BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4059.p (908 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776659.1| DNA mismatch repair protein [Herbaspirillum ... 1621 0.0 ref|YP_001352979.1| DNA mismatch repair protein MutS [Janthinoba... 1322 0.0 sp|A4G717|MUTS_HERAR RecName: Full=DNA mismatch repair protein m... 1297 0.0 ref|YP_001100427.1| DNA mismatch repair protein MutS [Herminiimo... 1292 0.0 ref|YP_004752339.1| DNA mismatch repair protein MutS [Collimonas... 1278 0.0 >ref|YP_003776659.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1] gb|ADJ64751.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1] Length = 894 Score = 1621 bits (4197), Expect = 0.0, Method: Composition-based stats. Identities = 843/893 (94%), Positives = 867/893 (97%), Gaps = 3/893 (0%) Query: 18 EEVSRHTPMMQQYLRIKADHPNTLVFYRMGDFYELFFEDAEKASRLMGVTLTQRGSSNGN 77 ++++ HTPMMQQYLRIKADHPNTLVFYRMGDFYELFFEDAEKASRLMGVTLTQRGSSNG Sbjct: 3 KDLAAHTPMMQQYLRIKADHPNTLVFYRMGDFYELFFEDAEKASRLMGVTLTQRGSSNGT 62 Query: 78 PIKMAGVPFHSVEQYLARLIKLGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTDSDL 137 PIKMAGVPFHSVEQYLARLIKLGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTDSDL Sbjct: 63 PIKMAGVPFHSVEQYLARLIKLGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTDSDL 122 Query: 138 LPEKSERCLLAMQLLPSKSRKQMQVGLAWLSMASGALKMMEFTVESSLLDGRVKQELERI 197 LPEK+ERCLLAMQL+PSKSRKQMQVGL+WLSMASGALKMMEFTVE++LLDGRVKQELERI Sbjct: 123 LPEKAERCLLAMQLVPSKSRKQMQVGLSWLSMASGALKMMEFTVEAALLDGRVKQELERI 182 Query: 198 SAAEVLVADGQLEQCEPLLPNRAVTVPDWHFDQPSSEKALLDQLGVATLHGFGADGLGPA 257 SAAEVLVADGQLE CEPLLPNRAVTVPDWHFDQPSSEKALLDQLGVATLHGFGADGLGPA Sbjct: 183 SAAEVLVADGQLEWCEPLLPNRAVTVPDWHFDQPSSEKALLDQLGVATLHGFGADGLGPA 242 Query: 258 ICAAGALLRYAQSTQGRGLQHVRTLTVESENEFIGLDAATRRNLELTETIRSQDANALAP 317 ICAAGALLRYAQSTQGRGLQHVRTLTVESENEFIGLDAATRRNLELTETIRSQDANALAP Sbjct: 243 ICAAGALLRYAQSTQGRGLQHVRTLTVESENEFIGLDAATRRNLELTETIRSQDANALAP 302 Query: 318 TLFSTLDHCRTAMGSRLLRHWLHHALRDQQVARERHAAINALMRTDACSGLSATLAAVPD 377 TLFSTLDHCRTAMGSRLLRHWLHHALRDQQVAR RHAAINALMRTDACSGLSATLAAVPD Sbjct: 303 TLFSTLDHCRTAMGSRLLRHWLHHALRDQQVARARHAAINALMRTDACSGLSATLAAVPD 362 Query: 378 IERITTRIALLSARPRDLAGLRSGLQQLGSLRAYVEMCARDAEAPLLGKLHEDLATPVEC 437 IERITTRIALLSARPRDLAGLR+GLQQLGSLRAYVEMC