BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4066.p (399 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776666.1| tryptophanyl-tRNA synthetase [Herbaspirillum... 787 0.0 ref|YP_004752331.1| tryptophanyl-tRNA synthetase [Collimonas fun... 725 0.0 ref|ZP_08273787.1| Tryptophanyl-tRNA synthetase [Oxalobacteracea... 705 0.0 ref|YP_001898565.1| tryptophanyl-tRNA synthetase [Ralstonia pick... 671 0.0 ref|ZP_00945274.1| Tryptophanyl-tRNA synthetase [Ralstonia solan... 669 0.0 >ref|YP_003776666.1| tryptophanyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gb|ADJ64758.1| tryptophanyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Length = 399 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 390/399 (97%), Positives = 396/399 (99%) Query: 1 MYPDRVVSGMRPTGALHLGHYHGALKNWVKLQSELPCLFFVADWHALTTHYDDPSVIETS 60 MYPDRVVSGMRPTGALHLGHYHGALKNWVKLQSELPCLFFVADWHALTTHYDDPSVIETS Sbjct: 1 MYPDRVVSGMRPTGALHLGHYHGALKNWVKLQSELPCLFFVADWHALTTHYDDPSVIETS 60 Query: 61 TWEMVIDWLAAGVDPSQATLFIQSRVPEHAELHLLLSMATPLGWLERVPTYKDQQEKLAD 120 TWEMVIDWLAAGVDP+Q+TLFIQSRVPEHAELHLLLSMATPLGWLERVPTYKDQQEKLAD Sbjct: 61 TWEMVIDWLAAGVDPAQSTLFIQSRVPEHAELHLLLSMATPLGWLERVPTYKDQQEKLAD 120 Query: 121 RDLATYGFLGYPLLQAADVLIYRASQVPVGEDQVPHIEIMREIARRFNHLYGKEKGFEEK 180 RDLATYGFLGYPLLQAADVLIYRASQVPVGEDQVPHIEIMREIARRFNHLYGKEKGFEEK Sbjct: 121 RDLATYGFLGYPLLQAADVLIYRASQVPVGEDQVPHIEIMREIARRFNHLYGKEKGFEEK 180 Query: 181 ALAATKKLGSKRAKLYLELRTQFQEKGDDEALEQAKAMLDDAQNLSMIDRERLFGYLEGS 240 ALAATKKLGSKRA+LYLELRTQFQEKGDDEALEQAKAMLDDAQNLSMIDRERLFGYLEGS Sbjct: 181 ALAATKKLGSKRARLYLELRTQFQEKGDDEALEQAKAMLDDAQNLSMIDRERLFGYLEGS 240 Query: 241 RKLILTEPQAMLTEASRLPGLDGAKMSKSYGNAIALREDAASVTKKVKTMPTDPQRVRRS 300 RKLILTEPQAMLTEASRLPGLDGAKMSKSYGNAIALRED SVTKKVKTMPTDPQRVRRS Sbjct: 241 RKLILTEPQAMLTEASRLPGLDGAKMSKSYGNAIALREDKESVTKKVKTMPTDPQRVRRS 300 Query: 301 DPGDPDKCPVWQFHQVYSTPEVKEWAAKGCRSAGIGCLECKQPVIDAILQEQQPMLERAQ 360 DPGDPDKCPVWQFHQVYS+ EVKEWAAKGCRSAGIGCLECKQPVIDAILQEQQPMLERAQ Sbjct: 301 DPGDPDKCPVWQFHQVYSSAEVKEWAAKGCRSAGIGCLECKQPVIDAILQEQQPMLERAQ 360 Query: 361 PYLDDPSLVRAIVADGCDKARKLAQDTMRDVREAMGLGY 399 PYLDDPSLVRAIVADGC+KARKLAQ+TMRDVREAMGLGY Sbjct: 361 PYLDDPSLVRAIVADGCEKARKLAQETMRDVREAMGLGY 399 >ref|YP_004752331.1| tryptophanyl-tRNA synthetase [Collimonas fungivorans Ter331] gb|AEK61508.1| Tryptophanyl-tRNA synthetase [Collimonas fungivorans Ter331] Length = 