BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4037.p (435 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02359374.1| phage major capsid protein, HK97 family [Burk... 374 e-101 ref|ZP_02371644.1| phage major capsid protein, HK97 family [Burk... 372 e-101 ref|YP_495930.1| Phage major capsid protein, HK97 [Novosphingobi... 372 e-101 ref|ZP_04520259.1| phage major capsid protein, HK97 family [Burk... 370 e-100 ref|NP_945035.1| gp5 [Burkholderia phage phi1026b] >gi|76811214|... 367 2e-99 >ref|ZP_02359374.1| phage major capsid protein, HK97 family [Burkholderia oklahomensis EO147] Length = 420 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 219/395 (55%), Positives = 273/395 (69%), Gaps = 13/395 (3%) Query: 51 EPIMKELKRIGDQVKEVGEKALKEAEKAGQVSQDTKKAADELLLKQGELQARLQEVEQKL 110 E + KELKRIGD+VK GEKAL EA+KAG + +TK DELL+KQGELQARL E EQKL Sbjct: 27 ETVTKELKRIGDEVKSAGEKALAEAKKAGDLGAETKATVDELLIKQGELQARLLEAEQKL 86 Query: 111 DKHTTGPASVEF-KSIGGQVVESDELKEYVKEGNFKKSITIQV--KAVTSAANSVGAAV- 166 + + G A E K++G V ES+E+K +G+ +KS+ ++V K++ + +VGA V Sbjct: 87 AR-SGGSAEPEVPKTLGQLVTESEEMKGM--DGSARKSVRVRVDRKSIMNVPATVGAGVS 143 Query: 167 ------APDRLAGIVTLPQQRLTVRDLLSPGRTSSNLIQYIKETGFVNNAAMVAEGTKKP 220 A DR AGI+ PQ+++T+R+LL PG+TSS+ I+Y ETGF NNAA VAEG +KP Sbjct: 144 GSNSLVAADRQAGIIAPPQRQMTIRNLLMPGQTSSSSIEYTVETGFTNNAATVAEGAQKP 203 Query: 221 ESSITMTEAQSVVAKIAHFIKASSEIMSDFPALQSIIDTRLRYGLALIEEAQLLKGSGVG 280 S +T V IAH KAS +I+ D PALQS ID R RYGL L EE QLLKG G G Sbjct: 204 TSDLTFNLKNQPVRTIAHLFKASRQILDDAPALQSYIDGRARYGLQLAEENQLLKGDGTG 263 Query: 281 NNLNGIYTQASQYAAPILITNPTRIDVLRLALLQAELAEYPSTGIVLNPADWTAIELQKD 340 N+ GI QAS +A I +TN T ID +RLALLQA LAE+P+TGIVLNP DW +IEL KD Sbjct: 264 ANILGILPQASAFAPSITLTNATSIDRIRLALLQAVLAEFPATGIVLNPIDWASIELTKD 323 Query: 341 STGAYIFANPQSTAQPGLWGRPVVTTKSMTVDEFLVGAFKMGAQIFDREQASVTIATQNE 400 + G YI NP + P LW PVV T++MT +EFLVGAF M AQIFDR + V ++T+N Sbjct: 324 AQGRYIVGNPVNGTTPRLWNLPVVETQAMTANEFLVGAFSMAAQIFDRMEIEVLLSTENV 383 Query: 401 DDFVKNLVTILAEERLALADYRPEAFVKGDLTSVA 435 DDF KN+V+I AEERLALA YRPE+FV G L A Sbjct: 384 DDFEKNMVSIRAEERLALAVYRPESFVTGSLAEKA 418 >ref|ZP_02371644.1| phage major capsid protein, HK97 family [Burkholderia thailandensis TXDOH] Length = 420 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 