RDA+A LL +LHEDLATPVEC Sbjct: 363 IERITTRIALLSARPRDLAGLRAGLQQLGSLRAYVEMCGRDADASLLTQLHEDLATPVEC 422 Query: 438 LDLLERAIMLEPAAMVRDGGVIARGYDAELDELRGLSENAGQYLLELEARERERTGIANL 497 LDLLERAIMLEPAAMVRDGGVIARG+DAELDELRGLSENAGQYLL+LEARERERTGIANL Sbjct: 423 LDLLERAIMLEPAAMVRDGGVIARGFDAELDELRGLSENAGQYLLDLEARERERTGIANL 482 Query: 498 RVEYNKVHGFYIEVTHGQTDKVPEDYRRRQTLKNAERYIIPELKAFEDKALSAQERSLSR 557 RVEYNKVHGFYIEVTHGQTDKVPEDYRRRQTLKNAERYIIPELKAFEDKALSAQERSLSR Sbjct: 483 RVEYNKVHGFYIEVTHGQTDKVPEDYRRRQTLKNAERYIIPELKAFEDKALSAQERSLSR 542 Query: 558 EKFLYEQLLNDMGAHIVRLQSIAHALAQLDTLVALADHAVRNNWCAPQLVDEPCIQIEQG 617 EKFLYEQLL DMGAHIVRLQ+IAHALAQLDTLVALADHAVRNNWCAPQLVDEPCIQIEQG Sbjct: 543 EKFLYEQLLGDMGAHIVRLQAIAHALAQLDTLVALADHAVRNNWCAPQLVDEPCIQIEQG 602 Query: 618 RHPVVENQIERFIANDCQLAAERKLLLITGPNMGGKSTFMRQVALITLLAYVGSFVPATS 677 RHPVVENQIERFIANDCQLAAER+LLLITGPNMGGKS FMRQVALITLLAYVGSFVPATS Sbjct: 603 RHPVVENQIERFIANDCQLAAERRLLLITGPNMGGKSIFMRQVALITLLAYVGSFVPATS 662 Query: 678 AVIGPIDRIFTRIGAADDLAGGRSTFMVEMTESASILNNATEHSLVLMDEVGRGTSTFDG 737 AVIGP+DRIFTRIGAADDLAGGRSTFMVEMTESA+ILNNATEHSLVLMDEVGRGTSTFDG Sbjct: 663 AVIGPVDRIFTRIGAADDLAGGRSTFMVEMTESAAILNNATEHSLVLMDEVGRGTSTFDG 722 Query: 738 LALAWAIAKHLIDVTRSFTLFATHYFELTQLPEIHPTAANVHLSAVEHKDSIVFLHAVQS 797 LALAWAIAKHLIDVTRSFTLFATHYFELTQLPEIHPTAANVHLSAVEHKDSIVFLHAVQS Sbjct: 723 LALAWAIAKHLIDVTRSFTLFATHYFELTQLPEIHPTAANVHLSAVEHKDSIVFLHAVQS 782 Query: 798 GPASQSYGLQVAQLAGVPAPVIRAARKHLSALESQSMQPTPQFDLFSAPSFME--TQAET 855 GPASQSYGLQVAQLAGVPA VIRAARKHLSALESQSMQ TPQFDLFSAP+F TQ E Sbjct: 783 GPASQSYGLQVAQLAGVPAQVIRAARKHLSALESQSMQATPQFDLFSAPAFATPGTQDEP 842 Query: 856 EEADHERNPASAVEPDPLAQALLQSLDGIDPDALTPRQALDALYQLKALSRGQ 908 + AD ER+ + AVEPDPLAQALLQ+L IDPDALTPRQAL+ALYQLKAL Q Sbjct: 843 DPAD-ERSESDAVEPDPLAQALLQTLAQIDPDALTPRQALEALYQLKALQAPQ 894 >ref|YP_001352979.1| DNA mismatch repair protein MutS [Janthinobacterium sp. Marseille] sp|A6SXI2|MUTS_JANMA RecName: Full=DNA mismatch repair protein mutS gb|ABR88339.1| DNA mismatch repair protein [Janthinobacterium sp. Marseille] Length = 882 Score = 1322 bits (3421), Expect = 0.0, Method: Composition-based stats. Identities = 693/893 (77%), Positives = 775/893 (86%), Gaps = 23/893 (2%) Query: 16 SEEEVSRHTPMMQQYLRIKADHPNTLVFYRMGDFYELFFEDAEKASRLMGVTLTQRGSSN 