum seropedicae] gb|ADJ64778.1| 3-isopropylmalate dehydrogenase oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 356 Score = 702 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 353/356 (99%), Positives = 356/356 (100%) Query: 1 MKIAILPGDGIGPEIVDEAVRVLNALDEKFEMETAPVGGAGYEAHGHPLPDGTLKLAKEA 60 MKIAILPGDGIGPEIV+EAVRVLNALDEKFEMETAPVGGAGYEAHGHPLPDGTLKLAKEA Sbjct: 1 MKIAILPGDGIGPEIVNEAVRVLNALDEKFEMETAPVGGAGYEAHGHPLPDGTLKLAKEA 60 Query: 61 DAILFGAVGDWKYDKLERALRPEQAILGLRKHLQLFANFRPAICYPELTGASSLKPELVA 120 DAILFGAVGDWKYDKLERALRPEQAILGLRKHLQLFANFRPAICYPELTGASSLKPELVA Sbjct: 61 DAILFGAVGDWKYDKLERALRPEQAILGLRKHLQLFANFRPAICYPELTGASSLKPELVA 120 Query: 121 NLDILIVRELNGDIYFGQPRGMREAPDGPFKGAREGFDTMRYSEPEIRRIAHVAFQAAAK 180 NLDILIVRELNGDIYFGQPRGMREAPDGPFKGAREGFDTMRYSEPEIRRIAHVAFQAAAK Sbjct: 121 NLDILIVRELNGDIYFGQPRGMREAPDGPFKGAREGFDTMRYSEPEIRRIAHVAFQAAAK 180 Query: 181 RGKRLCSVDKANVLETFQFWKDIVTEVGKEYPDVELSHMYVDNAAMQLVKAPKNFDVIVT 240 RGKRLCSVDKANVLETFQFWKDIVTEVGKEYPDVELSHMYVDNAAMQLVKAPKNFDVIVT Sbjct: 181 RGKRLCSVDKANVLETFQFWKDIVTEVGKEYPDVELSHMYVDNAAMQLVKAPKNFDVIVT 240 Query: 241 GNMFGDILSDAAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGIANPLATILSA 300 GNMFGDILSDAAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAG+GIANPLATILSA Sbjct: 241 GNMFGDILSDAAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGRGIANPLATILSA 300 Query: 301 AMMLRFSLNRAEQADRIENAVKKVLAQGLRTADIYEEGCTKVNTQQMGEAVVKALA 356 AMMLRFSLN+AEQADRIENAVKKVLAQGLRTADIYEEGCTKVNTQQMGEAVVKALA Sbjct: 301 AMMLRFSLNKAEQADRIENAVKKVLAQGLRTADIYEEGCTKVNTQQMGEAVVKALA 356 >ref|YP_584618.1| 3-isopropylmalate dehydrogenase [Cupriavidus metallidurans CH34] sp|Q1LKH7|LEU3_RALME RecName: Full=3-isopropylmalate dehydrogenase; AltName: Full=3-IPM-DH; AltName: Full=Beta-IPM dehydrogenase; Short=IMDH gb|ABF09349.1| 3-isopropylmalate dehydrogenase [Cupriavidus metallidurans CH34] Length = 355 Score = 645 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 324/355 (91%), Positives = 338/355 (95%) Query: 1 MKIAILPGDGIGPEIVDEAVRVLNALDEKFEMETAPVGGAGYEAHGHPLPDGTLKLAKEA 60 MKIA+LPGDGIGPEIV EAV+VLNALDEKFEMETAPVGGAGYEA GHPLPD TLKLAKEA Sbjct: 1 MKIAVLPGDGIGPEIVAEAVKVLNALDEKFEMETAPVGGAGYEAEGHPLPDNTLKLAKEA 60 Query: 61 DAILFGAVGDWKYDKLERALRPEQAILGLRKHLQLFANFRPAICYPELTGASSLKPELVA 120 DAILFGAVGDWKYD L+R LRPEQAILGLRKHLQLFANFRPAICYPELTGASSLKPELVA Sbjct: 61 DAILFGAVGDWKYDSLDRPLRPEQAILGLRKHLQLFANFRPAICYPELTGASSLKPELVA 120 Query: 121 NLDILIVRELNGDIYFGQPRGMREAPDGPFKGAREGFDTMRYSEPEIRRIAHVAFQAAAK 180 LDILIVRELNGDIYFGQPRG+REAPDG FKGAREGFDTMRYSEPE+RRIAHVAFQAAAK Sbjct: 121 GLDILIVRELNGDIYFGQPRGVREAPDGLFKGAREGFDTMRYSEPEVRRIAHVAFQAAAK 180 Query: 181 RGKRLCSVDKANVLETFQFWKDIVTEVGKEYPDVELSHMYVDNAAMQLVKAPKNFDVIVT 240 RGK+LCSVDKANVLETFQFWKDIV +V