400 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 353/399 (88%), Positives = 378/399 (94%) Query: 1 MYPDRVVSGMRPTGALHLGHYHGALKNWVKLQSELPCLFFVADWHALTTHYDDPSVIETS 60 MYPDRVVSGMRPTGALHLGHYHGALKNWV+LQSELPCLFFVADWHALTTHYDDPS+IETS Sbjct: 1 MYPDRVVSGMRPTGALHLGHYHGALKNWVRLQSELPCLFFVADWHALTTHYDDPSLIETS 60 Query: 61 TWEMVIDWLAAGVDPSQATLFIQSRVPEHAELHLLLSMATPLGWLERVPTYKDQQEKLAD 120 TW+M+IDWLAAGVDPSQATLFIQS+VPEHAELHLLLSMATPLGWLERVPTYKDQQEKLAD Sbjct: 61 TWDMLIDWLAAGVDPSQATLFIQSKVPEHAELHLLLSMATPLGWLERVPTYKDQQEKLAD 120 Query: 121 RDLATYGFLGYPLLQAADVLIYRASQVPVGEDQVPHIEIMREIARRFNHLYGKEKGFEEK 180 RDLATYGFLGYPLLQAADVLIYRASQVPVG+DQVPHIE+MREIARRFNHLYGKEKGFEEK Sbjct: 121 RDLATYGFLGYPLLQAADVLIYRASQVPVGDDQVPHIEMMREIARRFNHLYGKEKGFEEK 180 Query: 181 ALAATKKLGSKRAKLYLELRTQFQEKGDDEALEQAKAMLDDAQNLSMIDRERLFGYLEGS 240 A A KKLGSKRAKLY ELRT+FQ++G ++AL QAKAMLDDAQNLSMIDRERLFG+LEGS Sbjct: 181 AQEAVKKLGSKRAKLYNELRTEFQQQGSEDALGQAKAMLDDAQNLSMIDRERLFGFLEGS 240 Query: 241 RKLILTEPQAMLTEASRLPGLDGAKMSKSYGNAIALREDAASVTKKVKTMPTDPQRVRRS 300 RKLIL+EPQA+LTEASRLPGLDG KMSKSYGNAIALRED ++KKV+TMPTDP RVRR+ Sbjct: 241 RKLILSEPQALLTEASRLPGLDGQKMSKSYGNAIALREDKDVLSKKVRTMPTDPARVRRT 300 Query: 301 DPGDPDKCPVWQFHQVYSTPEVKEWAAKGCRSAGIGCLECKQPVIDAILQEQQPMLERAQ 360 DPGDPDKCPVWQFH VYS ++W +KGCRSAGIGCLECKQPVIDAI++EQ+PM ERAQ Sbjct: 301 DPGDPDKCPVWQFHVVYSDDATRQWVSKGCRSAGIGCLECKQPVIDAIVKEQEPMHERAQ 360 Query: 361 PYLDDPSLVRAIVADGCDKARKLAQDTMRDVREAMGLGY 399 YLDDPSLVRAIVADGCD ARKLAQDTMRDVREAMGL Y Sbjct: 361 QYLDDPSLVRAIVADGCDHARKLAQDTMRDVREAMGLSY 399 >ref|ZP_08273787.1| Tryptophanyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32736.1| Tryptophanyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 400 Score = 705 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 341/399 (85%), Positives = 368/399 (92%) Query: 1 MYPDRVVSGMRPTGALHLGHYHGALKNWVKLQSELPCLFFVADWHALTTHYDDPSVIETS 60 MYPDRVVSGMRPTGA+HLGHYHGALKNW++LQSELPCLFFVADWHALTTHYDDPS+IETS Sbjct: 1 MYPDRVVSGMRPTGAMHLGHYHGALKNWIRLQSELPCLFFVADWHALTTHYDDPSIIETS 60 Query: 61 TWEMVIDWLAAGVDPSQATLFIQSRVPEHAELHLLLSMATPLGWLERVPTYKDQQEKLAD 120 TW+M+IDWLAAGVDPSQ+TLFIQS+VPEHAELHLLLSMATPLGWLERVPTYKDQQEKLAD Sbjct: 61 TWDMLIDWLAAGVDPSQSTLFIQSQVPEHAELHLLLSMATPLGWLERVPTYKDQQEKLAD 120 Query: 121 RDLATYGFLGYPLLQAADVLIYRASQVPVGEDQVPHIEIMREIARRFNHLYGKEKGFEEK 180 RDLATYGFLGYPLLQAADVLIYRASQVPVG DQVPHIE+MREIARRFNHLYGKEKGFEEK Sbjct: 121 