75 + E +HTPMMQQYLRIKA++P TLVFYRMGDFYELFF+DAEKASRL+G+TLTQRG+SN Sbjct: 8 TPEGNEKHTPMMQQYLRIKAEYPTTLVFYRMGDFYELFFDDAEKASRLLGITLTQRGASN 67 Query: 76 GNPIKMAGVPFHSVEQYLARLIKLGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTDS 135 GNPIKMAGVPFH+V+QYL++L+KLGES+AICEQIGDPATSKGPVERKV+RV+TPGTLTDS Sbjct: 68 GNPIKMAGVPFHAVDQYLSKLVKLGESIAICEQIGDPATSKGPVERKVLRVITPGTLTDS 127 Query: 136 DLLPEKSERCLLAMQLLPSKSRKQMQVGLAWLSMASGALKMMEFTVESSLLDGRVKQELE 195 DLLPEKSE+ LLA L + RK +GLAWLSMASG LK+MEF ++ D R+K ELE Sbjct: 128 DLLPEKSEQPLLA--LYSTTQRKTATIGLAWLSMASGVLKLMEFATDAQNADVRLKHELE 185 Query: 196 RISAAEVLVADGQLEQCEPLLPNRAVTVPDWHFDQPSSEKALLDQLGVATLHGFGADGLG 255 RI+ AE+L+ + + TVPDWHFD KAL +QL V TL GFGA+ L Sbjct: 186 RIAPAEILLPGSVNDLFSEFSLAKNTTVPDWHFDIAHGTKALYEQLNVGTLTGFGAENLS 245 Query: 256 PAICAAGALLRYAQSTQGRGLQHVRTLTVESENEFIGLDAATRRNLELTETIRSQDANAL 315 AI AAGALLRYAQSTQG+GLQHVRTLTVE+ENEFIGLDAATRRNLELTETIR QDANA Sbjct: 246 AAIGAAGALLRYAQSTQGKGLQHVRTLTVETENEFIGLDAATRRNLELTETIRGQDANA- 304 Query: 316 APTLFSTLDHCRTAMGSRLLRHWLHHALRDQQVARERHAAINALMRTDACSGLSATLAAV 375 TLFS LDHCRTAMGSRLLRHWLHHA RDQ VA RHAAINALMR DACSGL++TLA+V Sbjct: 305 -ATLFSLLDHCRTAMGSRLLRHWLHHARRDQSVAMARHAAINALMRADACSGLASTLASV 363 Query: 376 PDIERITTRIALLSARPRDLAGLRSGLQQLGSLRAYVEMCARDAEAPLLGKLHEDLATPV 435 PD+ERITTRIALLSARPRDLAG+R GLQQL SLRAYV MC +DA+APLL +H+ LATP Sbjct: 364 PDVERITTRIALLSARPRDLAGMRGGLQQLPSLRAYVSMCNKDADAPLLKTIHDALATPS 423 Query: 436 ECLDLLERAIMLEPAAMVRDGGVIARGYDAELDELRGLSENAGQYLLELEARERERTGIA 495 +CLDL+ERAI +EPAAMVRDGGVIARG+DAELDELRGLSENAGQ+L++LE RER RTGI Sbjct: 424 DCLDLVERAIAMEPAAMVRDGGVIARGFDAELDELRGLSENAGQFLIDLETRERARTGIN 483 Query: 496 NLRVEYNKVHGFYIEVTHGQTDKVPEDYRRRQTLKNAERYIIPELKAFEDKALSAQERSL 555 NLRVEYNKVHGFYIEVTHGQTDKVP+DYRRRQTLKNAERYI PELKAFEDKALSAQER+L Sbjct: 484 NLRVEYNKVHGFYIEVTHGQTDKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQERAL 543 Query: 556 SREKFLYEQLLNDMGAHIVRLQSIAHALAQLDTLVALADHAVRNNWCAPQLVDEPCIQIE 615 +REK+LYEQ+L M HI LQ+IAHALAQLDTLVALA+HA+R+NWCAPQLV EP I IE Sbjct: 544 AREKYLYEQVLQQMTQHIATLQNIAHALAQLDTLVALAEHALRHNWCAPQLVSEPTITIE 603 Query: 616 QGRHPVVENQIERFIANDCQLAAERKLLLITGPNMGGKSTFMRQVALITLLAYVGSFVPA 675 QGRHPVVEN IERFIANDC L++E KLLLITGPNMGGKST+MRQVALITLLAYVGSFVPA Sbjct: 604 QGRHPVVENHIERFIANDCLLSSECKLLLITGPNMGGKSTYMRQVALITLLAYVGSFVPA 