216/394 (54%), Positives = 269/394 (68%), Gaps = 11/394 (2%) Query: 51 EPIMKELKRIGDQVKEVGEKALKEAEKAGQVSQDTKKAADELLLKQGELQARLQEVEQKL 110 E + KELKRIGD+VK GEKAL EA+KAG + +TK DELL+KQGELQARL E EQKL Sbjct: 27 ETVTKELKRIGDEVKSAGEKALAEAKKAGDLGAETKATVDELLIKQGELQARLLEAEQKL 86 Query: 111 DKHTTGPASVEFKSIGGQVVESDELKEYVKEGNFKKSITIQV--KAVTSAANSVGAAV-- 166 + K++G V ES+E+K +G+ +KS+ ++V K++ + +VGA V Sbjct: 87 ARGGGSAEPEVPKTLGQLVTESEEMKGM--DGSARKSVRVRVDRKSIMNVPATVGAGVSG 144 Query: 167 -----APDRLAGIVTLPQQRLTVRDLLSPGRTSSNLIQYIKETGFVNNAAMVAEGTKKPE 221 A DR AGI+ PQ+++T+R+LL PG+TSS+ I+Y ETGF NNAA VAEG +KP Sbjct: 145 SNSLVAADRQAGIIAPPQRQMTIRNLLMPGQTSSSSIEYTVETGFTNNAATVAEGAQKPT 204 Query: 222 SSITMTEAQSVVAKIAHFIKASSEIMSDFPALQSIIDTRLRYGLALIEEAQLLKGSGVGN 281 S +T V IAH KAS +I+ D PALQS ID R RYGL L EE QLLKG G G Sbjct: 205 SDLTFNLKNQPVRTIAHLFKASRQILDDAPALQSYIDGRARYGLQLAEENQLLKGDGTGA 264 Query: 282 NLNGIYTQASQYAAPILITNPTRIDVLRLALLQAELAEYPSTGIVLNPADWTAIELQKDS 341 N+ GI QAS +A I +TN T ID +RLALLQA LAE+P+TGIVLNP DW +IEL KD+ Sbjct: 265 NILGILPQASAFAPSITLTNATPIDRIRLALLQAVLAEFPATGIVLNPIDWASIELTKDA 324 Query: 342 TGAYIFANPQSTAQPGLWGRPVVTTKSMTVDEFLVGAFKMGAQIFDREQASVTIATQNED 401 G YI NP + P LW PVV T++MT +EFLVGAF M AQIFDR + V ++T+N D Sbjct: 325 QGRYIVGNPVNGTTPRLWNLPVVETQAMTANEFLVGAFSMAAQIFDRMEIEVLLSTENVD 384 Query: 402 DFVKNLVTILAEERLALADYRPEAFVKGDLTSVA 435 DF KN+V+I AEERLALA YRPE+FV G L A Sbjct: 385 DFEKNMVSIRAEERLALAVYRPESFVTGSLAEKA 418 >ref|YP_495930.1| Phage major capsid protein, HK97 [Novosphingobium aromaticivorans DSM 12444] gb|ABD25096.1| Phage major capsid protein, HK97 [Novosphingobium aromaticivorans DSM 12444] Length = 465 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 208/396 (52%), Positives = 273/396 (68%), Gaps = 11/396 (2%) Query: 47 EGDPEPIMKELKRIGDQVKEVGEKALKEAEKAGQVSQDTKKAADELLLKQGELQARLQEV 106 EG+ + + +LK DQVK EKA E ++ G V+++TKK+ADE L+K E AR+ + Sbjct: 66 EGELKQLAVDLKSATDQVKTFAEKADAEMKRLGTVTEETKKSADEALIKMNETTARIDAI 125 Query: 107 EQKLDKHTTGPASVEFKSIGGQVVESDELKEYVKEGNFKKSITIQVKAV-----TSAANS 161 EQKL + K+ G +V ES+E K ++ GN K + ++QVKA+ T A S Sbjct: 126 EQKLARRGEEGEKRRAKTAGQEVTESEEFKAWLG-GNRKNTFSMQVKAIISSLTTDADGS 184 Query: 162 VGAAVAPDRLAGIVTLPQQRLTVRDLLSPGRTSSNLIQYIKETGFVNNAAMVAE--GTKK 219 G + P R GI+ LPQ+R+T+RDLL+PG T SN IQY+KETGF NNAA