BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4033.p (109 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004700708.1| hypothetical protein PPS_1253 [Pseudomonas p... 112 3e-23 ref|NP_746004.1| hypothetical protein PP_3874 [Pseudomonas putid... 111 3e-23 ref|NP_700382.1| hypothetical protein sb9 [Salmonella phage ST64... 92 4e-17 ref|YP_002244032.1| phage protein [Salmonella enterica subsp. en... 91 6e-17 ref|ZP_02663885.1| putative phage head-tail adaptor [Salmonella ... 90 9e-17 >ref|YP_004700708.1| hypothetical protein PPS_1253 [Pseudomonas putida S16] gb|AEJ11828.1| conserved hypothetical protein [Pseudomonas putida S16] Length = 124 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 57/105 (54%), Positives = 73/105 (69%) Query: 5 EPMAGELNRRIEIRHRQDLPLADAELSHEFGGQRRRWAKIEPVGAATYAGSVQIEEKVTH 64 EP +GEL+RRI IR R+DLP+ DA+L F R RWAKI VG A Y SVQ ++K+TH Sbjct: 9 EPESGELDRRITIRLREDLPVEDADLDAVFTQPRHRWAKIRAVGTAVYTDSVQTDDKITH 68 Query: 65 RIFLRRILGITTDHEIVHGDQVYRVRRSMAMNGAPRFTLLEVEEL 109 R+++R + GITT HE+V G +YRV+R RFTL+EVEEL Sbjct: 69 RVWVRLLGGITTSHEVVAGGAIYRVKRCAPWGAGKRFTLIEVEEL 113 >ref|NP_746004.1| hypothetical protein PP_3874 [Pseudomonas putida KT2440] gb|AAN69468.1|AE016582_6 hypothetical protein PP_3874 [Pseudomonas putida KT2440] Length = 124 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 56/105 (53%), Positives = 74/105 (70%) Query: 5 EPMAGELNRRIEIRHRQDLPLADAELSHEFGGQRRRWAKIEPVGAATYAGSVQIEEKVTH 64 EP +GEL+RRI IR R+DLP+ DA+L F R RWAKI VG A Y SVQ ++K+TH Sbjct: 9 EPESGELDRRITIRLREDLPVDDADLDAVFTQPRHRWAKIRAVGTAVYTDSVQTDDKITH 68 Query: 65 RIFLRRILGITTDHEIVHGDQVYRVRRSMAMNGAPRFTLLEVEEL 109 R+++R + G+TT HE+V G ++YRV+R RFTL+EVEEL Sbjct: 69 RMWVRLLGGVTTSHEVVAGGKIYRVKRCAPWGAGKRFTLIEVEEL 113 >ref|NP_700382.1| hypothetical protein sb9 [Salmonella phage ST64B] ref|ZP_02574691.1| putative phage head-tail adaptor [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gb|AAL25888.1| Sb9 [Salmonella phage ST64B] gb|EDZ15150.1| putative phage head-tail adaptor [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] emb|CBG25007.1| phage protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gb|ACY88895.1| hypothetical protein STM14_2445 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] emb|CBW18041.1| predicted bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gb|ADX17723.1| putative phage head-tail adaptor [Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74] gb|AEF07890.1| hypothetical protein STMUK_1997 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 134 Score = 91.7 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 51/104 (49%), Positives = 64/104 (61%) Query: 6 PMAGELNRRIEIRHRQDLPLADAELSHEFGGQRRRWAKIEPVGAATYAGSVQIEEKVTHR 65 P GEL++RI IR R D+P D ++ + Q R WAK GAA Y GSVQIE +VTH Sbjct: 15 PDPGELDQRIVIRRRVDVPADDFGVTPTYPEQIRTWAKKAQPGAAAYQGSVQIENRVTHY 74 Query: 66 IFLRRILGITTDHEIVHGDQVYRVRRSMAMNGAPRFTLLEVEEL 109 +R GIT DHE++H D YRV+R +NG RF L+E E L Sbjct: 75 FTIRFRRGITADHEVLHDDISYRVKRVRDLNGKRRFLLIECEAL 118 >ref|YP_002244032.1| phage protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] emb|CAR33517.1| phage protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 134 Score = 90.9 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 51/104 (49%), Positives = 64/104 (61%) Query: 6 PMAGELNRRIEIRHRQDLPLADAELSHEFGGQRRRWAKIEPVGAATYAGSVQIEEKVTHR 65 P GEL++RI IR R D+P D ++ + Q R WAK GAA Y G+VQIE +VTH Sbjct: 15 PDPGELDQRIVIRRRVDVPADDFGVTPTYPEQIRAWAKKAQPGAAAYQGAVQIENRVTHY 74 Query: 66 IFLRRILGITTDHEIVHGDQVYRVRRSMAMNGAPRFTLLEVEEL 109 +R GIT DHE++H D YRV+R +N RF LLE EEL Sbjct: 75 FTIRFRRGITADHEVLHDDISYRVKRVRDLNSKRRFLLLECEEL 118 >ref|ZP_02663885.1| putative phage head-tail adaptor [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] ref|YP_002115122.1| putative phage head-tail adaptor [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gb|ACF92306.1| putative phage head-tail adaptor [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gb|EDY27824.1| putative phage head-tail adaptor [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 134 Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 51/104 (49%), Positives = 63/104 (60%) Query: 6 PMAGELNRRIEIRHRQDLPLADAELSHEFGGQRRRWAKIEPVGAATYAGSVQIEEKVTHR 65 P GEL++RI IR R D+P D ++ + Q R WAK GAA Y GSVQIE +VTH Sbjct: 15 PDPGELDQRIVIRRRVDVPADDFGVTPTYPEQIRTWAKKAQPGAAAYQGSVQIENRVTHY 74 Query: 66 IFLRRILGITTDHEIVHGDQVYRVRRSMAMNGAPRFTLLEVEEL 109 +R GIT DHE++H D YRV+R +N RF LLE E L Sbjct: 75 FTIRFRRGITADHEVLHDDISYRVKRVRDLNSKRRFLLLECEAL 118