BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4057.p (332 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004684996.1| hydrolase alpha/beta fold family protein [Cu... 364 1e-98 emb|CCA86082.1| putative phage integrase [Ralstonia syzygii R24] 359 4e-97 ref|ZP_02388082.1| integrative genetic element Gsu32, integrase,... 353 2e-95 ref|YP_442444.1| integrative genetic element Gsu32, integrase [B... 353 2e-95 ref|ZP_03794499.1| integrase family protein [Burkholderia pseudo... 353 3e-95 >ref|YP_004684996.1| hydrolase alpha/beta fold family protein [Cupriavidus necator N-1] gb|AEI76515.1| hydrolase alpha/beta fold family [Cupriavidus necator N-1] Length = 426 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 182/317 (57%), Positives = 227/317 (71%) Query: 10 VAEVCRFYLEGHIRVNRMDKGYREVKRTFDTMLGEFGDRAAISVSRRDAFAFLQQFLHIP 69 V +CR YLEGH+ NR KG +E++R FDTML D V+R AF L ++HIP Sbjct: 108 VRRLCRNYLEGHVERNRALKGAKEIRRMFDTMLDPIADMLPQQVTRSVAFELLNSYMHIP 167 Query: 70 VQGANLRRELGAAWSYSLDAGNLPDDTPNFWRDIMRGQFRSRGHQVRGEYRGTDKRVLSD 129 VQ LR ELGAAW Y LDAG LPDDTPN+WR IMRG+F+SRG ++ G+ G KRVL++ Sbjct: 168 VQAGRLRSELGAAWDYGLDAGKLPDDTPNWWRQIMRGRFQSRGKKIEGKSVGEVKRVLTE 227 Query: 130 AELALLIPWLPNFTGTNEDILTMYLWTCARGTEICQIHESEVSEEADGWWWTIPKAKTKN 189 +E+ LI WLPNF+ D L +YLWT RG+EI + +E+SEE DG WWTIPKAKTKN Sbjct: 228 SEVGELIRWLPNFSRIVADALALYLWTGTRGSEIVSMEAAEISEEEDGLWWTIPKAKTKN 287 Query: 190 RRQGGATDHRIPLVGRALTIVKRRLQDPVNGYLFTGRKGEVWEQKNVGVAVHYHRPENES 249 ++ GATD R+PL G+A IV+RRL GYLF R G EQK + AV YH+P +++ Sbjct: 288 AKRQGATDLRVPLFGQAEQIVRRRLAIAGKGYLFPSRVGGPTEQKTIQTAVFYHQPYSKT 347 Query: 250 RPEAVRKRLPVSGWAPHDLRRTSRTLLAAMGCPEDIAEMILGHMLEGVRGIYNRHKYDKE 309 RPE R RL V+ WAPHDLRRT RTLLA+MGCP ++AE +LGHML GV+G+YNRH YD+E Sbjct: 348 RPEDQRPRLTVARWAPHDLRRTVRTLLASMGCPTEVAESVLGHMLPGVQGVYNRHTYDRE 407 Query: 310 RREWLTRLSERLEQIAA 326 R EWL +LSE+LE +AA Sbjct: 408 RHEWLGKLSEKLESLAA 424 >emb|CCA86082.1| putative phage integrase [Ralstonia syzygii R24] Length = 427 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 178/319 (55%), Positives = 224/319 (70%) Query: 9 SVAEVCRFYLEGHIRVNRMDKGYREVKRTFDTMLGEFGDRAAISVSRRDAFAFLQQFLHI 68 +V+++C+ YL GH+ NR KG REV+RTFD MLG+ +V+R AF L + HI Sbjct: 108 TVSQLCKDYLVGHVERNRAIKGAREVRRTFDMMLGKLASMRPEAVTRAQAFDLLNSYAHI 167 Query: 69 PVQGANLRRELGAAWSYSLDAGNLPDDTPNFWRDIMRGQFRSRGHQVRGEYRGTDKRVLS 128 PVQ + LR ELGAAW Y D+G L +D PN+WR IMRG+ RS G ++ GE G KRVL+ Sbjct: 168 PVQASKLRTELGAAWDYGHDSGRLSEDVPNWWRQIMRGRLRSVGKRIHGEPIGKVKRVLT 227 Query: 129 DAELALLIPWLPNFTGTNEDILTMYLWTCARGTEICQIHESEVSEEADGWWWTIPKAKTK 188 