BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4060.p (313 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776660.1| transmembrane protein [Herbaspirillum serope... 511 e-143 ref|YP_004752338.1| hypothetical protein CFU_1683 [Collimonas fu... 312 5e-83 ref|YP_001100428.1| putative signal peptide [Herminiimonas arsen... 277 2e-72 ref|ZP_08273795.1| putative transmembrane protein [Oxalobacterac... 270 2e-70 ref|YP_001352978.1| hypothetical protein mma_1288 [Janthinobacte... 238 1e-60 >ref|YP_003776660.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64752.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 308 Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 248/282 (87%), Positives = 262/282 (92%), Gaps = 1/282 (0%) Query: 32 DFSFGVINHAAPGVKGDQALRQALTETDADNLAFVVVNGIKSPSESCDDALYAERHEMLS 91 DFSFGVINHAA G KG+ LRQAL ETDADNLAFVVVNGIKSPSESCDD LY RHE+LS Sbjct: 28 DFSFGVINHAAAG-KGEDTLRQALAETDADNLAFVVVNGIKSPSESCDDTLYNARHELLS 86 Query: 92 QAQNGIFVSLAGSDWITCRDRENRSDAIERLARMREIFYASEFSLGASRLPMLRQSLTPK 151 QAQNG+F+SLAGSDWITCRDRENRSDAIERLARMREIFY+ EFSLGA+RLPMLRQSLTPK Sbjct: 87 QAQNGVFLSLAGSDWITCRDRENRSDAIERLARMREIFYSGEFSLGATRLPMLRQSLTPK 146 Query: 152 FRSYAENTRWEIGNVLFATVNLPAANNHFLLDGGRNNEFEDRLIANRNWLQHLFAFAALK 211 FRSYAENTRWE+GNV+FATVNLPA NNHFLLDGGRNNEFEDRLIANRNWLQHLFAFAALK Sbjct: 147 FRSYAENTRWEVGNVIFATVNLPAGNNHFLLDGGRNNEFEDRLIANRNWLQHLFAFAALK 206 Query: 212 KSAAIVFFSDGNPFGPPPKRSFFRTQRDGFAETRKLFSELAGKFQGRVLVVHAQGGKNKA 271 KSAAIVFFSDGNPFGPPPKRSFFR QRDGFAETR+LFS+L+G F GRVLVVH Q K K Sbjct: 207 KSAAIVFFSDGNPFGPPPKRSFFRAQRDGFAETRRLFSDLSGNFAGRVLVVHGQAPKPKT 266 Query: 272 PAHILWTGNLGSVGVGERWLKVVVDDHLPQLFAVADADGERR 313 P+HILWTG LG+V VGERWLK+VVDDHLPQLFAVADADGERR Sbjct: 267 PSHILWTGKLGNVAVGERWLKIVVDDHLPQLFAVADADGERR 308 >ref|YP_004752338.1| hypothetical protein CFU_1683 [Collimonas fungivorans Ter331] gb|AEK61515.1| Conserved hypothetical protein; putative signal peptide [Collimonas fungivorans Ter331] Length = 321 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 156/285 (54%), Positives = 198/285 (69%), Gaps = 2/285 (0%) Query: 24 GAARAAGQDFSFGVINHAAPGVKGDQALRQALTETDADNLAFVVVNGIKSPSESCDDALY 83 G A FSFGVI H + ALR A++ETDADNLAFVV NGIK+ SE C D LY Sbjct: 26 GTVLAETSGFSFGVIAHVFRSNADETALRGAISETDADNLAFVVANGIKASSEPCTDKLY 