BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3995.p (499 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776651.1| xanthine dehydrogenase subunit A [Herbaspiri... 845 0.0 ref|YP_001352197.1| xanthine dehydrogenase, subunit A [Janthinob... 800 0.0 gb|ADI18829.1| xanthine dehydrogenase, iron-sulfur cluster and f... 714 0.0 ref|YP_004754789.1| xanthine dehydrogenase, iron-sulfur cluster ... 692 0.0 ref|ZP_08275059.1| Xanthine dehydrogenase, iron-sulfur cluster a... 658 0.0 >ref|YP_003776651.1| xanthine dehydrogenase subunit A [Herbaspirillum seropedicae SmR1] emb|CAM32571.2| xanthine dehydrogenase (subunit A) protein [Herbaspirillum seropedicae] gb|ADJ64743.1| xanthine dehydrogenase (subunit A) protein [Herbaspirillum seropedicae SmR1] Length = 494 Score = 845 bits (2183), Expect = 0.0, Method: Composition-based stats. Identities = 421/488 (86%), Positives = 452/488 (92%) Query: 1 MPETTRPIQFYFRGQTHEVAGQPTTRTVLQHLREDLHCTGTKEGCAEGDCGACTVVVGEL 60 M ET IQFYFRGQTH VAG TRTVLQHLREDLHCTGTKEGCAEGDCGACTVVVGEL Sbjct: 1 MSETHSSIQFYFRGQTHSVAGHSPTRTVLQHLREDLHCTGTKEGCAEGDCGACTVVVGEL 60 Query: 61 RDDQLELKTVNACIQFLPTLDGRALFTVEDLKQSDGCLHPVQQAMVECHGSQCGFCTPGF 120 + +QL LKTVNACIQFLPTLDGRALFTVEDLKQ+DG LHPVQQAMVECHGSQCGFCTPGF Sbjct: 61 QGEQLALKTVNACIQFLPTLDGRALFTVEDLKQADGSLHPVQQAMVECHGSQCGFCTPGF 120 Query: 121 VMSLWGLYLKHDKDGITPDKREIDDALSGNLCRCTGYRPIIDAARRMGELPKVEFDREAV 180 VMSLWGLYL+H++DG+TP KREIDDALSGNLCRCTGYRPIIDAARRMGELPKVEFDREA+ Sbjct: 121 VMSLWGLYLRHEQDGVTPSKREIDDALSGNLCRCTGYRPIIDAARRMGELPKVEFDREAI 180 Query: 181 KTALRAIDQDTPLAVTHSGQTFHAPRTLAQLVQLRADLPKARILAGSTDVGLWVTKQMRE 240 K ALR+IDQ PLA+TH+GQTFHAPRTLAQL QLRADLP+ARILAGSTDVGLWVTKQMRE Sbjct: 181 KAALRSIDQQQPLALTHAGQTFHAPRTLAQLAQLRADLPQARILAGSTDVGLWVTKQMRE 240 Query: 241 LGDIVYIGRVEELRAMQVQDGMLEIGAGVSLEEAYAEAARHYPEELSELWQRFASLPVRN 300 LGD++YIGRVEELRAMQV+D MLEIGAGV LEEAYAEAARHYPEELSELWQRFASLPVRN Sbjct: 241 LGDLLYIGRVEELRAMQVRDEMLEIGAGVCLEEAYAEAARHYPEELSELWQRFASLPVRN 300 Query: 301 AGTLGGNVANGSPIGDSMPWLIALGAQIVLASVRGQRVMPLEDFYLAYQKSALQPDEVVQ 360 AGTLGGN+ANGSPIGDSMPWLIALGAQIVL SVRGQRVMPLEDFYLAYQKSALQ DE+VQ Sbjct: 301 AGTLGGNLANGSPIGDSMPWLIALGAQIVLYSVRGQRVMPLEDFYLAYQKSALQADELVQ 360 