BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4023.p (182 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002330174.1| predicted baseplate assembly protein [Escher... 116 1e-24 ref|YP_003363888.1| phage base plate assembly protein [Citrobact... 116 2e-24 gb|AEJ56043.1| phage baseplate assembly protein V family protein... 115 2e-24 ref|ZP_05637184.1| Phage baseplate assembly protein V [Pseudomon... 108 3e-22 ref|ZP_07266224.1| Phage baseplate assembly protein V [Pseudomon... 108 4e-22 >ref|YP_002330174.1| predicted baseplate assembly protein [Escherichia coli O127:H6 str. E2348/69] emb|CAS10223.1| predicted baseplate assembly protein [Escherichia coli O127:H6 str. E2348/69] Length = 217 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 58/110 (52%), Positives = 76/110 (69%) Query: 22 QRMQVSILDGESKDDVELFEQYGITSIPLSGAGGLALFFDGDRSHAAVIMPSDKRYRPTD 81 Q +Q++ L GE D E F+ YG+T+ P G+ G+A+ +G+ SH V+ YR T+ Sbjct: 35 QLLQLNGLAGEQLDGAEYFQHYGLTTSPPPGSMGIAVPLNGNTSHTVVVATEHGAYRLTE 94 Query: 82 LKPGEVAIYTHEGARIVMKEGRIIEVECDVYRVKAKRYEVVAEEAVSIAT 131 LKPGEVA+YT EGA+IV+K GR+IE ECDVYRVK KRYEV AEE + T Sbjct: 95 LKPGEVALYTDEGAKIVLKRGRVIETECDVYRVKCKRYEVEAEENATFTT 144 >ref|YP_003363888.1| phage base plate assembly protein [Citrobacter rodentium ICC168] emb|CBG87025.1| putative phage base plate assembly protein [Citrobacter rodentium ICC168] Length = 216 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 58/110 (52%), Positives = 76/110 (69%) Query: 22 QRMQVSILDGESKDDVELFEQYGITSIPLSGAGGLALFFDGDRSHAAVIMPSDKRYRPTD 81 Q +Q++ L GE D E F+ YG+T+ P G+ G+A+ +G+ SH V+ YR T+ Sbjct: 34 QLLQLNGLAGEQLDGAEYFQHYGLTTSPPPGSMGIAVPLNGNTSHTVVVATEHGAYRLTE 93 Query: 82 LKPGEVAIYTHEGARIVMKEGRIIEVECDVYRVKAKRYEVVAEEAVSIAT 131 LKPGEVA+YT EGA+IV+K GR+IE ECDVYRVK KRYEV AEE + T Sbjct: 94 LKPGEVALYTDEGAKIVLKRGRVIETECDVYRVKCKRYEVEAEENATFTT 143 >gb|AEJ56043.1| phage baseplate assembly protein V family protein [Escherichia coli UMNF18] Length = 217 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 56/110 (50%), Positives = 77/110 (70%) Query: 22 QRMQVSILDGESKDDVELFEQYGITSIPLSGAGGLALFFDGDRSHAAVIMPSDKRYRPTD 81 Q +Q++ L GE D E F+ YG+T+ P G+ G+A+ +G+ SH V+ YR T+ Sbjct: 35 QLLQLNGLAGEQLDGAEYFQHYGLTTSPPPGSMGIAVPLNGNTSHTVVVATEHGAYRLTE 94 Query: 82 LKPGEVAIYTHEGARIVMKEGRIIEVECDVYRVKAKRYEVVAEEAVSIAT 131 LKPGEVA+YT EGA+IV+K GR++E +CDVYRVK KRYEV AEE+ + T Sbjct: 95 LKPGEVALYTDEGAKIVLKRGRVVETDCDVYRVKCKRYEVEAEESAAFTT 144 >ref|ZP_05637184.1| Phage baseplate assembly protein V [Pseudomonas syringae pv. tabaci ATCC 11528] gb|EFW81973.1| Phage baseplate assembly protein V [Pseudomonas syringae pv. glycinea str. B076] gb|EFW87957.1| Phage baseplate assembly protein V [Pseudomonas syringae pv. glycinea str. race 4] gb|EGH16290.1| Phage baseplate assembly protein V [Pseudomonas syringae pv. glycinea str. race 4] gb|EGH23896.1| Phage baseplate assembly protein V [Pseudomonas syringae pv. mori str. 301020] gb|EGH91679.1| Phage baseplate assembly protein V [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 170 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 67/177 (37%), Positives = 97/177 (54%), Gaps = 15/177 (8%) Query: 7 IARCTVVLTKPGQRRQRMQVSILDGESKDDVELFEQYGITSIPLSGAGGLALFFDGDRSH 66 + R TVVL + + Q +Q+ + GE KDD+E FE YG TS PL+GA G+A F GDRSH Sbjct: 8 LVRGTVVLARASSKMQALQMRLTAGEVKDDMEHFEPYGFTSNPLAGAEGIAAFIGGDRSH 67 Query: 67 AAVIMPSDKRYRPTDLKPGEVAIYTHEGARIVMKEGRIIEVECDVYRVKAKRYEVVAEEA 126 +++ +D+RYR L+ GEVAIYT EG +I +K G++I++E D +KA A Sbjct: 68 GLLLVVADRRYRLKGLESGEVAIYTDEGDKIHLKRGKVIDIETDTLNIKA---------A 118 Query: 127 VSIATGDFELAASGTAESTGPIKMPEVIVDNVPLSKHFHQE-HDGPPTSSPKAGGGG 182 V++ ++ +G S G + + + H H G S P AGG G Sbjct: 119 VAVNFDTPQITQTGKIVSKG-----DQLAAGISQISHLHGGVQAGNGQSGPPAGGAG 170 >ref|ZP_07266224.1| Phage baseplate assembly protein V [Pseudomonas syringae pv. syringae 642] gb|EGH42033.1| Phage baseplate assembly protein V [Pseudomonas syringae pv. pisi str. 1704B] gb|EGH79032.1| Phage baseplate assembly protein V [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 170 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 66/177 (37%), Positives = 96/177 (54%), Gaps = 15/177 (8%) Query: 7 IARCTVVLTKPGQRRQRMQVSILDGESKDDVELFEQYGITSIPLSGAGGLALFFDGDRSH 66 + R TVVL + + Q +Q+ + GE KDD+E FE YG TS PL+GA G+A F GDRSH Sbjct: 8 LVRGTVVLARASSKMQALQMRLTAGEVKDDMEHFEPYGFTSNPLAGAEGIAAFIGGDRSH 67 Query: 67 AAVIMPSDKRYRPTDLKPGEVAIYTHEGARIVMKEGRIIEVECDVYRVKAKRYEVVAEEA 126 +++ +D+RYR L+ GEVAIYT EG +I +K G++I++E D +KA A Sbjct: 68 GLLLVVADRRYRLKGLESGEVAIYTDEGDKIHLKRGKVIDIETDTLNIKA---------A 118 Query: 127 VSIATGDFELAASGTAESTGPIKMPEVIVDNVPLSKHFHQE-HDGPPTSSPKAGGGG 182 V++ ++ +G S G + + + H H G S P GG G Sbjct: 119 VAVNFDTPQITQTGKIVSQG-----DQLAAGISQISHLHGNVQGGNGQSGPPVGGAG 170