KEYPDVELSHMYVDNAAMQLVKAPK+FDVIVT Sbjct: 181 RGKKLCSVDKANVLETFQFWKDIVIDVSKEYPDVELSHMYVDNAAMQLVKAPKSFDVIVT 240 Query: 241 GNMFGDILSDAAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGIANPLATILSA 300 GNMFGDILSD AAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKG+ANPLATILSA Sbjct: 241 GNMFGDILSDEAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGVANPLATILSA 300 Query: 301 AMMLRFSLNRAEQADRIENAVKKVLAQGLRTADIYEEGCTKVNTQQMGEAVVKAL 355 AMMLR+SLNRAEQADRIENAVKKVLAQG RTADI GC +V T++MGEAV+ AL Sbjct: 301 AMMLRYSLNRAEQADRIENAVKKVLAQGYRTADIVTPGCKQVGTREMGEAVLAAL 355 >ref|YP_296517.1| 3-isopropylmalate dehydrogenase [Ralstonia eutropha JMP134] sp|Q46YW0|LEU3_RALEJ RecName: Full=3-isopropylmalate dehydrogenase; AltName: Full=3-IPM-DH; AltName: Full=Beta-IPM dehydrogenase; Short=IMDH gb|AAZ61673.1| 3-isopropylmalate dehydrogenase [Ralstonia eutropha JMP134] Length = 355 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 324/355 (91%), Positives = 338/355 (95%) Query: 1 MKIAILPGDGIGPEIVDEAVRVLNALDEKFEMETAPVGGAGYEAHGHPLPDGTLKLAKEA 60 MKIA+LPGDGIGPEIV EAV+VLNALDEKFEMETAPVGGAGYEA GHPLP+ TLKLAKEA Sbjct: 1 MKIAVLPGDGIGPEIVAEAVKVLNALDEKFEMETAPVGGAGYEAEGHPLPENTLKLAKEA 60 Query: 61 DAILFGAVGDWKYDKLERALRPEQAILGLRKHLQLFANFRPAICYPELTGASSLKPELVA 120 DAILFGAVGDWKYD LERALRPEQAILGLRKHLQLFANFRPAICYPELTGASSLKPELVA Sbjct: 61 DAILFGAVGDWKYDSLERALRPEQAILGLRKHLQLFANFRPAICYPELTGASSLKPELVA 120 Query: 121 NLDILIVRELNGDIYFGQPRGMREAPDGPFKGAREGFDTMRYSEPEIRRIAHVAFQAAAK 180 LDILIVRELNGDIYFGQPRG+REAPDG FKGAREGFDTMRYSEPEIRRIAHVAFQAAAK Sbjct: 121 GLDILIVRELNGDIYFGQPRGVREAPDGLFKGAREGFDTMRYSEPEIRRIAHVAFQAAAK 180 Query: 181 RGKRLCSVDKANVLETFQFWKDIVTEVGKEYPDVELSHMYVDNAAMQLVKAPKNFDVIVT 240 RGK+LCSVDKANVLETFQFWKDIV +V KEYPDVELSHMYVDNAAMQLVKAPK+FDVIVT Sbjct: 181 RGKKLCSVDKANVLETFQFWKDIVIDVSKEYPDVELSHMYVDNAAMQLVKAPKSFDVIVT 240 Query: 241 GNMFGDILSDAAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGIANPLATILSA 300 GNMFGDILSD AAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKG+ANPLATILSA Sbjct: 241 GNMFGDILSDEAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGVANPLATILSA 300 Query: 301 AMMLRFSLNRAEQADRIENAVKKVLAQGLRTADIYEEGCTKVNTQQMGEAVVKAL 355 AMMLR+SLN+AEQADRIENAVKKVLAQG RT DI GC +V T++MGEAV+ AL Sbjct: 301 AMMLRYSLNKAEQADRIENAVKKVLAQGYRTGDILTPGCKQVGTREMGEAVLAAL 355 >ref|YP_004686301.1| 3-isopropylmalate dehydrogenase LeuB [Cupriavidus necator N-1] gb|AEI77820.1| 3-isopropylmalate dehydrogenase LeuB [Cupriavidus necator N-1] Length = 355 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 321/355 (90%), Positives = 337/355 (94%) Query: 1 MKIAILPGDGIGPEIVDEAVRVLNALDEKFEMETAPVGGAGYEAHGHPLPDGTLKLAKEA 60 MKIA+LPGDGIGPEI+ EAV+VLNALDEKFE+ETAPVGGAGYEA GHPLP+ TLKLAKEA Sbjct: 1 MKIAVLPGDGIGPEIIAEAVKVLNALDEKFELETAPVGGAGYEAEGHPLPENTLKLAKEA 