85 Query: 84 AERHEMLSQAQNGIFVSLAGSDWITCRDRENRSDAIERLARMREIFYASEFSLGASRLPM 143 +R +LS A+NG+ VSL+ SDW+TCR +RS AIERL+R+RE+F++ EFS G S++P+ Sbjct: 86 GQRKALLSSAKNGLIVSLSASDWVTCRTTADRSAAIERLSRIRELFFSDEFSFGDSKIPL 145 Query: 144 LRQSLTPKFRSYAENTRWEIGNVLFATVNLPAANNHFLLDGGRNNEFEDRLIANRNWLQH 203 +RQS +PKFRSY EN RWEIGNV+FAT+NLPAANNH+L +GGRN+EFEDR IANR WLQ Sbjct: 146 IRQSTSPKFRSYVENARWEIGNVVFATINLPAANNHYLAEGGRNSEFEDRQIANREWLQR 205 Query: 204 LFAFAALKKSAAIVFFSDGNPFGPPPKRSF-FRTQRDGFAETRKLFSELAGKFQGRVLVV 262 +F A+ KKS A+V F DG+P R F F +RDGF E R+ + A F+G+VLV+ Sbjct: 206 VFLNASQKKSDAVVLFCDGDPLATQRHRVFDFNVKRDGFTEIRQRINSHAAHFEGKVLVI 265 Query: 263 HA-QGGKNKAPAHILWTGNLGSVGVGERWLKVVVDDHLPQLFAVA 306 H G + PA+I+W NLG + V WLKV VD +LF + Sbjct: 266 HGPHGTASTNPANIIWQRNLGDLEVPAGWLKVTVDPASAKLFELG 310 >ref|YP_001100428.1| putative signal peptide [Herminiimonas arsenicoxydans] emb|CAL62305.1| Conserved hypothetical protein; putative exported protein [Herminiimonas arsenicoxydans] Length = 316 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 138/295 (46%), Positives = 189/295 (64%), Gaps = 5/295 (1%) Query: 14 CFTAAILMAGGAARAA-GQDFSFGVINHAAPGVKGDQALRQALTETDADNLAFVVVNGIK 72 C T +L+ A FSFGVI G+ +R A+ E+DADNLAFVV NGIK Sbjct: 8 CVTCLVLLQAPWAHGTPASPFSFGVIAKQLKAANGEATVRNAIAESDADNLAFVVANGIK 67 Query: 73 SPSESCDDALYAERHEMLSQAQNGIFVSLAGSDWITCRDRENRSDAIERLARMREIFYAS 132 + E C D +Y R +L+ A+NG+ VS+ SDW C + +NRS A +R++R+R++F+A Sbjct: 68 AVDEPCTDTVYKNRRALLNSAKNGLVVSITASDWAQCVNAKNRSIATDRISRLRDLFFAD 127 Query: 133 EFSLGASRLPMLRQSLTPKFRSYAENTRWEIGNVLFATVNLPAANNHFLLDGGRNNEFED 192 EFSLG S++P++RQS P+FR YAEN RW I +V+FAT+NLP+ NN++L GRN+EFED Sbjct: 128 EFSLGDSKIPLIRQSSMPQFRMYAENMRWRINDVMFATINLPSNNNNYLNAAGRNSEFED 187 Query: 193 RLIANRNWLQHLFAFAALKKSAAIVFFSDGNPFGPPPKRSFFRT--QRDGFAETRKLFSE 250 R IAN +WL+ LF A + K IV F DGNPF P SFF + +R+G+A R+ Sbjct: 188 RQIANTDWLKRLFLTAKIGKLDGIVLFCDGNPFVPAEHTSFFSSDNKREGYANIRRQIMA 247 Query: 251 LAGKFQGRVLVVHAQGGKNK--APAHILWTGNLGSVGVGERWLKVVVDDHLPQLF 303 A KF GR+L+VH+ ++ AP +I W GN+G+ W K+ VD LPQLF Sbjct: 248 FAAKFPGRILIVHSDQNAHQVSAPRNIDWHGNIGTFRADTPWRKISVDSALPQLF 302 >ref|ZP_08273795.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32744.