BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4029.p (496 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004700712.1| bacteriophage Mu tail sheath [Pseudomonas pu... 543 e-152 ref|NP_745999.1| phage sheath protein [Pseudomonas putida KT2440... 540 e-151 ref|ZP_05637178.1| bacteriophage Mu tail sheath [Pseudomonas syr... 538 e-151 ref|ZP_06456539.1| bacteriophage Mu tail sheath [Pseudomonas syr... 538 e-150 ref|YP_237663.1| bacteriophage Mu tail sheath [Pseudomonas syrin... 538 e-150 >ref|YP_004700712.1| bacteriophage Mu tail sheath [Pseudomonas putida S16] gb|AEJ11832.1| bacteriophage Mu tail sheath [Pseudomonas putida S16] Length = 495 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 291/496 (58%), Positives = 366/496 (73%), Gaps = 2/496 (0%) Query: 1 MTVPFNNTPADANVPLFYGEMDNSMANSATSTLRRLLIAQVNEDQELL-VNQLQPMARVS 59 M V FN P+D VPLFY E+DNS ANSA+ +L RLL+ QVN+D + + +L ++ +S Sbjct: 1 MAVSFNTIPSDLRVPLFYAEVDNSQANSASGSLLRLLVGQVNDDADAPEIGKLTLVSDLS 60 Query: 60 DAVALGGAGSMLATMYTAWRKSDPAGEVWVLPVKLVTGTAAAGKVAFAGIATEGGVLNLY 119 A +GG GSMLA MY WR+ D GEVW LP+K TGT A GKVA G T GG +NLY Sbjct: 61 LAKTIGGVGSMLADMYETWRRIDLVGEVWCLPIK-ATGTKATGKVAITGTTTAGGQINLY 119 Query: 120 VGATRVRATVVTGQTAAESAAAMAAAINAASLPVKAAAAAGEVTLTCRWKGETGNDIRLA 179 VG RVRATV +G +AA A A+AAA+NAA L V A A G+VTLTCRW G +GNDI+L Sbjct: 120 VGGQRVRATVASGASAAAVATALAAAVNAAGLGVSATTATGDVTLTCRWSGLSGNDIQLE 179 Query: 180 MNFKGTSANEKTPAGLTVTLTNLTGGTGSPDLVSLLALVGDEPFEFICHPYSDSASLDDF 239 +N +G S E TPAGL VT+T + GG GSPD+ L+++GDEPFEFIC P++D+ SLD + Sbjct: 180 LNRQGRSNGEMTPAGLVVTVTAMAGGVGSPDVAEALSVLGDEPFEFICAPWTDATSLDAW 239 Query: 240 KEWMNDSSGRWSFAQQLWGHVYTGRRGTMGQLSAFGKVRNDAHMTIEGFEPTKPDLIWDD 299 K +M+DSSGRWS+++QL+GHVY+ RGT+G+L A G RND HMT+ GFEP PD +W Sbjct: 240 KGFMDDSSGRWSWSRQLYGHVYSACRGTLGELVALGSARNDPHMTVYGFEPECPDPVWRQ 299 Query: 300 VAAYTARQAAFISADPARPTQTGELVGSTPAPSGERFVYQERNALLKNGIATQKYAGSAV 359 A+Y AR A FISADPARPTQTGEL G TPAPSG+RF ER +LL +GIAT +G A Sbjct: 300 AASYAARTAVFISADPARPTQTGELNGITPAPSGDRFTLTERQSLLTHGIATGYSSGGAQ 359 Query: 360 QIERARTTYQRNSYGQPDDSYYDSETMHISGTVMRRLQSIITSKYGRHKLANDGTKYGPG 419 +IER TTYQ+N+ GQPD+S+ DSET+H S ++ L+ +TSKYGRHKLA+DGT++G