663 Query: 676 TSAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTESASILNNATEHSLVLMDEVGRGTSTF 735 +SAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTESA+ILN ATE+SLVLMDEVGRGTSTF Sbjct: 664 SSAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNGATENSLVLMDEVGRGTSTF 723 Query: 736 DGLALAWAIAKHLIDVTRSFTLFATHYFELTQLPEIHPTAANVHLSAVEHKDSIVFLHAV 795 DGLALAWAIAKHLID T+SFTLFATHYFELTQLPEIHPTAANVHLSAVEHKDSIVFLHAV Sbjct: 724 DGLALAWAIAKHLIDNTKSFTLFATHYFELTQLPEIHPTAANVHLSAVEHKDSIVFLHAV 783 Query: 796 QSGPASQSYGLQVAQLAGVPAPVIRAARKHLSALESQSMQPTPQFDLFS---APSFMETQ 852 Q+GPASQSYGLQVAQLAGVP PVIRAARKHL+ LE+ SMQ TPQFDLF+ +P+ +E+ Sbjct: 784 QAGPASQSYGLQVAQLAGVPQPVIRAARKHLALLEANSMQATPQFDLFAGGGSPTTVESA 843 Query: 853 AETEEADHERNPASAVEPDPLAQALLQSLDGIDPDALTPRQALDALYQLKALS 905 AE ++ ASAV+ +++ I+PDAL+PR+ALDALY+LK LS Sbjct: 844 AEPQQ-------ASAVD---------EAIAAINPDALSPREALDALYRLKELS 880 >sp|A4G717|MUTS_HERAR RecName: Full=DNA mismatch repair protein mutS emb|CAL62304.2| DNA mismatch repair protein MutS [Herminiimonas arsenicoxydans] Length = 893 Score = 1297 bits (3356), Expect = 0.0, Method: Composition-based stats. Identities = 683/884 (77%), Positives = 762/884 (86%), Gaps = 16/884 (1%) Query: 22 RHTPMMQQYLRIKADHPNTLVFYRMGDFYELFFEDAEKASRLMGVTLTQRGSSNGNPIKM 81 +HTPMMQQYLRIKA+HP TL+FYRMGDFYE+FFEDAEKASRL+G+TLTQRGSSNGNPIKM Sbjct: 20 KHTPMMQQYLRIKAEHPETLLFYRMGDFYEVFFEDAEKASRLLGITLTQRGSSNGNPIKM 79 Query: 82 AGVPFHSVEQYLARLIKLGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTDSDLLPEK 141 AGVPFH+V+QYL++L+KLGES+A+CEQIGDPATSKGPVERKV+RV+TPGTL+DSDLLPEK Sbjct: 80 AGVPFHAVDQYLSKLVKLGESIALCEQIGDPATSKGPVERKVLRVITPGTLSDSDLLPEK 139 Query: 142 SERCLLAMQLLPSKSRKQMQVGLAWLSMASGALKMMEFTVESSLLDGRVKQELERISAAE 201 SE+ LLA L + RK + +GLAWLSMASGALK+MEFT ++ R+K ELERI+ AE Sbjct: 140 SEQPLLA--LYSTTQRKTITIGLAWLSMASGALKLMEFTTDARNAATRLKHELERIAPAE 197 Query: 202 VLVADGQLEQCEPLLPNRAVTVPDWHFDQPSSEKALLDQLGVATLHGFGADGLGPAICAA 261 VL+ + TVPDWHFD KAL +QL V+TL GFGA+ L AI AA Sbjct: 198 VLLPGSIDGPDSDYAFAKNTTVPDWHFDIAHGSKALHEQLKVSTLTGFGAEHLNAAIGAA 257 Query: 262 GALLRYAQSTQGRGLQHVRTLTVESENEFIGLDAATRRNLELTETIRSQDANALAPTLFS 321 GALLRYAQ+TQG+GLQHVR LTVE+ENEFIGLDAATRRNLELTETIR QD N+ TLFS Sbjct: 258 GALLRYAQATQGKGLQHVRALTVETENEFIGLDAATRRNLELTETIRGQDNNS--ATLFS 