Query: 361 AVRIPLPRKDVRFRVYKLSKRFDQDISAVCAAFAFRLEGGKVIDARMAYGGMAATPKRAA 420 AVRIPLPRK++RFRVYKLSKRFDQDISAVCAAFA +++G ++ AR+AYGGMAATPKRAA Sbjct: 361 AVRIPLPRKELRFRVYKLSKRFDQDISAVCAAFALQMQGDTIVQARIAYGGMAATPKRAA 420 Query: 421 QAEAALNGKEWNEANVKAAMLALAQDYAPLSDMRASSAYRMRTAQNLLYRYWLETRADAP 480 QAEA L G W+EA +AAM ALAQDYAPLSDMRAS+AYR+RTAQNLLYRYWLETR+DAP Sbjct: 421 QAEAVLQGGPWSEAQAQAAMAALAQDYAPLSDMRASAAYRLRTAQNLLYRYWLETRSDAP 480 Query: 481 LPAASVSA 488 L + A Sbjct: 481 LARQELRA 488 >ref|YP_001352197.1| xanthine dehydrogenase, subunit A [Janthinobacterium sp. Marseille] gb|ABR89028.1| xanthine dehydrogenase, subunit A [Janthinobacterium sp. Marseille] Length = 496 Score = 800 bits (2065), Expect = 0.0, Method: Composition-based stats. Identities = 387/495 (78%), Positives = 427/495 (86%) Query: 5 TRPIQFYFRGQTHEVAGQPTTRTVLQHLREDLHCTGTKEGCAEGDCGACTVVVGELRDDQ 64 + PI+FYFRG THEV+G TRTVLQHLRED+HCTGTKEGCAEGDCGACTVVVGEL D Sbjct: 2 SEPIRFYFRGTTHEVSGISNTRTVLQHLREDMHCTGTKEGCAEGDCGACTVVVGELHGDH 61 Query: 65 LELKTVNACIQFLPTLDGRALFTVEDLKQSDGCLHPVQQAMVECHGSQCGFCTPGFVMSL 124 LEL TVN+CIQFLPTLDG+ALFTVEDLKQSDGCLHPVQQAMVECHGSQCGFCTPGFVMSL Sbjct: 62 LELNTVNSCIQFLPTLDGKALFTVEDLKQSDGCLHPVQQAMVECHGSQCGFCTPGFVMSL 121 Query: 125 WGLYLKHDKDGITPDKREIDDALSGNLCRCTGYRPIIDAARRMGELPKVEFDREAVKTAL 184 W LY + R+IDDALSGNLCRCTGYRPIIDAA RMGELP V+FD V AL Sbjct: 122 WNLYQRDAGSDTALSPRQIDDALSGNLCRCTGYRPIIDAAHRMGELPPVQFDHAPVIDAL 181 Query: 185 RAIDQDTPLAVTHSGQTFHAPRTLAQLVQLRADLPKARILAGSTDVGLWVTKQMRELGDI 244 RAI + L+++H G+TFHAPRT+AQL LRA+LPKARILAGSTDVGLWVTK MR+LGDI Sbjct: 182 RAIQRHEVLSISHDGRTFHAPRTIAQLAALRAELPKARILAGSTDVGLWVTKHMRDLGDI 241 Query: 245 VYIGRVEELRAMQVQDGMLEIGAGVSLEEAYAEAARHYPEELSELWQRFASLPVRNAGTL 304 +YIG+VE L++++ + G LEIGAGV+LE+AYA A +HYP+ELSELWQRFASLPVRNAGTL Sbjct: 242 IYIGQVEALKSIKERSGWLEIGAGVTLEKAYAAAHQHYPQELSELWQRFASLPVRNAGTL 301 Query: 305 GGNVANGSPIGDSMPWLIALGAQIVLASVRGQRVMPLEDFYLAYQKSALQPDEVVQAVRI 364 GGNVANGSPIGDSMPWLIALG IVL SV G+R MPLEDFYLAYQKSALQP+E VQAVRI Sbjct: 302 GGNVANGSPIGDSMPWLIALGTHIVLRSVVGEREMPLEDFYLAYQKSALQPNEFVQAVRI 361 Query: 365 PLPRKDVRFRVYKLSKRFDQDISAVCAAFAFRLEGGKVIDARMAYGGMAATPKRAAQAEA 424 PLPR+DV FR YKLSKRFDQDISAVCAAFAF L G+V +AR+AYGGMAATPKRAA