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 302 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 142/286 (49%), Positives = 184/286 (64%), Gaps = 20/286 (6%) Query: 27 RAAGQDFSFGVINHAAPGVKGDQALRQALTETDADNLAFVVVNGIKSPSESCDDALYAER 86 +AAG F V+ GD AL +A+ +TD DNLAFVVVNGIK+ +C DA+Y ER Sbjct: 19 QAAGDSFRIAVL-----ATIGDNALERAIADTDDDNLAFVVVNGIKAADAACSDAVYLER 73 Query: 87 HEMLSQAQNGIFVSLAGSDWITCRDRENRSDAIERLARMREIFYASEFSLGASRLPMLRQ 146 +L A+NG+ +SLAGSDW CR+ +S A+ERL R+R++F+ EFS GASR+P+LRQ Sbjct: 74 KILLDSAKNGVILSLAGSDWTACRNTAGQSIAMERLTRLRDLFFTGEFSFGASRIPLLRQ 133 Query: 147 SLTPKFRSYAENTRWEIGNVLFATVNLPAANNHFLLDGGRNNEFEDRLIANRNWLQHLFA 206 S TPKFRSYAEN WE+G + FAT+NLPA NNHFL GRN+EFEDR IAN WLQ L A Sbjct: 134 SGTPKFRSYAENAHWEVGAIQFATINLPADNNHFLAAAGRNSEFEDRQIANHAWLQRLIA 193 Query: 207 FAALKKSAAIVFFSDGNPF----GPPPKRSFFRTQRDGFAETRKLFSELAGKFQGRVLVV 262 A +K AA+V F DGN PPP RDGFA+ R ++LA + G+VL+V Sbjct: 194 NATHRKLAALVLFCDGNLMLPKKNPPP--------RDGFAQLRGQLTQLAAGYPGKVLLV 245 Query: 263 HAQGGKNKAPAHILWTGNLGSVGVGERWLKVVVDDHLPQLFAVADA 308 H G A I W N+G++ VG +++ + P LF V+D+ Sbjct: 246 HEGAG---ATGDIRWRDNIGTLAVGSGGIRLTITPEGPALFVVSDS 288 >ref|YP_001352978.1| hypothetical protein mma_1288 [Janthinobacterium sp. Marseille] gb|ABR91052.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 314 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 120/276 (43%), Positives = 175/276 (63%), Gaps = 3/276 (1%) Query: 33 FSFGVINHAAPGVKGDQALRQALTETDADNLAFVVVNGIKSPSESCDDALYAERHEMLSQ 92 FSFGVI + + ALR+A++E+DADNLAFVV G+K+ E C DALY R +L Sbjct: 28 FSFGVIAKPVKANESEAALREAISESDADNLAFVVAGGLKAAEEPCTDALYRNRKTLLDS 87 Query: 93 AQNGIFVSLAGSDWITCRDRENRSDAIERLARMREIFYASEFSLGASRLPMLRQSLTPKF 152 A+NGI ++++G DW C + +NR A +R+ R+RE+ + EFS G S++P++RQS+ P+F Sbjct: 88 AKNGIVLAVSGDDWTRCVNTKNRLIATDRMNRLRELLFTDEFSFGDSKIPVVRQSMMPQF 147 Query: 153 RSYAENTRWEIGNVLFATVNLPAANNHFLLDGGRNNEFEDRLIANRNWLQHLFAFAALKK 212 RSY EN RW IG+V+FAT+N+PA NN++L G N EFEDR AN +WL+ LF A + K Sbjct: 148 RSYPENMRWRIGDVMFATINVPANNNNYLNAAGHNTEFEDRQTANSDWLKRLFLTAKISK 207 Query: 213 SAAIVFFSDGNPFGPPPKRSFFRT-QRDGFAETRKLFSELAGKFQGRVLVVHAQGGKNKA 271 +V F DGNP S F + +R+GFA+ R+ K++G++L+VH+ A Sbjct: 208 VDGVVIFCDGNPLLQAEHSSMFSSGKREGFADLRRQILAFGEKYRGKILIVHSDYNTRPA 267 Query: 272 --PAHILWTGNLGSVGVGERWLKVVVDDHLPQLFAV 305 P I W GN+G++ + W K+ V+ LF + Sbjct: 268 TSPKGISWRGNIGALRIEPPWRKIHVNPASTDLFTL 303