BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4061.p (180 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776661.1| FKBP-type peptidyl-prolyl cis-trans isomeras... 282 2e-74 ref|YP_004752337.1| FKBP-type peptidyl-prolyl cis-trans isomeras... 228 3e-58 ref|YP_001352977.1| FKBP-type peptidyl-prolyl cis-trans isomeras... 218 3e-55 ref|YP_001100429.1| FKBP-type peptidyl prolyl cis-trans isomeras... 215 2e-54 ref|YP_002981051.1| fkbp-type peptidyl-prolyl cis-trans isomeras... 208 2e-52 >ref|YP_003776661.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Herbaspirillum seropedicae SmR1] emb|CAM32549.1| FKBP-type peptidyl-prolyl cis-trans isomerase (Rotamase) protein [Herbaspirillum seropedicae] gb|ADJ64753.1| FKBP-type peptidyl-prolyl cis-trans isomerase (Rotamase) protein [Herbaspirillum seropedicae SmR1] Length = 180 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 174/180 (96%), Positives = 176/180 (97%) Query: 1 MKIAKNTVVSVNYKLSDAQNNLIEQSSEPMVYLHGGYHNTLPKIEEALDGKEVGYSATIQ 60 MKIAKNTVVSVNYKLSDAQNNLIEQSSEPMVYLHGGYHNTLPKIEEALDGKE GYS TIQ Sbjct: 1 MKIAKNTVVSVNYKLSDAQNNLIEQSSEPMVYLHGGYHNTLPKIEEALDGKEAGYSTTIQ 60 Query: 61 VEPEDAFGEYDSELVKIEPVERLPQPLEVGMQFEGSPDDDSEESVIFTVTEVADGKAVLD 120 VEPEDAFGEYDSELVKIEPVERLPQPLEVGMQFEGSPDDDSEESVIFTVTEVADGKAVLD Sbjct: 61 VEPEDAFGEYDSELVKIEPVERLPQPLEVGMQFEGSPDDDSEESVIFTVTEVADGKAVLD 120 Query: 121 GNHPLAGIALRFELAVTEVRAASEEEVAHGHVHGAHGHHHHHDDEDEGDAGDHFRSQPLN 180 GNHPLAGIALRFELAVTEVRAASEEEV+HGHVHG HGHHHHH DEDEG+AGDHFRSQPLN Sbjct: 121 GNHPLAGIALRFELAVTEVRAASEEEVSHGHVHGPHGHHHHHHDEDEGEAGDHFRSQPLN 180 >ref|YP_004752337.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Collimonas fungivorans Ter331] gb|AEK61514.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Collimonas fungivorans Ter331] Length = 182 Score = 228 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 125/154 (81%), Positives = 138/154 (89%), Gaps = 2/154 (1%) Query: 1 MKIAKNTVVSVNYKLSDAQNNLIEQSSEPMVYLHGGYHNTLPKIEEALDGKEVGYSATIQ 60 MKIAKNTVV+V YKLSDAQ NLIE+SSEPMVYLHGGY NTLPKIEEALDGKEVGY +Q Sbjct: 3 MKIAKNTVVTVRYKLSDAQGNLIEESSEPMVYLHGGYENTLPKIEEALDGKEVGYQTELQ 62 Query: 61 VEPEDAFGEYDSELVKIEPVERLPQPLEVGMQFEGSPD--DDSEESVIFTVTEVADGKAV 118 VEP+DAFGEYDS LVKIEP RLP PLEVGMQFEG+PD D+ E+++IFTVT++AD K V Sbjct: 63 VEPDDAFGEYDSNLVKIEPRNRLPTPLEVGMQFEGTPDNEDEEEQALIFTVTDIADDKVV 122 Query: 119 LDGNHPLAGIALRFELAVTEVRAASEEEVAHGHV 152 LDGNHPLAGIALRF+L+VTEVRAASEEEVAH HV Sbjct: 123 LDGNHPLAGIALRFDLSVTEVRAASEEEVAHQHV 156 >ref|YP_001352977.1| FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [Janthinobacterium sp. Marseille] gb|ABR90091.1| FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [Janthinobacterium sp. Marseille] Length = 181 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 133/182 (73%), Positives = 152/182 (83%), Gaps = 3/182 (1%) Query: 1 MKIAKNTVVSVNYKLSDAQNNLIEQSSEPMVYLHGGYHNTLPKIEEALDGKEVGYSATIQ 60 MKIAKNTVV+V YKLSDAQ +LIE+ EPMVYLHGGY NTLPKIEEAL+GKE G+ TIQ Sbjct: 1 MKIAKNTVVTVEYKLSDAQGDLIEEGREPMVYLHGGYENTLPKIEEALEGKEAGFEDTIQ 60 Query: 61 VEPEDAFGEYDSELVKIEPVERLPQPLEVGMQFEGSP--DDDSEESVIFTVTEVADGKAV 118 VEPEDAFGEYD LVKIEP RLP+PLEVGMQFEGSP +D+ E+ +IFTVT++AD K V Sbjct: 61 VEPEDAFGEYDPNLVKIEPRARLPEPLEVGMQFEGSPETEDEDEQPLIFTVTDIADDKVV 120 Query: 119 LDGNHPLAGIALRFELAVTEVRAASEEEVAHGHVHGAHGHHHHHDDEDEGDAGDHFRSQP 178 LDGNHPLAG+ALRF L VTEVRAA+EEE+AH HVH HHH D+DEG+ GDHFRS P Sbjct: 121 LDGNHPLAGMALRFNLKVTEVRAATEEEIAHEHVH-GAHGHHHGADDDEGEEGDHFRSHP 179 Query: 179 LN 180 ++ Sbjct: 180 IH 181 >ref|YP_001100429.1| FKBP-type peptidyl prolyl cis-trans isomerase [Herminiimonas arsenicoxydans] emb|CAL62306.1| putative FKBP-type peptidyl-prolyl cis-trans isomerase slyD (PPIase) (Rotamase) (Histidine-rich protein) (WHP) [Herminiimonas arsenicoxydans] Length = 181 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 136/182 (74%), Positives = 159/182 (87%), Gaps = 3/182 (1%) Query: 1 MKIAKNTVVSVNYKLSDAQNNLIEQSSEPMVYLHGGYHNTLPKIEEALDGKEVGYSATIQ 60 MKIAK+TVV+V+YKLSDAQ +LIE+S +PMVYLHGGY NTLPKIEEALDGKEVG+ TIQ Sbjct: 1 MKIAKDTVVTVDYKLSDAQGDLIEESRDPMVYLHGGYENTLPKIEEALDGKEVGFEDTIQ 60 Query: 61 VEPEDAFGEYDSELVKIEPVERLPQPLEVGMQFEGSP--DDDSEESVIFTVTEVADGKAV 118 VEP DAFG+YD +LVKIEP RLP PLEVGMQFEGSP +D+ E+ +IFTVT++AD K V Sbjct: 61 VEPHDAFGDYDPDLVKIEPRGRLPTPLEVGMQFEGSPETEDEDEQPLIFTVTDIADDKVV 120 Query: 119 LDGNHPLAGIALRFELAVTEVRAASEEEVAHGHVHGAHGHHHHHDDEDEGDAGDHFRSQP 178 LDGNHPLAG+ALRF L VT+VRAA+EEE+AHGHVHGAHGHHH DD DEG+ GDHFR+ P Sbjct: 121 LDGNHPLAGMALRFALKVTDVRAATEEEIAHGHVHGAHGHHHGSDD-DEGEEGDHFRTHP 179 Query: 179 LN 180 ++ Sbjct: 180 IH 181 >ref|YP_002981051.1| fkbp-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii 12D] ref|ZP_07675985.1| FKBP-type peptidylprolyl cis-trans isomerase SlyD [Ralstonia sp. 5_7_47FAA] gb|ACS62379.1| fkbp-type peptidyl-prolyl cis-trans isomerase (rotamase) protein [Ralstonia pickettii 12D] gb|EFP65729.1| FKBP-type peptidylprolyl cis-trans isomerase SlyD [Ralstonia sp. 5_7_47FAA] Length = 175 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 113/158 (71%), Positives = 135/158 (85%), Gaps = 1/158 (0%) Query: 1 MKIAKNTVVSVNYKLSDAQNNLIEQSSEPMVYLHGGYHNTLPKIEEALDGKEVGYSATIQ 60 MKIAKNTVVSV YKLSDAQ N+IE+S EPMVYLHGGY T PKIEEALDG+E G+ +Q Sbjct: 1 MKIAKNTVVSVAYKLSDAQGNVIEESDEPMVYLHGGYDGTFPKIEEALDGQEQGFETKLQ 60 Query: 61 VEPEDAFGEYDSELVKIEPVERLPQPLEVGMQFEGSPDD-DSEESVIFTVTEVADGKAVL 119 +EP+DAFG+YD EL+KIEP +R P+PLEVGMQFEG P+D D E+++++TVT+VA+ K VL Sbjct: 61 LEPDDAFGDYDQELIKIEPRDRFPEPLEVGMQFEGVPEDGDEEDAIVYTVTDVAEDKVVL 120 Query: 120 DGNHPLAGIALRFELAVTEVRAASEEEVAHGHVHGAHG 157 DGNHPLAG+ALRFEL VTEVR A+ EE+ HGHVHG HG Sbjct: 121 DGNHPLAGMALRFELKVTEVREATAEEIEHGHVHGEHG 158