AEA Sbjct: 362 PLPRQDVVFRTYKLSKRFDQDISAVCAAFAFELVDGQVRNARIAYGGMAATPKRAALAEA 421 Query: 425 ALNGKEWNEANVKAAMLALAQDYAPLSDMRASSAYRMRTAQNLLYRYWLETRADAPLPAA 484 ALNGK WNE NV+AA+ LAQDYAPLSDMRASSAYRM+TAQNLLYRYWLETRADAP+PA Sbjct: 422 ALNGKAWNEENVRAAISLLAQDYAPLSDMRASSAYRMKTAQNLLYRYWLETRADAPMPAT 481 Query: 485 SVSAFVHGKSAAGIA 499 S+ AF + A A Sbjct: 482 SLRAFTINAATAQTA 496 >gb|ADI18829.1| xanthine dehydrogenase, iron-sulfur cluster and fad-binding subunit a [uncultured beta proteobacterium HF0010_04H24] Length = 509 Score = 714 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 343/485 (70%), Positives = 401/485 (82%), Gaps = 2/485 (0%) Query: 5 TRPIQFYFRGQTHEVAGQPTTRTVLQHLREDLHCTGTKEGCAEGDCGACTVVVGELRDDQ 64 + PI+FY+RG EV T+TVLQHLREDLHCTGTKEGCAEGDCGACTVV+G L D Sbjct: 23 SEPIRFYYRGAVQEVRNAAPTQTVLQHLREDLHCTGTKEGCAEGDCGACTVVIGSLVDGL 82 Query: 65 LELKTVNACIQFLPTLDGRALFTVEDLKQSDGCLHPVQQAMVECHGSQCGFCTPGFVMSL 124 +E+K VNACIQ PTLDG+ALF+VEDL+Q DG LHPVQQAMVECHGSQCGFCTPGFVMSL Sbjct: 83 VEMKAVNACIQLTPTLDGKALFSVEDLQQPDGALHPVQQAMVECHGSQCGFCTPGFVMSL 142 Query: 125 WGLYLKHDKDGITPDKREIDDALSGNLCRCTGYRPIIDAARRMGELPKVEFDREAVKTAL 184 WG+YL +K+G TP + EIDDALSGNLCRCTGYRPIIDAARRMGELP V FDR+A+ L Sbjct: 143 WGMYL--EKNGATPTRCEIDDALSGNLCRCTGYRPIIDAARRMGELPHVTFDRDALAQQL 200 Query: 185 RAIDQDTPLAVTHSGQTFHAPRTLAQLVQLRADLPKARILAGSTDVGLWVTKQMRELGDI 244 +A+ + + H GQ FHAPR++ +LV LRA P+A +LAGSTDVGLWVTKQ+R+LGDI Sbjct: 201 QALQRGSLSTYEHGGQHFHAPRSIDELVALRAKKPQACLLAGSTDVGLWVTKQLRDLGDI 260 Query: 245 VYIGRVEELRAMQVQDGMLEIGAGVSLEEAYAEAARHYPEELSELWQRFASLPVRNAGTL 304 +Y+G V L+ + + DG L+IGAG SL +AYA RHYP+ELSELWQRFASLP+RNAGTL Sbjct: 261 IYLGNVAALKTIGIVDGKLQIGAGASLNDAYAALCRHYPDELSELWQRFASLPIRNAGTL 320 Query: 305 GGNVANGSPIGDSMPWLIALGAQIVLASVRGQRVMPLEDFYLAYQKSALQPDEVVQAVRI 364 GGNVANGSPIGDSMPWLIALG++IVL GQR+MPLE+FYLAYQK LQP E V+AVR+ Sbjct: 321 GGNVANGSPIGDSMPWLIALGSEIVLRGPAGQRIMPLENFYLAYQKKDLQPCEFVEAVRV 380 Query: 365 PLPRKDVRFRVYKLSKRFDQDISAVCAAFAFRLEGGKVIDARMAYGGMAATPKRAAQAEA 424 PLPR DV+FR YKL+KRFDQDISAVCAAFAF L+G +++DAR+A+GGMAATP+RAAQ EA Sbjct: 381 PLPRADVQFRTYKLAKRFDQDISAVCAAFAFELDGERIVDARIAFGGMAATPQRAAQTEA 440 Query: 425 ALNGKEWNEANVKAAMLALAQDYAPLSDMRASSAYRMRTAQNLLYRYWLETRADAPLPAA 