BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4021.p (348 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_258355.1| baseplate J family protein [Pseudomonas fluores... 307 2e-81 ref|YP_004352293.1| phage tail protein; baseplate J-like protein... 291 1e-76 gb|ACH86143.1| tail protein [Pseudomonas phage DVM-2008] 290 2e-76 ref|ZP_05637186.1| baseplate J-like protein [Pseudomonas syringa... 290 2e-76 ref|YP_237655.1| baseplate J-like protein [Pseudomonas syringae ... 290 2e-76 >ref|YP_258355.1| baseplate J family protein [Pseudomonas fluorescens Pf-5] gb|AAY90511.1| baseplate J family protein [Pseudomonas fluorescens Pf-5] Length = 346 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 169/349 (48%), Positives = 225/349 (64%), Gaps = 5/349 (1%) Query: 1 MPFNIPGLVALIKRVRADLVPATSTGALRRTDAEVLSRVHSGVASGLYQHQDYIAAQSLP 60 MPF P L LI+R ++DL ++ +LR++DA+VL+R SG A GLY + D+IA Q LP Sbjct: 1 MPFETPSLPVLIQRTQSDL----ASDSLRQSDAQVLARTLSGAAFGLYGYLDWIAEQILP 56 Query: 61 DKCDEDMLLRYAQWRLGRGYRAATYATGFMECEGQSGAPVDAGTLFQAPD-RSQVIVAAD 119 DK DE L R A RL + + A A+G + +GA +D GTL Q+ D RS + AA Sbjct: 57 DKADESTLERIAALRLNQPRKTAQAASGSVSFNAAAGAVLDLGTLLQSSDGRSYTVTAAR 116 Query: 120 TVINGVTVVPIRAVVAGAAGNLDGGTKLTAVSPVLGVSDEAVITSGGMTGGVNQETLEQL 179 T G+ I+AV G GN D G +LTAV PV G+S+ + + G++GGV +E+LE L Sbjct: 117 TTSAGLNSTTIQAVDGGTLGNADAGLELTAVQPVQGISNSFTVLAPGLSGGVARESLESL 176 Query: 180 RAAVLRTYRLVPQGGSADDYETWALEYPGVTRAWTRRNWVGPGTVAVFIMCDGDDDPFPS 239 R+ V+R+YR++P GGSADDYETWA+E PG+TRAW RRN++GPGTV +F+M D D P P+ Sbjct: 177 RSRVIRSYRIIPHGGSADDYETWAMECPGITRAWCRRNYLGPGTVGLFVMRDDDLQPIPN 236 Query: 240 EAFRTAVFEYIDKKRHATGELYVLAPKPKPIVYQIRLTPDTGPVRAAVRAALKALILAEA 299 V YI+ R T E++VLAP +P++YQ+RLTPDT VRAAV L+ L EA Sbjct: 237 AEQMARVLAYIEPLRPVTAEVHVLAPVIQPVIYQVRLTPDTSAVRAAVEDQLRDLHSREA 296 Query: 300 SLGVTLPRSHQDEAISGAAGEDDHEMLVPAANVTVLRNEIATFGDIEWL 348 LG TL SH EAIS A GE DH +L P A+V N++ FG +WL Sbjct: 297 GLGETLLLSHIREAISSATGEQDHRLLAPLADVPASSNQLLVFGGCQWL 345 >ref|YP_004352293.1| phage tail protein; baseplate J-like protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA67289.1| Putative phage tail protein; putative baseplate J-like protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 346 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 164/349 (46%), Positives = 218/349 (62%), Gaps = 5/349 (1%) Query: 1 MPFNIPGLVALIKRVRADLVPATSTGALRRTDAEVLSRVHSGVASGLYQHQDYIAAQSLP 60 MPF P L LIKR ++DL ++ +LR++DA+VL+R G A GLY + D+IA Q LP Sbjct: 1 MPFETPSLPVLIKRAQSDL----ASDSLRQSDAQVLARTLGGAAYGLYGYLDWIAEQILP 56 Query: 61 DKCDEDMLLRYAQWRLGRGYRAATYATGFMECEGQSGAPVDAGTLFQAPD-RSQVIVAAD 119 DK DE L R A RL + +AA A+G + +GA +D TL Q+ D R+ + A Sbjct: 57 DKADESTLERIAALRLNQARKAAQVASGSVSFSATAGAVLDVDTLLQSADGRTFKVTTAR 116 Query: 120 TVINGVTVVPIRAVVAGAAGNLDGGTKLTAVSPVLGVSDEAVITSGGMTGGVNQETLEQL 179 T NG+ I A+ AG+ GN D G LT + P+LG+ + + G+TGGV +E+LE L Sbjct: 117 TTSNGLNSTTIAALDAGSLGNADAGLVLTPIQPILGIGSSFTVLAPGLTGGVARESLESL 176 Query: 180 RAAVLRTYRLVPQGGSADDYETWALEYPGVTRAWTRRNWVGPGTVAVFIMCDGDDDPFPS 239 RA V+R+YR++P GGSA DYETWALE PG+TRAW R +++GPGTV +F+M D D P P+ Sbjct: 177 RARVIRSYRIIPHGGSAQDYETWALECPGITRAWCRGSYLGPGTVGLFVMRDDDLQPIPN 236 Query: 240 EAFRTAVFEYIDKKRHATGELYVLAPKPKPIVYQIRLTPDTGPVRAAVRAALKALILAEA 299 V YI+ R T EL+VLAP P+ Y++R+TPDT VRAAV A L+ L EA Sbjct: 237 AEQLEEVRAYIEPLRPVTAELHVLAPTQVPVSYRLRITPDTSAVRAAVEAQLRDLHNREA 296 Query: 300 SLGVTLPRSHQDEAISGAAGEDDHEMLVPAANVTVLRNEIATFGDIEWL 348 LG TL SH EAIS A GE DH++ P +V N++ TFG WL Sbjct: 297 GLGETLLLSHITEAISSATGETDHKLSAPVTDVAAASNQLLTFGGCTWL 345 >gb|ACH86143.1| tail protein [Pseudomonas phage DVM-2008] Length = 346 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 164/349 (46%), Positives = 218/349 (62%), Gaps = 5/349 (1%) Query: 1 MPFNIPGLVALIKRVRADLVPATSTGALRRTDAEVLSRVHSGVASGLYQHQDYIAAQSLP 60 MPF P L LIKR ++DL ++ +LR++DA+VL+R G A GLY + D+IA Q LP Sbjct: 1 MPFETPSLPVLIKRAQSDL----ASDSLRQSDAQVLARTLGGAAYGLYGYLDWIAEQILP 56 Query: 61 DKCDEDMLLRYAQWRLGRGYRAATYATGFMECEGQSGAPVDAGTLFQAPD-RSQVIVAAD 119 DK DE L R A RL + +AA A+G + +GA +D TL Q+ D R+ + A Sbjct: 57 DKADESTLERIAALRLNQARKAAQVASGSVSFSATAGAVLDVDTLLQSTDGRTFKVTTAR 116 Query: 120 TVINGVTVVPIRAVVAGAAGNLDGGTKLTAVSPVLGVSDEAVITSGGMTGGVNQETLEQL 179 T NG+ + A+ AG+ GN D G LT V P+LG+ + + G+TGGV +E+LE L Sbjct: 117 TTSNGLNNTTVAALDAGSLGNADAGLVLTPVQPILGIGSSFTVLAPGLTGGVARESLESL 176 Query: 180 RAAVLRTYRLVPQGGSADDYETWALEYPGVTRAWTRRNWVGPGTVAVFIMCDGDDDPFPS 239 RA V+R+YR++P GGSA DYETWALE PG+TRAW R +++GPGTV +F+M D D P P+ Sbjct: 177 RARVIRSYRIIPHGGSAQDYETWALECPGITRAWCRGSYLGPGTVGLFVMRDDDLQPIPN 236 Query: 240 EAFRTAVFEYIDKKRHATGELYVLAPKPKPIVYQIRLTPDTGPVRAAVRAALKALILAEA 299 V YI+ R T EL+VLAP P+ Y++R+TPDT VRAAV A L+ L EA Sbjct: 237 AEQLEEVRAYIEPLRPVTAELHVLAPTQVPVSYRLRITPDTSAVRAAVEAQLRDLHNREA 296 Query: 300 SLGVTLPRSHQDEAISGAAGEDDHEMLVPAANVTVLRNEIATFGDIEWL 348 LG TL SH EAIS A GE DH++ P +V N++ TFG WL Sbjct: 297 GLGETLLLSHITEAISSATGETDHKLSAPVTDVAAASNQLLTFGGCTWL 345 >ref|ZP_05637186.1| baseplate J-like protein [Pseudomonas syringae pv. tabaci ATCC 11528] gb|EGH91677.1| baseplate J-like protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 346 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 171/348 (49%), Positives = 214/348 (61%), Gaps = 5/348 (1%) Query: 1 MPFNIPGLVALIKRVRADLVPATSTGALRRTDAEVLSRVHSGVASGLYQHQDYIAAQSLP 60 MPF P L ALI R + DL + ALR++DA