D E LI WLPNF+ +D+ TMYLWT RG +I +I E++EE DG WWTIPK KTK Sbjct: 228 DQEAGALIRWLPNFSALVDDVCTMYLWTATRGDDIVEIRVEEITEEEDGLWWTIPKIKTK 287 Query: 189 NRRQGGATDHRIPLVGRALTIVKRRLQDPVNGYLFTGRKGEVWEQKNVGVAVHYHRPENE 248 + A+DHR+PLVGRA +V+RR+ +G+LF R+ EQK + VAV +H+P + Sbjct: 288 IAKNDNASDHRVPLVGRAAAVVRRRMAIAKDGWLFPSRRSGPTEQKTIQVAVWHHQPYCK 347 Query: 249 SRPEAVRKRLPVSGWAPHDLRRTSRTLLAAMGCPEDIAEMILGHMLEGVRGIYNRHKYDK 308 SRPE R RLPV+ WAPHDLRRT+RT+L A+GCP D+AE ILGHML GV GIYNRH YD+ Sbjct: 348 SRPELDRPRLPVANWAPHDLRRTARTMLTALGCPTDVAESILGHMLPGVEGIYNRHTYDR 407 Query: 309 ERREWLTRLSERLEQIAAG 327 ERREWLTRL LE +AAG Sbjct: 408 ERREWLTRLDAHLEALAAG 426 >ref|ZP_02388082.1| integrative genetic element Gsu32, integrase, putative [Burkholderia thailandensis Bt4] ref|ZP_02456377.1| integrative genetic element Gsu32, integrase, putative [Burkholderia pseudomallei 9] ref|ZP_05586909.1| integrase family protein [Burkholderia thailandensis E264] Length = 339 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 177/314 (56%), Positives = 221/314 (70%) Query: 9 SVAEVCRFYLEGHIRVNRMDKGYREVKRTFDTMLGEFGDRAAISVSRRDAFAFLQQFLHI 68 +V ++C YL GH+ NR KG EV R F TMLG+ D A+ V+R AF+ + + H+ Sbjct: 9 TVRDICSAYLTGHVERNRQSKGAAEVARMFRTMLGDIADLPAVEVTRERAFSKIDSYRHV 68 Query: 69 PVQGANLRRELGAAWSYSLDAGNLPDDTPNFWRDIMRGQFRSRGHQVRGEYRGTDKRVLS 128 PVQ + LR ELGAAW Y+LDAG LP+ N+WR IMRG+ RS G +++G+ GT KR L+ Sbjct: 69 PVQASRLRLELGAAWDYALDAGRLPESASNWWRQIMRGRLRSNGRRIQGQPMGTAKRFLT 128 Query: 129 DAELALLIPWLPNFTGTNEDILTMYLWTCARGTEICQIHESEVSEEADGWWWTIPKAKTK 188 DAE+ LI WLPNF+ ED LT+YLWT RG EIC + +E++EE DG WWTIPK KTK Sbjct: 129 DAEVGALITWLPNFSRNVEDALTLYLWTGTRGAEICAMEGTEITEERDGLWWTIPKVKTK 188 Query: 189 NRRQGGATDHRIPLVGRALTIVKRRLQDPVNGYLFTGRKGEVWEQKNVGVAVHYHRPENE 248 + R ATD R+PLVGRA IV+RRL+ G+LF +G +QK G AVH H P + Sbjct: 189 SARHEKATDLRVPLVGRADAIVRRRLERYGKGWLFPAERGGHMQQKVFGQAVHCHMPYSV 248 Query: 249 SRPEAVRKRLPVSGWAPHDLRRTSRTLLAAMGCPEDIAEMILGHMLEGVRGIYNRHKYDK 308 +RPE R RLPV+ WAPHDLRRT+RT+LAA+GCP +I E ILGHML GV GIYNRH YD Sbjct: 249 TRPEQERPRLPVTHWAPHDLRRTARTILAALGCPYEIGEAILGHMLPGVGGIYNRHSYDA 308 Query: 309 ERREWLTRLSERLE 322 ERR WLT+L E+LE Sbjct: 309 ERRHWLTKLDEKLE 322 >ref|YP_442444.1| integrative genetic element Gsu32, integrase [Burkholderia thailandensis E264] gb|ABC39126.1| integrative genetic element Gsu32, integrase, putative [Burkholderia thailandensis E264] Length = 433 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 177/314 (56%), Positives = 221/314 (70%) Query: 9 SVAEVCRFYLEGHIRVNRMDKGYREVKRTFDTMLGEFGDRAAISVSRRDAFAFLQQFLHI 68 +V ++C YL GH+ NR KG EV R F