484 L G+ W E N+ AM LA DYAPLSDMRAS+ YRM TAQNLL R+WLETR APLP Sbjct: 441 FLLGQAWTEENLVIAMRLLADDYAPLSDMRASNTYRMMTAQNLLRRFWLETRPGAPLPPT 500 Query: 485 SVSAF 489 S++A+ Sbjct: 501 SLNAY 505 >ref|YP_004754789.1| xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Collimonas fungivorans Ter331] gb|AEK63966.1| Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Collimonas fungivorans Ter331] Length = 515 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 338/497 (68%), Positives = 398/497 (80%), Gaps = 15/497 (3%) Query: 8 IQFYFRGQTHEVAGQPTTRTVLQHLREDLHCTGTKEGCAEGDCGACTVVVGELRDDQLEL 67 I+FY+RG+ H V TRT+LQHLREDLHCTG+KEGCAEGDCGACTVV+GE + + L Sbjct: 18 IRFYYRGEIHAVDQAAPTRTILQHLREDLHCTGSKEGCAEGDCGACTVVIGEQGPEGVTL 77 Query: 68 KTVNACIQFLPTLDGRALFTVEDLKQSDGCLHPVQQAMVECHGSQCGFCTPGFVMSLWGL 127 K+VN+CIQFLPTLDG+AL+TVEDLKQ G LHPVQQAMVECHGSQCGFCTPGFVMSLW L Sbjct: 78 KSVNSCIQFLPTLDGKALYTVEDLKQDSGALHPVQQAMVECHGSQCGFCTPGFVMSLWDL 137 Query: 128 YLKHDKDGITP--------------DKREIDDALSGNLCRCTGYRPIIDAARRMGELPKV 173 YLKHD + +++ID ALSGNLCRCTGYRPIIDAARRMGELP V Sbjct: 138 YLKHDGSHASSSAAACSSAGACQPLQRKDIDIALSGNLCRCTGYRPIIDAARRMGELPAV 197 Query: 174 EFDREAVKTALRAIDQDTPLAVTHSGQTFHAPRTLAQLVQLRADLPKARILAGSTDVGLW 233 FDR+A++ AL+ + +D H GQTF+APRTLAQLV++RA P ARILAGSTDVGLW Sbjct: 198 GFDRQALQQALQPLQRDDTFVYKHDGQTFYAPRTLAQLVEVRAANPGARILAGSTDVGLW 257 Query: 234 VTKQMRELGDIVYIGRVEELRAMQVQDGMLEIGAGVSLEEAYAEAARHYPEELSELWQRF 293 VTKQ+R+LGDI+Y+G+V EL AM +++G LEIGAGV+L +AYAE +HYPE LSE+WQRF Sbjct: 258 VTKQIRDLGDIIYLGQVSELNAMALREGQLEIGAGVTLNDAYAEICKHYPE-LSEMWQRF 316 Query: 294 ASLPVRNAGTLGGNVANGSPIGDSMPWLIALGAQIVLASVRGQRVMPLEDFYLAYQKSAL 353 ASLP+RNAGTLGGNVANGSPIGDS PWLIALGAQ+VL GQRVMPLE YL Y K + Sbjct: 317 ASLPIRNAGTLGGNVANGSPIGDSPPWLIALGAQVVLRGPAGQRVMPLEALYLDYMKKDM 376 Query: 354 QPDEVVQAVRIPLPRKDVRFRVYKLSKRFDQDISAVCAAFAFRLEGGKVIDARMAYGGMA 413 Q DE+V+AVRIPLP RFR YKL+KRFDQDISAVCAAF+ L+GGK+ D R+A+GGMA Sbjct: 377 QADELVEAVRIPLPHAGQRFRTYKLAKRFDQDISAVCAAFSVTLDGGKISDIRIAFGGMA 436 Query: 414 ATPKRAAQAEAALNGKEWNEANVKAAMLALAQDYAPLSDMRASSAYRMRTAQNLLYRYWL 473 ATPKRAA EAAL G+ W+E+ ++ A+ + DY PLSDMRASS YRM+T+QNLL R+WL Sbjct: 437 ATPKRAALTEAALRGQVWSESVLENAVALMTDDYKPLSDMRASSEYRMKTSQNLLRRFWL 