60 Query: 61 DAILFGAVGDWKYDKLERALRPEQAILGLRKHLQLFANFRPAICYPELTGASSLKPELVA 120 DAILFGAVGDWKYD LER LRPEQAILGLRKHLQLFANFRPAICYPELTGASSLKPELVA Sbjct: 61 DAILFGAVGDWKYDSLERPLRPEQAILGLRKHLQLFANFRPAICYPELTGASSLKPELVA 120 Query: 121 NLDILIVRELNGDIYFGQPRGMREAPDGPFKGAREGFDTMRYSEPEIRRIAHVAFQAAAK 180 LDILIVRELNGDIYFGQPRG+REAPDG FKGAREGFDTMRYSEPEIRRIAHVAFQAAAK Sbjct: 121 GLDILIVRELNGDIYFGQPRGVREAPDGLFKGAREGFDTMRYSEPEIRRIAHVAFQAAAK 180 Query: 181 RGKRLCSVDKANVLETFQFWKDIVTEVGKEYPDVELSHMYVDNAAMQLVKAPKNFDVIVT 240 RGK+LCSVDKANVLETFQFWKDIV EV KEYP+VELSHMYVDNAAMQLVKAPK+FDVIVT Sbjct: 181 RGKKLCSVDKANVLETFQFWKDIVIEVHKEYPEVELSHMYVDNAAMQLVKAPKSFDVIVT 240 Query: 241 GNMFGDILSDAAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGIANPLATILSA 300 GNMFGDILSD AAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKG+ANPLATILSA Sbjct: 241 GNMFGDILSDEAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGVANPLATILSA 300 Query: 301 AMMLRFSLNRAEQADRIENAVKKVLAQGLRTADIYEEGCTKVNTQQMGEAVVKAL 355 AMMLR+SLNRAEQADRIENAVKKVLAQG RT DI GC +V T++MG+AV+ AL Sbjct: 301 AMMLRYSLNRAEQADRIENAVKKVLAQGYRTGDILTPGCKQVGTREMGDAVLAAL 355 >ref|YP_002006118.1| 3-isopropylmalate dehydrogenase [Cupriavidus taiwanensis LMG 19424] emb|CAQ70055.1| 3-isopropylmalate dehydrogenase [Cupriavidus taiwanensis LMG 19424] Length = 355 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 321/355 (90%), Positives = 337/355 (94%) Query: 1 MKIAILPGDGIGPEIVDEAVRVLNALDEKFEMETAPVGGAGYEAHGHPLPDGTLKLAKEA 60 MKIA+LPGDGIGPEIV EAV+VLNALDEKFE+ETAPVGGAGYEA GHPLP+ TLKLA+EA Sbjct: 1 MKIAVLPGDGIGPEIVAEAVKVLNALDEKFELETAPVGGAGYEAEGHPLPENTLKLAREA 60 Query: 61 DAILFGAVGDWKYDKLERALRPEQAILGLRKHLQLFANFRPAICYPELTGASSLKPELVA 120 DAILFGAVGDWKYD LERALRPEQAILGLRKHLQLFANFRPAICYPELTGASSLKPELVA Sbjct: 61 DAILFGAVGDWKYDSLERALRPEQAILGLRKHLQLFANFRPAICYPELTGASSLKPELVA 120 Query: 121 NLDILIVRELNGDIYFGQPRGMREAPDGPFKGAREGFDTMRYSEPEIRRIAHVAFQAAAK 180 LDILIVRELNGDIYFGQPRG+REAPDG F+GARE FDTMRYSEPEIRRIAHVAFQAAAK Sbjct: 121 GLDILIVRELNGDIYFGQPRGLREAPDGLFQGAREAFDTMRYSEPEIRRIAHVAFQAAAK 180 Query: 181 RGKRLCSVDKANVLETFQFWKDIVTEVGKEYPDVELSHMYVDNAAMQLVKAPKNFDVIVT 240 RGK+LCSVDKANVLETFQFWKDIV +V KEYPDVELSHMYVDNAAMQLVKAPK+FDVIVT Sbjct: 181 RGKKLCSVDKANVLETFQFWKDIVIDVSKEYPDVELSHMYVDNAAMQLVKAPKSFDVIVT 240 Query: 241 GNMFGDILSDAAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGIANPLATILSA 300 GNMFGDILSD AAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGIANPLATILSA Sbjct: 241 GNMFGDILSDEAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGIANPLATILSA 300 Query: 301 AMMLRFSLNRAEQADRIENAVKKVLAQGLRTADIYEEGCTKVNTQQMGEAVVKAL 355 AMMLR+SLN+AEQADRIENAVKKVLAQG RT DI GC +V T++MGEAV+ AL Sbjct: 301 AMMLRYSLNKAEQADRIENAVKKVLAQGYRTGDILTPGCKQVGTREMGEAVLAAL 355