315 Query: 322 TLDHCRTAMGSRLLRHWLHHALRDQQVARERHAAINALMRTDACSGLSATLAAVPDIERI 381 LDHCRTAMGSRLLRHWLHHA RDQ VAR RHAAINALMRTDAC+GL++TLA+VPD+ERI Sbjct: 316 LLDHCRTAMGSRLLRHWLHHARRDQAVARARHAAINALMRTDACTGLASTLASVPDVERI 375 Query: 382 TTRIALLSARPRDLAGLRSGLQQLGSLRAYVEMCARDAEAPLLGKLHEDLATPVECLDLL 441 TRIAL SARPRDLAG+R GLQQL SLRAYV MC +DA+APLL +H+ LATP ECLDL+ Sbjct: 376 ATRIALQSARPRDLAGMRGGLQQLPSLRAYVSMCNQDADAPLLKTIHDALATPSECLDLV 435 Query: 442 ERAIMLEPAAMVRDGGVIARGYDAELDELRGLSENAGQYLLELEARERERTGIANLRVEY 501 ERAI LEPAAMVRDGGVIARG+DAELDELRGLSENAGQ+L++LE RER RTGI NLRVEY Sbjct: 436 ERAIALEPAAMVRDGGVIARGFDAELDELRGLSENAGQFLVDLETRERTRTGINNLRVEY 495 Query: 502 NKVHGFYIEVTHGQTDKVPEDYRRRQTLKNAERYIIPELKAFEDKALSAQERSLSREKFL 561 NKVHGFYIEVTHGQTDKVP+DYRRRQTLKNAERYI PELKAFEDKALSAQER+L+REK+L Sbjct: 496 NKVHGFYIEVTHGQTDKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQERALAREKYL 555 Query: 562 YEQLLNDMGAHIVRLQSIAHALAQLDTLVALADHAVRNNWCAPQLVDEPCIQIEQGRHPV 621 Y+Q+L M HI LQ+IAHALAQLDTLVALA+HA+R+NWCAPQL+ EP I IEQGRHPV Sbjct: 556 YDQVLQQMAQHIGTLQNIAHALAQLDTLVALAEHALRHNWCAPQLIAEPTIAIEQGRHPV 615 Query: 622 VENQIERFIANDCQLAAERKLLLITGPNMGGKSTFMRQVALITLLAYVGSFVPATSAVIG 681 VEN IERFIANDC L E +LLLITGPNMGGKST+MRQVALITLLAYVGSFVPATSA IG Sbjct: 616 VENHIERFIANDCLLNNESRLLLITGPNMGGKSTYMRQVALITLLAYVGSFVPATSATIG 675 Query: 682 PIDRIFTRIGAADDLAGGRSTFMVEMTESASILNNATEHSLVLMDEVGRGTSTFDGLALA 741 PIDRIFTRIGAADDLAGGRSTFMVEMTESA+ILN ATE+SLVLMDEVGRGTSTFDGLALA Sbjct: 676 PIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNGATENSLVLMDEVGRGTSTFDGLALA 735 Query: 742 WAIAKHLIDVTRSFTLFATHYFELTQLPEIHPTAANVHLSAVEHKDSIVFLHAVQSGPAS 801 WAIA+HLID TRSFTLFATHYFELTQLPE+HP+AANVHLSAVEHKDSIVFLHAVQ+GPAS Sbjct: 736 WAIARHLIDSTRSFTLFATHYFELTQLPEVHPSAANVHLSAVEHKDSIVFLHAVQAGPAS 795 Query: 802 QSYGLQVAQLAGVPAPVIRAARKHLSALESQSMQPTPQFDLFSAPSFMETQAETEEADHE 861 QSYGLQVAQLAGVP VIRAARKHL+ LE+ SMQ TPQFDLF+ P + ++ E A Sbjct: 796 QSYGLQVAQLAGVPQAVIRAARKHLATLEANSMQATPQFDLFADPDHLIPTSDVETA--- 852 Query: 862 RNPASAVEPDPLAQALLQSLDGIDPDALTPRQALDALYQLKALS 905 +P L +AL I+PDAL+PR ALDALY+LK LS Sbjct: 853 -----MAQPSALDEALAD----INPDALSPRDALDALYRLKELS 887 >ref|YP_001100427.1| DNA mismatch repair protein MutS [Herminiimonas arsenicoxydans] Length = 870 Score = 1292 