496 Query: 474 ETRADAPLPAASVSAFV 490 ETR DAPL + V+ FV Sbjct: 497 ETRVDAPLRSDQVNPFV 513 >ref|ZP_08275059.1| Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Oxalobacteraceae bacterium IMCC9480] gb|EGF31469.1| Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Oxalobacteraceae bacterium IMCC9480] Length = 493 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 327/493 (66%), Positives = 379/493 (76%), Gaps = 5/493 (1%) Query: 5 TRPIQFYFRGQTHEVAGQPTTRTVLQHLREDLHCTGTKEGCAEGDCGACTVVVGELRDDQ 64 + I+F+FRG EV RTVLQ+LREDLHCTGTKEGCAEGDCGACTV+VG L D Sbjct: 2 SESIRFHFRGAMREVDAAAPLRTVLQYLREDLHCTGTKEGCAEGDCGACTVMVGRLHDGA 61 Query: 65 LELKTVNACIQFLPTLDGRALFTVEDLKQSDGCLHPVQQAMVECHGSQCGFCTPGFVMSL 124 L L+ VNACI+ LPTLDG+ALFTVEDL+Q+DG LHPVQQAMV+CHGSQCGFCTPGFVMSL Sbjct: 62 LRLEPVNACIRLLPTLDGKALFTVEDLQQADGTLHPVQQAMVDCHGSQCGFCTPGFVMSL 121 Query: 125 WGLYLKHDKDGITPDKREIDDALSGNLCRCTGYRPIIDAARRMGELPKVEFDREAVKTAL 184 W LYL+ + P +R++DDALSGNLCRCTGYRPII AA RMGELP V FDR V AL Sbjct: 122 WNLYLQREGQPAPPSRRQVDDALSGNLCRCTGYRPIIAAATRMGELPPVAFDRATVIAAL 181 Query: 185 RAIDQDTPLAVTHS---GQTFHAPRTLAQLVQLRADLPKARILAGSTDVGLWVTKQMREL 241 + DT TH+ G TF APRTL+Q +QLR P A +LAGSTDVGLW TKQ+R L Sbjct: 182 EPLHSDT--LRTHALADGYTFFAPRTLSQAIQLRTTHPAATLLAGSTDVGLWFTKQLRVL 239 Query: 242 GDIVYIGRVEELRAMQVQDGMLEIGAGVSLEEAYAEAARHYPEELSELWQRFASLPVRNA 301 GDIVY+G V L A+ D L+IGA SLE AY ++YP+EL+ELWQRFASLPVRNA Sbjct: 240 GDIVYLGEVAGLDAIDSSDTHLQIGATASLEAAYQAICQYYPDELTELWQRFASLPVRNA 299 Query: 302 GTLGGNVANGSPIGDSMPWLIALGAQIVLASVRGQRVMPLEDFYLAYQKSALQPDEVVQA 361 GTLGGNVANGSPIGDSMPWLIALGA +VL G R + LEDFYL YQK ++PDE+V A Sbjct: 300 GTLGGNVANGSPIGDSMPWLIALGADVVLQGSTGTRTLALEDFYLGYQKKDMRPDELVAA 359 Query: 362 VRIPLPRKDVRFRVYKLSKRFDQDISAVCAAFAFRLEGGKVIDARMAYGGMAATPKRAAQ 421 VRIPL + ++R YKL+KRFDQDISAVCAAF+ RLEG + D R+AYGGMAATPKRA+ Sbjct: 360 VRIPLRQMGQQWRTYKLAKRFDQDISAVCAAFSIRLEGDLITDIRIAYGGMAATPKRASH 419 Query: 422 AEAALNGKEWNEANVKAAMLALAQDYAPLSDMRASSAYRMRTAQNLLYRYWLETRADAPL 481 AE +L G+ WN+A++ AM AL DY PL DMRAS+AYRM+ AQNLL R+W ETR DAPL Sbjct: 420 AEGSLLGQPWNDASLTRAMAALTSDYTPLGDMRASAAYRMKAAQNLLRRFWFETRTDAPL 479 Query: 482 PAASVSAFVHGKS 494 A V+AF HG + Sbjct: 480 APAQVNAFAHGDT 492