V E GT K Sbjct: 185 AGDLIVPQRQPGIIGLPQRRMTIRDLLTPGNTGSNAIQYVKETGFTNNAATVTETAGTAK 244 Query: 220 PESSITMTEAQSVVAKIAHFIKASSEIMSDFPALQSIIDTRLRYGLALIEEAQLLKGSGV 279 P+S I S V IAH++ A+ +I+ D P L+S ID RLRYGL +EE QLL G G Sbjct: 245 PQSEIKFDIVTSSVTTIAHWVLATKQILDDVPQLRSYIDGRLRYGLEYVEEGQLLNGGGT 304 Query: 280 GNNLNGIYTQASQYAAPILITNP---TRIDVLRLALLQAELAEYPSTGIVLNPADWTAIE 336 G +LNGIYTQA+ +AAPI T T+ID++RLA+LQA LAE P+ GIV++P+DW IE Sbjct: 305 GTDLNGIYTQATAFAAPITPTAAGMMTKIDIIRLAILQAALAELPANGIVMHPSDWADIE 364 Query: 337 LQKDSTGAYIFANPQSTAQPGLWGRPVVTTKSMTVDEFLVGAFKMGAQIFDREQASVTIA 396 L K GAY+FANPQ ++ LW PVV T++MTVD+FL GAF+MGAQ+FDRE+A+V I+ Sbjct: 365 LTKTDDGAYLFANPQGGSEARLWRLPVVETQAMTVDKFLTGAFQMGAQVFDREEANVEIS 424 Query: 397 TQNEDDFVKNLVTILAEERLALADYRPEAFVKGDLT 432 T++ D+F KNLVTI AEERLALA YRPEAF+KGD + Sbjct: 425 TEDSDNFRKNLVTIRAEERLALAVYRPEAFIKGDFS 460 >ref|ZP_04520259.1| phage major capsid protein, HK97 family [Burkholderia pseudomallei MSHR346] gb|EEP49173.1| phage major capsid protein, HK97 family [Burkholderia pseudomallei MSHR346] Length = 418 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 219/395 (55%), Positives = 272/395 (68%), Gaps = 13/395 (3%) Query: 51 EPIMKELKRIGDQVKEVGEKALKEAEKAGQVSQDTKKAADELLLKQGELQARLQEVEQKL 110 E + KELKRIGD+VK GEKAL EA+KAG + +TK DELL+KQGELQARL E EQKL Sbjct: 25 ETVTKELKRIGDEVKSAGEKALAEAKKAGDLGAETKATVDELLVKQGELQARLLEAEQKL 84 Query: 111 DKHTTGPASVEF-KSIGGQVVESDELKEYVKEGNFKKSITIQV--KAVTSAANSVGAAV- 166 + + G A E K++G V ES+E+K +G+ +KS+ ++V K++ + +VGA V Sbjct: 85 AR-SGGSAEPEVPKTLGQLVTESEEMKGM--DGSARKSVRVRVDRKSIMNVPATVGAGVS 141 Query: 167 ------APDRLAGIVTLPQQRLTVRDLLSPGRTSSNLIQYIKETGFVNNAAMVAEGTKKP 220 A DR AGIV PQ+++T+R+LL PG+TSS+ I+Y ETGF NNAA VAE +KP Sbjct: 142 GSNSLVAADRQAGIVAPPQRQMTIRNLLMPGQTSSSSIEYTVETGFTNNAATVAESAQKP 201 Query: 221 ESSITMTEAQSVVAKIAHFIKASSEIMSDFPALQSIIDTRLRYGLALIEEAQLLKGSGVG 280 S +T V IAH KAS +I+ D PALQS ID R RYGL L EE QLLKG G G Sbjct: 202 TSDLTFNLKNQPVRTIAHLFKASRQILDDAPALQSYIDGRARYGLQLAEENQLLKGDGTG 261 Query: 281 NNLNGIYTQASQYAAPILITNPTRIDVLRLALLQAELAEYPSTGIVLNPADWTAIELQKD 340 N+ GI QAS +A I +TN T ID +RLALLQA LAE+P+TGIVLNP DW +IEL KD Sbjct: 262 ANILGILPQASAFAPFITLTNATPIDKIRLALLQAVLAEFPATGIVLNPIDWASIELTKD 321 Query: 341 STGAYIFANPQSTAQPGLWGRPVVTTKSMTVDEFLVGAFKMGAQIFDREQASVTIATQNE 