bits (3343), Expect = 0.0, Method: Composition-based stats. Identities = 680/880 (77%), Positives = 758/880 (86%), Gaps = 16/880 (1%) Query: 26 MMQQYLRIKADHPNTLVFYRMGDFYELFFEDAEKASRLMGVTLTQRGSSNGNPIKMAGVP 85 MMQQYLRIKA+HP TL+FYRMGDFYE+FFEDAEKASRL+G+TLTQRGSSNGNPIKMAGVP Sbjct: 1 MMQQYLRIKAEHPETLLFYRMGDFYEVFFEDAEKASRLLGITLTQRGSSNGNPIKMAGVP 60 Query: 86 FHSVEQYLARLIKLGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTDSDLLPEKSERC 145 FH+V+QYL++L+KLGES+A+CEQIGDPATSKGPVERKV+RV+TPGTL+DSDLLPEKSE+ Sbjct: 61 FHAVDQYLSKLVKLGESIALCEQIGDPATSKGPVERKVLRVITPGTLSDSDLLPEKSEQP 120 Query: 146 LLAMQLLPSKSRKQMQVGLAWLSMASGALKMMEFTVESSLLDGRVKQELERISAAEVLVA 205 LLA L + RK + +GLAWLSMASGALK+MEFT ++ R+K ELERI+ AEVL+ Sbjct: 121 LLA--LYSTTQRKTITIGLAWLSMASGALKLMEFTTDARNAATRLKHELERIAPAEVLLP 178 Query: 206 DGQLEQCEPLLPNRAVTVPDWHFDQPSSEKALLDQLGVATLHGFGADGLGPAICAAGALL 265 + TVPDWHFD KAL +QL V+TL GFGA+ L AI AAGALL Sbjct: 179 GSIDGPDSDYAFAKNTTVPDWHFDIAHGSKALHEQLKVSTLTGFGAEHLNAAIGAAGALL 238 Query: 266 RYAQSTQGRGLQHVRTLTVESENEFIGLDAATRRNLELTETIRSQDANALAPTLFSTLDH 325 RYAQ+TQG+GLQHVR LTVE+ENEFIGLDAATRRNLELTETIR QD N+ TLFS LDH Sbjct: 239 RYAQATQGKGLQHVRALTVETENEFIGLDAATRRNLELTETIRGQDNNS--ATLFSLLDH 296 Query: 326 CRTAMGSRLLRHWLHHALRDQQVARERHAAINALMRTDACSGLSATLAAVPDIERITTRI 385 CRTAMGSRLLRHWLHHA RDQ VAR RHAAINALMRTDAC+GL++TLA+VPD+ERI TRI Sbjct: 297 CRTAMGSRLLRHWLHHARRDQAVARARHAAINALMRTDACTGLASTLASVPDVERIATRI 356 Query: 386 ALLSARPRDLAGLRSGLQQLGSLRAYVEMCARDAEAPLLGKLHEDLATPVECLDLLERAI 445 AL SARPRDLAG+R GLQQL SLRAYV MC +DA+APLL +H+ LATP ECLDL+ERAI Sbjct: 357 ALQSARPRDLAGMRGGLQQLPSLRAYVSMCNQDADAPLLKTIHDALATPSECLDLVERAI 416 Query: 446 MLEPAAMVRDGGVIARGYDAELDELRGLSENAGQYLLELEARERERTGIANLRVEYNKVH 505 LEPAAMVRDGGVIARG+DAELDELRGLSENAGQ+L++LE RER RTGI NLRVEYNKVH Sbjct: 417 ALEPAAMVRDGGVIARGFDAELDELRGLSENAGQFLVDLETRERTRTGINNLRVEYNKVH 476 Query: 506 GFYIEVTHGQTDKVPEDYRRRQTLKNAERYIIPELKAFEDKALSAQERSLSREKFLYEQL 565 GFYIEVTHGQTDKVP+DYRRRQTLKNAERYI PELKAFEDKALSAQER+L+REK+LY+Q+ Sbjct: 477 GFYIEVTHGQTDKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQERALAREKYLYDQV 536 Query: 566 LNDMGAHIVRLQSIAHALAQLDTLVALADHAVRNNWCAPQLVDEPCIQIEQGRHPVVENQ 625 L M HI LQ+IAHALAQLDTLVALA+HA+R+NWCAPQL+ EP I IEQGRHPVVEN Sbjct: 537 LQQMAQHIGTLQNIAHALAQLDTLVALAEHALRHNWCAPQLIAEPTIAIEQGRHPVVENH 