G Sbjct: 360 RIERGITTYQQNALGQPDNSFLDSETLHQSAYIINFLKGRVTSKYGRHKLADDGTRFGAG 419 Query: 420 DAIVTPSVIRNELIGEYQRMETDGLVENSALFAKYLIVERDANNPNRLNVLFPPDYVNQL 479 AIVTP+VIR ELI Y +E+ G+ EN+ LFAKYL+VER A +P RL+VL+PPD VNQL Sbjct: 420 QAIVTPNVIRAELIAGYYVLESMGITENAELFAKYLVVERSATDPTRLDVLYPPDLVNQL 479 Query: 480 RIFALLNQFRLQYAET 495 R+ AL QFRLQYA + Sbjct: 480 RVLALQYQFRLQYAAS 495 >ref|NP_745999.1| phage sheath protein [Pseudomonas putida KT2440] gb|AAN69463.1|AE016582_1 phage sheath protein, putative [Pseudomonas putida KT2440] Length = 495 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 293/496 (59%), Positives = 367/496 (73%), Gaps = 2/496 (0%) Query: 1 MTVPFNNTPADANVPLFYGEMDNSMANSATSTLRRLLIAQVNEDQELL-VNQLQPMARVS 59 MTV FN+ P+D VPLFY E+DNS ANSAT +L RL++ QVN+D + + +L + +S Sbjct: 1 MTVSFNSIPSDLRVPLFYAEVDNSQANSATGSLLRLIVGQVNDDADAPEIGKLTLVPSLS 60 Query: 60 DAVALGGAGSMLATMYTAWRKSDPAGEVWVLPVKLVTGTAAAGKVAFAGIATEGGVLNLY 119 A +GG GSMLA MY WR D GEVW LP+K TGT AAGKV G ATEGG +NLY Sbjct: 61 LAKTIGGVGSMLADMYETWRGIDLVGEVWCLPLK-ATGTKAAGKVTITGTATEGGQVNLY 119 Query: 120 VGATRVRATVVTGQTAAESAAAMAAAINAASLPVKAAAAAGEVTLTCRWKGETGNDIRLA 179 +G RVRATV +G +AA A A+AAA+NAA L V A AA GEV LTCRW G +GNDI+L Sbjct: 120 IGGQRVRATVASGASAAAVATALAAAVNAAGLGVSATAATGEVALTCRWSGLSGNDIQLE 179 Query: 180 MNFKGTSANEKTPAGLTVTLTNLTGGTGSPDLVSLLALVGDEPFEFICHPYSDSASLDDF 239 +N +G S E TPAGLTVT+T +TGG G+PD+ LA++GDEPFEFIC P++D+ SLD + Sbjct: 180 LNRQGRSNGELTPAGLTVTVTAMTGGVGTPDVAEALAVLGDEPFEFICAPWADATSLDAW 239 Query: 240 KEWMNDSSGRWSFAQQLWGHVYTGRRGTMGQLSAFGKVRNDAHMTIEGFEPTKPDLIWDD 299 K +M+D+SGRWS+A+QL+GHVY+ RGT+G+L A G RND H+T+ GFEP PD +W Sbjct: 240 KGFMDDTSGRWSWARQLYGHVYSACRGTLGELVALGDTRNDQHVTVYGFEPECPDPVWRQ 299 Query: 300 VAAYTARQAAFISADPARPTQTGELVGSTPAPSGERFVYQERNALLKNGIATQKYAGSAV 359 A Y +R A FISADPARPTQTGEL G TPAPSG+RF+ ER +LL +GIAT +G Sbjct: 300 AAGYASRTAVFISADPARPTQTGELNGITPAPSGDRFMLTERQSLLTHGIATGYSSGGVQ 359 Query: 360 QIERARTTYQRNSYGQPDDSYYDSETMHISGTVMRRLQSIITSKYGRHKLANDGTKYGPG 419 +IER TTY++N+ GQPD+S+ DSET+H S ++ L+ ITSKYGRHKLA+DGT++G G Sbjct: 360 RIERGITTYRQNALGQPDNSFLDSETLHQSAYIINFLKGRITSKYGRHKLADDGTRFGAG 419 Query: 420 DAIVTPSVIRNELIGEYQRMETDGLVENSALFAKYLIVERDANNPNRLNVLFPPDYVNQL 