RDLATYGFLGYPLLQAADVLIYRASQVPVGADQVPHIEMMREIARRFNHLYGKEKGFEEK 180 Query: 181 ALAATKKLGSKRAKLYLELRTQFQEKGDDEALEQAKAMLDDAQNLSMIDRERLFGYLEGS 240 A A KKLG KRAK+Y ELR +QE+G DEAL+QAKAMLDD QNLSMIDRERLFGYLEGS Sbjct: 181 ARDAVKKLGGKRAKIYAELRKAYQEQGKDEALQQAKAMLDDTQNLSMIDRERLFGYLEGS 240 Query: 241 RKLILTEPQAMLTEASRLPGLDGAKMSKSYGNAIALREDAASVTKKVKTMPTDPQRVRRS 300 KLIL EPQ LTE+SRLPGLDG KMSKSYGN+IALRED S+TKK++TMPTDP R+RR+ Sbjct: 241 GKLILVEPQCRLTESSRLPGLDGLKMSKSYGNSIALREDKDSLTKKIRTMPTDPARIRRT 300 Query: 301 DPGDPDKCPVWQFHQVYSTPEVKEWAAKGCRSAGIGCLECKQPVIDAILQEQQPMLERAQ 360 DPGDP+KCPVWQ HQVY+ EW KGC+SAGIGCLECKQPVIDAIL+EQ+PM ERAQ Sbjct: 301 DPGDPEKCPVWQLHQVYTDTSTHEWVMKGCKSAGIGCLECKQPVIDAILKEQEPMRERAQ 360 Query: 361 PYLDDPSLVRAIVADGCDKARKLAQDTMRDVREAMGLGY 399 YLDDPSLVRAIVADG D ARKLAQ+TMRDVR+AMGL Y Sbjct: 361 VYLDDPSLVRAIVADGRDTARKLAQETMRDVRDAMGLSY 399 >ref|YP_001898565.1| tryptophanyl-tRNA synthetase [Ralstonia pickettii 12J] ref|ZP_07675978.1| tryptophan--tRNA ligase [Ralstonia sp. 5_7_47FAA] gb|ACD26133.1| tryptophanyl-tRNA synthetase [Ralstonia pickettii 12J] gb|EFP65722.1| tryptophan--tRNA ligase [Ralstonia sp. 5_7_47FAA] Length = 400 Score = 671 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 316/399 (79%), Positives = 358/399 (89%) Query: 1 MYPDRVVSGMRPTGALHLGHYHGALKNWVKLQSELPCLFFVADWHALTTHYDDPSVIETS 60 M+PDRV+SGMRPTGALHLGHYHG LKNWV+LQ+E PC FFVADWHALTTHY+ P VIE S Sbjct: 1 MFPDRVLSGMRPTGALHLGHYHGVLKNWVRLQAEYPCFFFVADWHALTTHYESPEVIEES 60 Query: 61 TWEMVIDWLAAGVDPSQATLFIQSRVPEHAELHLLLSMATPLGWLERVPTYKDQQEKLAD 120 WEM+IDWLAAGVDP+Q+TLFIQSRVPEHAEL LLLSM TPLGWLERVPTYKDQ EKL + Sbjct: 61 VWEMLIDWLAAGVDPTQSTLFIQSRVPEHAELFLLLSMGTPLGWLERVPTYKDQIEKLKE 120 Query: 121 RDLATYGFLGYPLLQAADVLIYRASQVPVGEDQVPHIEIMREIARRFNHLYGKEKGFEEK 180 +DL+TYGFLGYPLLQAAD+LIYRA VPVGEDQVPH+E+ RE+ARRFN+LYG+E GFEEK Sbjct: 121 KDLSTYGFLGYPLLQAADILIYRAGFVPVGEDQVPHVEMTREVARRFNYLYGREPGFEEK 180 Query: 181 ALAATKKLGSKRAKLYLELRTQFQEKGDDEALEQAKAMLDDAQNLSMIDRERLFGYLEGS 240 AL A KKLG KRAKLYLELRT +QE+G+DEALEQA+A+L ++Q+LSM DRERLFGYLEG+ Sbjct: 181 ALEAAKKLGGKRAKLYLELRTAYQERGEDEALEQARALLAESQSLSMGDRERLFGYLEGA 240 Query: 241 RKLILTEPQAMLTEASRLPGLDGAKMSKSYGNAIALREDAASVTKKVKTMPTDPQRVRRS 300 RK+IL EPQ +LTEASR+PGLDG KMSKSYGN I +RED +V KKV+TMPTDP RVRR+ Sbjct: 241 RKIILPEPQVLLTEASRMPGLDGQKMSKSYGNTIRMREDKETVEKKVRTMPTDPARVRRT 300 Query: 301 DPGDPDKCPVWQFHQVYSTPEVKEWAAKGCRSAGIGCLECKQPVIDAILQEQQPMLERAQ 