596 Query: 626 IERFIANDCQLAAERKLLLITGPNMGGKSTFMRQVALITLLAYVGSFVPATSAVIGPIDR 685 IERFIANDC L E +LLLITGPNMGGKST+MRQVALITLLAYVGSFVPATSA IGPIDR Sbjct: 597 IERFIANDCLLNNESRLLLITGPNMGGKSTYMRQVALITLLAYVGSFVPATSATIGPIDR 656 Query: 686 IFTRIGAADDLAGGRSTFMVEMTESASILNNATEHSLVLMDEVGRGTSTFDGLALAWAIA 745 IFTRIGAADDLAGGRSTFMVEMTESA+ILN ATE+SLVLMDEVGRGTSTFDGLALAWAIA Sbjct: 657 IFTRIGAADDLAGGRSTFMVEMTESAAILNGATENSLVLMDEVGRGTSTFDGLALAWAIA 716 Query: 746 KHLIDVTRSFTLFATHYFELTQLPEIHPTAANVHLSAVEHKDSIVFLHAVQSGPASQSYG 805 +HLID TRSFTLFATHYFELTQLPE+HP+AANVHLSAVEHKDSIVFLHAVQ+GPASQSYG Sbjct: 717 RHLIDSTRSFTLFATHYFELTQLPEVHPSAANVHLSAVEHKDSIVFLHAVQAGPASQSYG 776 Query: 806 LQVAQLAGVPAPVIRAARKHLSALESQSMQPTPQFDLFSAPSFMETQAETEEADHERNPA 865 LQVAQLAGVP VIRAARKHL+ LE+ SMQ TPQFDLF+ P + ++ E A Sbjct: 777 LQVAQLAGVPQAVIRAARKHLATLEANSMQATPQFDLFADPDHLIPTSDVETA------- 829 Query: 866 SAVEPDPLAQALLQSLDGIDPDALTPRQALDALYQLKALS 905 +P L +AL I+PDAL+PR ALDALY+LK LS Sbjct: 830 -MAQPSALDEALAD----INPDALSPRDALDALYRLKELS 864 >ref|YP_004752339.1| DNA mismatch repair protein MutS [Collimonas fungivorans Ter331] gb|AEK61516.1| DNA mismatch repair protein MutS [Collimonas fungivorans Ter331] Length = 880 Score = 1278 bits (3306), Expect = 0.0, Method: Composition-based stats. Identities = 677/885 (76%), Positives = 766/885 (86%), Gaps = 15/885 (1%) Query: 24 TPMMQQYLRIKADHPNTLVFYRMGDFYELFFEDAEKASRLMGVTLTQRGSSNGNPIKMAG 83 +P MQQYL IKAD+P+TLVFYRMGDFYELFF DAEKA+RL+G+TLT RG+ N PIKM G Sbjct: 9 SPGMQQYLGIKADYPDTLVFYRMGDFYELFFNDAEKAARLLGITLTARGTYNNAPIKMCG 68 Query: 84 VPFHSVEQYLARLIKLGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTDSDLLPEKSE 143 VPFHS +QYLA+LIKLGESVA+CEQIGDPATSKGPV+RKV+RV+TPGTLTDS+LLPEKS+ Sbjct: 69 VPFHSADQYLAKLIKLGESVALCEQIGDPATSKGPVDRKVLRVITPGTLTDSNLLPEKSD 128 Query: 144 RCLLAMQLLPSKSRKQMQVGLAWLSMASGALKMMEFTVESSLLDGRVKQELERISAAEVL 203 + LLA+ + ++ RK ++VGLAWLSMASGALKMMEF E++ LD +KQELERI+ AE+L Sbjct: 129 QPLLALYV--TQQRKAVKVGLAWLSMASGALKMMEFACEAATLDTLLKQELERIAPAEIL 186 Query: 204 VADGQLEQCEPLLPNRAVTVPDWHFDQPSSEKALLDQLGVATLHGFGADGLGPAICAAGA 263 AD + ++A TVP+WHFD + +KALLDQL V++L GFGA+GL AI AAGA Sbjct: 187 AADMVETMWSSAVVDKATTVPEWHFDIANGQKALLDQLAVSSLGGFGAEGLSAAIGAAGA 246 Query: 264 LLRYAQSTQGRGLQHVRTLTVESENEFIGLDAATRRNLELTETIRSQDANALAPTLFSTL 