479 AIVTP+VIR ELI Y +ET G+ EN+ LFAKYLIVER +P R+NVL+PPD VNQL Sbjct: 420 QAIVTPNVIRAELIAGYYVLETLGIAENADLFAKYLIVERSTTDPARVNVLYPPDLVNQL 479 Query: 480 RIFALLNQFRLQYAET 495 R+ AL Q RLQYA + Sbjct: 480 RVLALQYQPRLQYAAS 495 >ref|ZP_05637178.1| bacteriophage Mu tail sheath [Pseudomonas syringae pv. tabaci ATCC 11528] gb|EGH91685.1| bacteriophage Mu tail sheath [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 498 Score = 538 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 284/498 (57%), Positives = 368/498 (73%), Gaps = 2/498 (0%) Query: 1 MTVPFNNTPADANVPLFYGEMDNSMANSATSTLRRLLIAQVNED-QELLVNQLQPMARVS 59 M + FNN P+D VPLFY EMDNS ANSA++++RRL++AQVN+D + L + V+ Sbjct: 1 MAISFNNIPSDVRVPLFYAEMDNSAANSASASMRRLIVAQVNDDVSGPELGSLVLVPSVA 60 Query: 60 DAVALGGAGSMLATMYTAWRKSDPAGEVWVLPVKLVTGTAAAGKVAFAGIATEGGVLNLY 119 A +GG GSMLA+MY WRK+DP GEVW LP+ G A KV +G ATE G+LNLY Sbjct: 61 LAKNIGGQGSMLASMYETWRKADPTGEVWCLPLLNTEGAKAGAKVTLSGAATEAGLLNLY 120 Query: 120 VGATRVRATVVTGQTAAESAAAMAAAINAA-SLPVKAAAAAGEVTLTCRWKGETGNDIRL 178 VG RV+ATVV G TAA++A A++ INA LPV AA AG +TL+C+W G +GNDI+L Sbjct: 121 VGGMRVQATVVNGATAAQAATALSVKINATPDLPVTAAVEAGVLTLSCKWSGASGNDIQL 180 Query: 179 AMNFKGTSANEKTPAGLTVTLTNLTGGTGSPDLVSLLALVGDEPFEFICHPYSDSASLDD 238 N +G + E PAGLT +T +TGG G+PD + LA +GDEPFEFIC P++D+A+LD Sbjct: 181 EFNRQGKTNGEVIPAGLTAAVTAMTGGVGTPDQLKALAALGDEPFEFICMPWTDTATLDA 240 Query: 239 FKEWMNDSSGRWSFAQQLWGHVYTGRRGTMGQLSAFGKVRNDAHMTIEGFEPTKPDLIWD 298 +K M+DS+GRWS+A+QL+GHVY+ +RGT+G L A G++RND H+T++G E P +W Sbjct: 241 WKAAMDDSTGRWSWARQLYGHVYSAKRGTVGTLVAAGQLRNDQHITLQGVENGVPQPVWL 300 Query: 299 DVAAYTARQAAFISADPARPTQTGELVGSTPAPSGERFVYQERNALLKNGIATQKYAGSA 358 AA AR A FISAD +RPTQ+G + G PAP+ +RF ER +LL+ GIAT Y G Sbjct: 301 QAAALAARTAVFISADASRPTQSGTMPGIDPAPASQRFTLTERESLLRYGIATAYYEGGY 360 Query: 359 VQIERARTTYQRNSYGQPDDSYYDSETMHISGTVMRRLQSIITSKYGRHKLANDGTKYGP 418 V+I+R+ TTYQ+N+YGQ D+SY DSETMH S ++RRLQ IITSKYGRHKLANDGT++G Sbjct: 361 VRIQRSITTYQKNAYGQADNSYLDSETMHQSAFIIRRLQGIITSKYGRHKLANDGTRFGA 420 Query: 419 GDAIVTPSVIRNELIGEYQRMETDGLVENSALFAKYLIVERDANNPNRLNVLFPPDYVNQ 478 G I+TPS IR ELI +Y R+E +G VEN+ FA++LIVERD N+P+R+NV+FPPDY+N Sbjct: 