TMLG+ D A+ V+R AF+ + + H+ Sbjct: 103 TVRDICSAYLTGHVERNRQSKGAAEVARMFRTMLGDIADLPAVEVTRERAFSKIDSYRHV 162 Query: 69 PVQGANLRRELGAAWSYSLDAGNLPDDTPNFWRDIMRGQFRSRGHQVRGEYRGTDKRVLS 128 PVQ + LR ELGAAW Y+LDAG LP+ N+WR IMRG+ RS G +++G+ GT KR L+ Sbjct: 163 PVQASRLRLELGAAWDYALDAGRLPESASNWWRQIMRGRLRSNGRRIQGQPMGTAKRFLT 222 Query: 129 DAELALLIPWLPNFTGTNEDILTMYLWTCARGTEICQIHESEVSEEADGWWWTIPKAKTK 188 DAE+ LI WLPNF+ ED LT+YLWT RG EIC + +E++EE DG WWTIPK KTK Sbjct: 223 DAEVGALITWLPNFSRNVEDALTLYLWTGTRGAEICAMEGTEITEERDGLWWTIPKVKTK 282 Query: 189 NRRQGGATDHRIPLVGRALTIVKRRLQDPVNGYLFTGRKGEVWEQKNVGVAVHYHRPENE 248 + R ATD R+PLVGRA IV+RRL+ G+LF +G +QK G AVH H P + Sbjct: 283 SARHEKATDLRVPLVGRADAIVRRRLERYGKGWLFPAERGGHMQQKVFGQAVHCHMPYSV 342 Query: 249 SRPEAVRKRLPVSGWAPHDLRRTSRTLLAAMGCPEDIAEMILGHMLEGVRGIYNRHKYDK 308 +RPE R RLPV+ WAPHDLRRT+RT+LAA+GCP +I E ILGHML GV GIYNRH YD Sbjct: 343 TRPEQERPRLPVTHWAPHDLRRTARTILAALGCPYEIGEAILGHMLPGVGGIYNRHSYDA 402 Query: 309 ERREWLTRLSERLE 322 ERR WLT+L E+LE Sbjct: 403 ERRHWLTKLDEKLE 416 >ref|ZP_03794499.1| integrase family protein [Burkholderia pseudomallei Pakistan 9] ref|YP_002897427.1| integrase family protein [Burkholderia pseudomallei MSHR346] gb|EEH25060.1| integrase family protein [Burkholderia pseudomallei Pakistan 9] gb|ACQ95427.1| integrase family protein [Burkholderia pseudomallei MSHR346] Length = 433 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 177/314 (56%), Positives = 221/314 (70%) Query: 9 SVAEVCRFYLEGHIRVNRMDKGYREVKRTFDTMLGEFGDRAAISVSRRDAFAFLQQFLHI 68 +V ++C YL GH+ NR KG EV R F TMLG+ D A+ V+R AF+ + + H+ Sbjct: 103 TVRDICSAYLTGHVERNRQSKGAAEVARMFRTMLGDIADLPAVEVTRERAFSKIDSYRHV 162 Query: 69 PVQGANLRRELGAAWSYSLDAGNLPDDTPNFWRDIMRGQFRSRGHQVRGEYRGTDKRVLS 128 PVQ + LR ELGAAW Y+LDAG LP+ N+WR IMRG+ RS G +++G+ GT KR L+ Sbjct: 163 PVQASRLRLELGAAWDYALDAGRLPESASNWWRQIMRGRLRSNGRRIQGQPMGTAKRFLT 222 Query: 129 DAELALLIPWLPNFTGTNEDILTMYLWTCARGTEICQIHESEVSEEADGWWWTIPKAKTK 188 DAE+ LI WLPNF+ ED LT+YLWT RG EIC + +E++EE DG WWTIPK KTK Sbjct: 223 DAEVGALITWLPNFSRNVEDALTLYLWTGTRGAEICAMEGTEITEERDGLWWTIPKVKTK 282 Query: 189 NRRQGGATDHRIPLVGRALTIVKRRLQDPVNGYLFTGRKGEVWEQKNVGVAVHYHRPENE 248 + R ATD R+PLVGRA IV+RRL+ G+LF +G +QK G AVH H P + Sbjct: 283 SARHEKATDLRVPLVGRADAIVRRRLERYGKGWLFPAERGGHMQQKVFGQAVHCHMPYSV 342 Query: 249 SRPEAVRKRLPVSGWAPHDLRRTSRTLLAAMGCPEDIAEMILGHMLEGVRGIYNRHKYDK 308 +RPE R RLPV+ WAPHDLRRT+RT+LAA+GCP +I E ILGHML GV GIYNRH YD Sbjct: 343 TRPEQERPRLPVTHWAPHDLRRTARTILAALGCPYEIGEAILGHMLPGVGGIYNRHSYDA 402 Query: 309 ERREWLTRLSERLE 322 ERR WLT+L E+LE Sbjct: 403 ERRHWLTKLDEKLE 416