VLSR HSG A GLY +QD+IA Q LP Sbjct: 1 MPFETPTLPALINRTQVDL----ADEALRQSDARVLSRAHSGAAYGLYGYQDWIADQILP 56 Query: 61 DKCDEDMLLRYAQWRLGRGYRAATYATGFMECEGQSGAPVDAGTLFQAPD-RSQVIVAAD 119 D DE+ L R A RL + + A ATG + +GA +DA T+ Q D R + Sbjct: 57 DTADEETLERQAILRLRQPRKVAQAATGTVRFTAAAGAVLDADTVLQFSDGRFYRVTKGV 116 Query: 120 TVINGVTVVPIRAVVAGAAGNLDGGTKLTAVSPVLGVSDEAVITSGGMTGGVNQETLEQL 179 T + G + AV AG GN D G +TAV PV G+ + +GG++GG++QE++E L Sbjct: 117 TTVAGNNTTTVEAVDAGVLGNADAGLAMTAVQPVEGIDSTFTVIAGGLSGGISQESIESL 176 Query: 180 RAAVLRTYRLVPQGGSADDYETWALEYPGVTRAWTRRNWVGPGTVAVFIMCDGDDDPFPS 239 RA V+R+YR++P GG+ DDY TWALE PGVTRAW R ++GPGTVAVF M D DP P Sbjct: 177 RARVVRSYRVIPHGGNQDDYVTWALEVPGVTRAWCVRRFMGPGTVAVFFMRDDQADPIPD 236 Query: 240 EAFRTAVFEYIDKKRHATGELYVLAPKPKPIVYQIRLTPDTGPVRAAVRAALKALILAEA 299 AV YI+ R T ++YVLAP KP+VY IRLTPDT VRAAV A L L E Sbjct: 237 AEQLAAVAAYIEPLRPVTADVYVLAPVQKPVVYTIRLTPDTSAVRAAVEAQLLDLHNREG 296 Query: 300 SLGVTLPRSHQDEAISGAAGEDDHEMLVPAANVTVLRNEIATFGDIEW 347 LG TL +H EAIS A GE DH ++ P ANV N++ TFG I+W Sbjct: 297 GLGETLLLTHIAEAISRATGETDHVLIAPVANVAAGPNQLLTFGGIQW 344 >ref|YP_237655.1| baseplate J-like protein [Pseudomonas syringae pv. syringae B728a] gb|AAY39617.1| Baseplate J-like protein [Pseudomonas syringae pv. syringae B728a] gb|EGH70871.1| baseplate J-like protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 346 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 171/348 (49%), Positives = 214/348 (61%), Gaps = 5/348 (1%) Query: 1 MPFNIPGLVALIKRVRADLVPATSTGALRRTDAEVLSRVHSGVASGLYQHQDYIAAQSLP 60 MPF P L ALI R + DL + ALR++DA VLSR HSG A GLY +QD+IA Q LP Sbjct: 1 MPFETPTLPALINRTQVDL----ADEALRQSDARVLSRAHSGAAYGLYGYQDWIADQILP 56 Query: 61 DKCDEDMLLRYAQWRLGRGYRAATYATGFMECEGQSGAPVDAGTLFQAPD-RSQVIVAAD 119 D DE+ L R A RL + + A ATG + +GA +DA T+ Q D R + Sbjct: 57 DTADEETLERQAILRLRQPRKVAQAATGTVRFSAAAGAVLDADTVLQFSDGRFYRVTKGV 116 Query: 120 TVINGVTVVPIRAVVAGAAGNLDGGTKLTAVSPVLGVSDEAVITSGGMTGGVNQETLEQL 179 T + G + AV AG GN D G +TAV PV G+ + + G++GG++QE++E L Sbjct: 117 TTVAGNNTTTVEAVDAGVLGNADAGLVMTAVQPVEGIDSTFTVIADGLSGGISQESIESL 176 Query: 180 RAAVLRTYRLVPQGGSADDYETWALEYPGVTRAWTRRNWVGPGTVAVFIMCDGDDDPFPS 239 RA V+R+YR++P GG+ DDY TWALE PGVTRAW R ++GPGTVAVF M D DP P Sbjct: 177 RARVVRSYRVIPHGGNQDDYVTWALEVPGVTRAWCVRRFMGPGTVAVFFMRDDQADPIPD 236 Query: 240 EAFRTAVFEYIDKKRHATGELYVLAPKPKPIVYQIRLTPDTGPVRAAVRAALKALILAEA 299 AV YI+ R T ++YVLAP KP+VY IRLTPDT VRAAV A L L E Sbjct: 237 AEQLAAVAAYIEPLRPVTADVYVLAPVQKPVVYTIRLTPDTSAVRAAVEAQLLDLHNREG 296 Query: 300 SLGVTLPRSHQDEAISGAAGEDDHEMLVPAANVTVLRNEIATFGDIEW 347 LG TL +H EAIS A GE DH ++ P ANVT N++ TFG I+W Sbjct: 297 GLGETLLLTHIAEAISRATGETDHVLVSPVANVTAAANQLLTFGGIQW 344