400 + G YI NP + P LW PVV T++MT +EFLVGAF M AQIFDR + V ++T+N Sbjct: 322 AQGRYIVGNPVNGTTPRLWNLPVVETQAMTANEFLVGAFSMAAQIFDRMEIEVLLSTENV 381 Query: 401 DDFVKNLVTILAEERLALADYRPEAFVKGDLTSVA 435 DDF KN+V+I AEERLALA YRPE+FV G L A Sbjct: 382 DDFEKNMVSIRAEERLALAVYRPESFVTGSLAEKA 416 >ref|NP_945035.1| gp5 [Burkholderia phage phi1026b] ref|YP_333085.1| HK97 family phage major capsid protein [Burkholderia pseudomallei 1710b] ref|ZP_04951285.1| phage major capsid protein, HK97 family [Burkholderia pseudomallei 1710a] gb|AAR23156.1| gp5 [Burkholderia phage phi1026b] gb|ABA50142.1| phage major capsid protein, HK97 family [Burkholderia pseudomallei 1710b] gb|EET08304.1| phage major capsid protein, HK97 family [Burkholderia pseudomallei 1710a] Length = 418 Score = 367 bits (943), Expect = 2e-99, Method: Composition-based stats. Identities = 214/395 (54%), Positives = 270/395 (68%), Gaps = 13/395 (3%) Query: 51 EPIMKELKRIGDQVKEVGEKALKEAEKAGQVSQDTKKAADELLLKQGELQARLQEVEQKL 110 E + KELKRIGD+VK GEKAL EA++AG + +TK DELL+KQGELQARL E EQKL Sbjct: 25 ETVTKELKRIGDEVKSAGEKALAEAKRAGDLGVETKATVDELLIKQGELQARLLEAEQKL 84 Query: 111 DKHTTGPASVEF-KSIGGQVVESDELKEYVKEGNFKKSITIQV--KAVTSAANSVGAAVA 167 + G A +E K++G V ES+E+K +G+ +KS+ ++V K++ + +VG+ V+ Sbjct: 85 AR-GGGSAELETPKTLGQLVTESEEMKGM--DGSARKSVRVRVDRKSIMNVPATVGSGVS 141 Query: 168 -------PDRLAGIVTLPQQRLTVRDLLSPGRTSSNLIQYIKETGFVNNAAMVAEGTKKP 220 DR AGI+ PQ+++T+RDLL PG+TSS+ I+Y ETGF NNAA VAEG +KP Sbjct: 142 GSNSLVVADRQAGIIAPPQRKMTIRDLLMPGQTSSSSIEYTVETGFTNNAAAVAEGAQKP 201 Query: 221 ESSITMTEAQSVVAKIAHFIKASSEIMSDFPALQSIIDTRLRYGLALIEEAQLLKGSGVG 280 S + V IAH KAS +I+ D PALQS ID R RYGL L EE Q+LKG G G Sbjct: 202 TSDLKFNLKNQPVRTIAHLFKASRQILDDAPALQSYIDGRARYGLQLTEEGQILKGDGTG 261 Query: 281 NNLNGIYTQASQYAAPILITNPTRIDVLRLALLQAELAEYPSTGIVLNPADWTAIELQKD 340 N+ GI QAS + I + N T ID +RLALLQA LAE+P+TGIVLNP DW +IEL KD Sbjct: 262 ANILGILPQASAFMPSITLANATPIDKIRLALLQAVLAEFPATGIVLNPIDWASIELTKD 321 Query: 341 STGAYIFANPQSTAQPGLWGRPVVTTKSMTVDEFLVGAFKMGAQIFDREQASVTIATQNE 400 S G YI NP + P LW PVV T++MT +EFLVGAF M AQIFDR + V ++T+N Sbjct: 322 SQGRYIVGNPVNGTTPRLWNLPVVETQAMTANEFLVGAFSMAAQIFDRMEIEVLLSTENV 381 Query: 401 DDFVKNLVTILAEERLALADYRPEAFVKGDLTSVA 435 DDF KN+V+I AEERLALA YRPE+FV G L A Sbjct: 382 DDFEKNMVSIRAEERLALAVYRPESFVTGALVEQA 416