421 GQPIITPSTIRGELIAQYARLEEEGHVENAETFAQHLIVERDGNDPSRVNVMFPPDYING 480 Query: 479 LRIFALLNQFRLQYAETA 496 LR+FALLNQFRLQY E A Sbjct: 481 LRVFALLNQFRLQYDEAA 498 >ref|ZP_06456539.1| bacteriophage Mu tail sheath [Pseudomonas syringae pv. aesculi str. NCPPB3681] gb|EGH03230.1| bacteriophage Mu tail sheath [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 498 Score = 538 bits (1386), Expect = e-150, Method: Composition-based stats. Identities = 283/498 (56%), Positives = 369/498 (74%), Gaps = 2/498 (0%) Query: 1 MTVPFNNTPADANVPLFYGEMDNSMANSATSTLRRLLIAQVNED-QELLVNQLQPMARVS 59 M + FNN P+D VPLFY EMDNS ANSA++++RRL++AQVN+D + L + V+ Sbjct: 1 MAISFNNIPSDVRVPLFYAEMDNSAANSASASMRRLIVAQVNDDVSGPELGSLVLVPSVA 60 Query: 60 DAVALGGAGSMLATMYTAWRKSDPAGEVWVLPVKLVTGTAAAGKVAFAGIATEGGVLNLY 119 A +GG GSMLA+MY WRK+DP GEVW LP+ G A KV +G ATE G+LNLY Sbjct: 61 LAKNIGGQGSMLASMYETWRKADPTGEVWCLPLLNTEGAKAGAKVTLSGAATEAGLLNLY 120 Query: 120 VGATRVRATVVTGQTAAESAAAMAAAINAA-SLPVKAAAAAGEVTLTCRWKGETGNDIRL 178 VG RV+ATVV G TAA++A A++ INA LP+ AA AG +TL+C+W G +GNDI+L Sbjct: 121 VGGMRVQATVVNGATAAQAATALSVKINATPDLPITAAVEAGVLTLSCKWSGASGNDIQL 180 Query: 179 AMNFKGTSANEKTPAGLTVTLTNLTGGTGSPDLVSLLALVGDEPFEFICHPYSDSASLDD 238 N +G + E PAGLT +T +TGG G+PD + LA +GDEPFEFIC P++D+A+LD Sbjct: 181 EFNRQGKTNGEVIPAGLTAAVTAMTGGVGTPDQLKALAALGDEPFEFICMPWTDTATLDA 240 Query: 239 FKEWMNDSSGRWSFAQQLWGHVYTGRRGTMGQLSAFGKVRNDAHMTIEGFEPTKPDLIWD 298 +K M+DS+GRWS+A+QL+GHVY+ +RGT+G L A G++RND H+T++G E P +W Sbjct: 241 WKAAMDDSTGRWSWARQLYGHVYSAKRGTVGTLVAAGQLRNDQHITLQGVENGVPQPVWL 300 Query: 299 DVAAYTARQAAFISADPARPTQTGELVGSTPAPSGERFVYQERNALLKNGIATQKYAGSA 358 AA AR A FISAD +RPTQ+G + G PAP+ +RF ER +LL+ GIAT Y G Sbjct: 301 QAAALAARTAVFISADASRPTQSGTMPGIDPAPASQRFTLTERESLLRYGIATAYYEGGY 360 Query: 359 VQIERARTTYQRNSYGQPDDSYYDSETMHISGTVMRRLQSIITSKYGRHKLANDGTKYGP 418 V+I+R+ TTYQ+N+YGQ D+SY DSETMH S ++RRLQ IITSKYGRHKLANDGT++G Sbjct: 361 VRIQRSITTYQKNAYGQADNSYLDSETMHQSAFIIRRLQGIITSKYGRHKLANDGTRFGA 420 Query: 419 GDAIVTPSVIRNELIGEYQRMETDGLVENSALFAKYLIVERDANNPNRLNVLFPPDYVNQ 478 G I+TPS IR ELI +Y R+E +G VEN+ FA++LIVERD+N+P+R+NV+FPPDY+N Sbjct: 421 GQPIITPSTIRGELIAQYARLEEEGHVENAETFAQHLIVERDSNDPSRVNVMFPPDYING 