360 DPGDPDKCPVWQ HQVYS + KEW KGCRSAGIGCLECKQPVI+ IL+EQQPMLERAQ Sbjct: 301 DPGDPDKCPVWQLHQVYSDADTKEWVQKGCRSAGIGCLECKQPVIEGILREQQPMLERAQ 360 Query: 361 PYLDDPSLVRAIVADGCDKARKLAQDTMRDVREAMGLGY 399 Y+DDPSL+RAI+ADGCD ARK+ Q+TMR+VREAMGL Y Sbjct: 361 KYIDDPSLLRAIIADGCDNARKVTQETMREVREAMGLSY 399 >ref|ZP_00945274.1| Tryptophanyl-tRNA synthetase [Ralstonia solanacearum UW551] ref|YP_002259908.1| tryptophanyl-trna synthetase (syw protein) [Ralstonia solanacearum IPO1609] gb|EAP72241.1| Tryptophanyl-tRNA synthetase [Ralstonia solanacearum UW551] emb|CAQ18643.1| tryptophanyl-trna synthetase (syw protein) [Ralstonia solanacearum MolK2] emb|CAQ61841.1| tryptophanyl-trna synthetase (syw protein) [Ralstonia solanacearum IPO1609] gb|AEG69525.1| tryptophanyl-trna synthetase (syw protein) [Ralstonia solanacearum Po82] Length = 400 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 316/399 (79%), Positives = 358/399 (89%) Query: 1 MYPDRVVSGMRPTGALHLGHYHGALKNWVKLQSELPCLFFVADWHALTTHYDDPSVIETS 60 M+P+RV+SGMRPTGALHLGHYHG LKNWV+LQ+E PC FFVADWHALTTHY+ P VIE S Sbjct: 1 MFPERVLSGMRPTGALHLGHYHGVLKNWVRLQAEYPCFFFVADWHALTTHYESPEVIEAS 60 Query: 61 TWEMVIDWLAAGVDPSQATLFIQSRVPEHAELHLLLSMATPLGWLERVPTYKDQQEKLAD 120 WEM+IDWLAAGVDP+QATLFIQSRVPEHAEL LLLSM TPLGWLERVPTYKDQ EKL + Sbjct: 61 VWEMLIDWLAAGVDPTQATLFIQSRVPEHAELFLLLSMGTPLGWLERVPTYKDQIEKLKE 120 Query: 121 RDLATYGFLGYPLLQAADVLIYRASQVPVGEDQVPHIEIMREIARRFNHLYGKEKGFEEK 180 +DL+TYGFLGYPLLQAAD+LIYRA VPVGEDQVPH+E+ RE+ARRFN+LYG+E GFE+K Sbjct: 121 KDLSTYGFLGYPLLQAADILIYRAGFVPVGEDQVPHVEMTREVARRFNYLYGREPGFEQK 180 Query: 181 ALAATKKLGSKRAKLYLELRTQFQEKGDDEALEQAKAMLDDAQNLSMIDRERLFGYLEGS 240 AL A KKLG KRAKLYLELRT +QE+G+D+ALEQA+A+L ++Q+LSM DRERLFGYLEG+ Sbjct: 181 ALDAAKKLGGKRAKLYLELRTAYQERGEDDALEQARALLAESQSLSMGDRERLFGYLEGA 240 Query: 241 RKLILTEPQAMLTEASRLPGLDGAKMSKSYGNAIALREDAASVTKKVKTMPTDPQRVRRS 300 RK+IL EPQ +LTEASR+PGLDG KMSKSY N I +RED ASV KKV+TMPTDP RVRR+ Sbjct: 241 RKIILPEPQVLLTEASRMPGLDGQKMSKSYNNTIRMREDKASVEKKVRTMPTDPARVRRT 300 Query: 301 DPGDPDKCPVWQFHQVYSTPEVKEWAAKGCRSAGIGCLECKQPVIDAILQEQQPMLERAQ 360 DPGDPDKCPVWQ HQVYS + KEW KGCRSAGIGCLECKQPVID IL+EQQPMLERAQ Sbjct: 301 DPGDPDKCPVWQLHQVYSDADTKEWVQKGCRSAGIGCLECKQPVIDGILREQQPMLERAQ 360 Query: 361 PYLDDPSLVRAIVADGCDKARKLAQDTMRDVREAMGLGY 399 Y+DDPSL+RAI+ADGCD ARK+ Q+TMR+VREAMGL Y Sbjct: 361 KYMDDPSLLRAIIADGCDNARKVTQETMREVREAMGLTY 399