323 LLRYAQSTQG+GLQHVRTLTVE+ENEFIGLDAATRRNLELTETIR QDA++ APTLFS L Sbjct: 247 LLRYAQSTQGKGLQHVRTLTVETENEFIGLDAATRRNLELTETIRGQDASSGAPTLFSLL 306 Query: 324 DHCRTAMGSRLLRHWLHHALRDQQVARERHAAINALMRTDACSGLSATLAAVPDIERITT 383 DHCRTAMGSRLLRHWLHHA RDQ VAR RHAAI AL+ DA S +S+TL+AVPDIERIT Sbjct: 307 DHCRTAMGSRLLRHWLHHAKRDQAVARGRHAAIGALIAADAGSAISSTLSAVPDIERITA 366 Query: 384 RIALLSARPRDLAGLRSGLQQLGSLRAYVEMCARDAEAPLLGKLHEDLATPVECLDLLER 443 RIALLSARPRDLAGLR GL QL SLRA + MC + +APLL +L L TPV+CL LL+ Sbjct: 367 RIALLSARPRDLAGLRDGLLQLDSLRADIAMCGSENQAPLLQELQSALETPVDCLQLLQT 426 Query: 444 AIMLEPAAMVRDGGVIARGYDAELDELRGLSENAGQYLLELEARERERTGIANLRVEYNK 503 +I EP+ MVRDGGVIA G+DAELDELRGLSENAGQ+L++LE RER RTGIANLRVEYNK Sbjct: 427 SIAAEPSTMVRDGGVIAPGFDAELDELRGLSENAGQFLVDLETRERARTGIANLRVEYNK 486 Query: 504 VHGFYIEVTHGQTDKVPEDYRRRQTLKNAERYIIPELKAFEDKALSAQERSLSREKFLYE 563 VHGFYIEVTHGQT KVP+DYRRRQTLKNAERYI PELKAFEDKALSAQER+L REK LY+ Sbjct: 487 VHGFYIEVTHGQTTKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQERALIREKALYD 546 Query: 564 QLLNDMGAHIVRLQSIAHALAQLDTLVALADHAVRNNWCAPQLVDEPCIQIEQGRHPVVE 623 Q+L D+ HI LQ+IAHALAQLDTLVALADHA R++WC P+LV+EP IQI QGRHPVVE Sbjct: 547 QILQDLAPHIGTLQNIAHALAQLDTLVALADHAARHDWCVPRLVNEPAIQIVQGRHPVVE 606 Query: 624 NQIERFIANDCQLAAERKLLLITGPNMGGKSTFMRQVALITLLAYVGSFVPATSAVIGPI 683 QIERFIANDCQL+ ERKLLLITGPNMGGKSTFMRQVALITLLAYVGS+VPA SAV+GPI Sbjct: 607 KQIERFIANDCQLSPERKLLLITGPNMGGKSTFMRQVALITLLAYVGSYVPADSAVLGPI 666 Query: 684 DRIFTRIGAADDLAGGRSTFMVEMTESASILNNATEHSLVLMDEVGRGTSTFDGLALAWA 743 DRIFTRIGAADDLAGGRSTFMVEMTESA+ILN A+E+SLVLMDEVGRGTSTFDGLALAWA Sbjct: 667 DRIFTRIGAADDLAGGRSTFMVEMTESAAILNGASENSLVLMDEVGRGTSTFDGLALAWA 726 Query: 744 IAKHLIDVTRSFTLFATHYFELTQLPEIHPTAANVHLSAVEHKDSIVFLHAVQSGPASQS 803 IA+HLID TRSFTLFATHYFELTQLP++HP+AANVHLSAVEHKDSIVFLHAVQ+GPASQS Sbjct: 727 IARHLIDATRSFTLFATHYFELTQLPDLHPSAANVHLSAVEHKDSIVFLHAVQAGPASQS 786 Query: 804 YGLQVAQLAGVPAPVIRAARKHLSALESQSMQPTPQFDLFSAPSFMETQAETEEADHERN 863 YGLQVAQLAGVPAPVIRAARKHL+ LESQS+QPTPQFDLF+ QA + +AD E Sbjct: 787 YGLQVAQLAGVPAPVIRAARKHLALLESQSVQPTPQFDLFA-------QAASMDAD-ETG 838 Query: 864 PASAVEPDPLAQALLQSLDGIDPDALTPRQALDALYQLKALSRGQ 908 + AV+ + LL +LD IDPD LTPR+AL+ LY+LK LS GQ Sbjct: 839 GSEAVDSE-----LLIALDSIDPDTLTPREALEQLYRLKHLSSGQ 878