480 Query: 479 LRIFALLNQFRLQYAETA 496 LR+FALLNQFRLQY E A Sbjct: 481 LRVFALLNQFRLQYDEAA 498 >ref|YP_237663.1| bacteriophage Mu tail sheath [Pseudomonas syringae pv. syringae B728a] gb|AAY39625.1| Bacteriophage Mu tail sheath [Pseudomonas syringae pv. syringae B728a] Length = 498 Score = 538 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 282/498 (56%), Positives = 368/498 (73%), Gaps = 2/498 (0%) Query: 1 MTVPFNNTPADANVPLFYGEMDNSMANSATSTLRRLLIAQVNED-QELLVNQLQPMARVS 59 M + FNN P+D VPLFY EMDNS ANSA++++RRL++AQVN+D + L + V+ Sbjct: 1 MAISFNNIPSDVRVPLFYAEMDNSAANSASASMRRLIVAQVNDDVSGPELGSLVLVPSVA 60 Query: 60 DAVALGGAGSMLATMYTAWRKSDPAGEVWVLPVKLVTGTAAAGKVAFAGIATEGGVLNLY 119 A +GG GSMLA+MY WRK+DP GEVW LP+ G A KV G ATE G+LNLY Sbjct: 61 LAKNIGGQGSMLASMYETWRKADPTGEVWCLPLLNTEGAKAGAKVTLTGAATEAGLLNLY 120 Query: 120 VGATRVRATVVTGQTAAESAAAMAAAINAA-SLPVKAAAAAGEVTLTCRWKGETGNDIRL 178 VG RV+ATVV G TAA++A A++ INA LP+ AA AG +TL+C+W G +GNDI+L Sbjct: 121 VGGMRVQATVVNGATAAQAATALSVKINATPDLPITAAVEAGVLTLSCKWSGASGNDIQL 180 Query: 179 AMNFKGTSANEKTPAGLTVTLTNLTGGTGSPDLVSLLALVGDEPFEFICHPYSDSASLDD 238 N +G + E PAGLT ++ +TGG G+PD + +LA +GDEPFEFIC P++D+A+LD Sbjct: 181 EFNRQGKTNGEVIPAGLTAAVSAMTGGVGTPDQLKVLAALGDEPFEFICMPWTDTATLDA 240 Query: 239 FKEWMNDSSGRWSFAQQLWGHVYTGRRGTMGQLSAFGKVRNDAHMTIEGFEPTKPDLIWD 298 +K M+DS+GRWS+A+QL+GHVY+ +RGT+G L A G++RND H+T++G E P +W Sbjct: 241 WKAAMDDSTGRWSWARQLYGHVYSAKRGTVGTLVAAGQLRNDQHITLQGVENGVPQPVWL 300 Query: 299 DVAAYTARQAAFISADPARPTQTGELVGSTPAPSGERFVYQERNALLKNGIATQKYAGSA 358 AA AR A FISAD +RPTQ+G + G PAP+ +RF ER +LL+ GIAT Y G Sbjct: 301 QAAALAARTAVFISADASRPTQSGTMPGIDPAPASQRFTLTERESLLRYGIATAYYEGGY 360 Query: 359 VQIERARTTYQRNSYGQPDDSYYDSETMHISGTVMRRLQSIITSKYGRHKLANDGTKYGP 418 V+I+R+ TTYQ+N+YGQ D+SY DSETMH S ++RRLQ IITSKYGRHKLANDGT++G Sbjct: 361 VRIQRSITTYQKNAYGQADNSYLDSETMHQSAFIIRRLQGIITSKYGRHKLANDGTRFGA 420 Query: 419 GDAIVTPSVIRNELIGEYQRMETDGLVENSALFAKYLIVERDANNPNRLNVLFPPDYVNQ 478 G I+TPS IR ELI +Y R+E +G VEN+ FA++LIVERD N+P+R+NV+FPPDY+N Sbjct: 421 GQPIITPSTIRGELIAQYARLEEEGHVENAETFAQHLIVERDGNDPSRVNVMFPPDYING 480 Query: 479 LRIFALLNQFRLQYAETA 496 LR+FALLNQFRLQY E A Sbjct: 481 LRVFALLNQFRLQYDEAA 498