BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3994.p (433 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776650.1| transmembrane protein [Herbaspirillum serope... 682 0.0 ref|YP_001352198.1| uracil/xanthine permease [Janthinobacterium ... 600 e-169 ref|ZP_07674003.1| xanthine/uracil permease family protein [Rals... 573 e-161 ref|YP_001892323.1| Xanthine/uracil/vitamin C permease [Ralstoni... 572 e-161 ref|YP_002008938.1| permease, inner membrane protein, xanthine/u... 563 e-158 >ref|YP_003776650.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64742.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 432 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 414/431 (96%), Positives = 424/431 (98%) Query: 1 MNALNKFFRLEENGTTVRTELLAGLTTFLTMAYIIFVNPSILGDAGMPKDSVFVATCVAA 60 MNALNKFFRL+ENGTT+RTELLAGLTTFLTMAYIIFVNPSILGDAGMPKD+VFVATC+AA Sbjct: 1 MNALNKFFRLDENGTTIRTELLAGLTTFLTMAYIIFVNPSILGDAGMPKDAVFVATCIAA 60 Query: 61 AVGTLIMGLYANYPIGLAPGMGLNAYFAYAVVKGMGFPWQAALGAVLISGCLFLLVSVLR 120 AVGTLIMGLYANYPIGLAPGMGLNAYFAYAVVKGMGFPWQAALGAVLISGCLFLLVSVLR Sbjct: 61 AVGTLIMGLYANYPIGLAPGMGLNAYFAYAVVKGMGFPWQAALGAVLISGCLFLLVSVLR 120 Query: 121 VRELIIKSIPQSLRTAIPAGIGLFLAIISLKSAGIVAANPATFVTLGDLHQPAPVMAIIG 180 VRELII SIP+SLRTAIPAGIGLFL IISLKSAGI+AANPATFVTLGDLHQP VMAIIG Sbjct: 121 VRELIISSIPRSLRTAIPAGIGLFLGIISLKSAGIIAANPATFVTLGDLHQPPAVMAIIG 180 Query: 181 FLVIVALDRLKVRGALLIGILLVTVLSFVFGGNHFSGIFAAPPSIAPTFLQLDIKGAISM 240 FLVIVALDRLKVRGALLIGILLVTVLSFVFGGNHFSGIFAAPPSIAPT LQLDIKGA+SM Sbjct: 181 FLVIVALDRLKVRGALLIGILLVTVLSFVFGGNHFSGIFAAPPSIAPTLLQLDIKGALSM 240 Query: 241 GLLNVVLVFFLVELFDATGTLMGVATRAGLMKDGKMERLNKALMADSTAIVAGSLLGTSS 300 GLLNVVLVFFLVELFDATGTLMGVATRAGLMK+GKMERLNKALMADSTAIVAGSLLGTSS Sbjct: 241 GLLNVVLVFFLVELFDATGTLMGVATRAGLMKEGKMERLNKALMADSTAIVAGSLLGTSS 300 Query: 301 TTAYIESAAGVQAGGRTGLTAVAIAVLFLLCLFIAPLAGVVPAYATAPALFFVACLMLRE 360 TTAYIESAAGVQAGGRTGLTAVAIAVLFLLCLFIAPLAGVVPAYATAPALFFVACLMLRE Sbjct: 301 TTAYIESAAGVQAGGRTGLTAVAIAVLFLLCLFIAPLAGVVPAYATAPALFFVACLMLRE 360 Query: 361 LVHIDWEDTTECVPAVITALVMPFTYSIANGLALGFISYAGLKLLTGRMKDVSVVIWIIA 420 LVHIDWEDTTECVPAVITALVMPFTYSIANGLALGFISYA LKLLTGR KDVSVVIW+IA Sbjct: 361 LVHIDWEDTTECVPAVITALVMPFTYSIANGLALGFISYAALKLLTGRAKDVSVVIWVIA 420 Query: 421 AIFLFKIIYLG 431 AIFLFK+IYLG Sbjct: 421 AIFLFKLIYLG 431 >ref|YP_001352198.1| uracil/xanthine permease [Janthinobacterium sp. Marseille] gb|ABR89510.1| uracil/xanthine permease (NCS2 family) [Janthinobacterium sp. Marseille] Length = 431 Score = 600 bits (1548), Expect = e-169, Method: Composition-based stats. Identities = 353/431 (81%), Positives = 394/431 (91%) Query: 1 MNALNKFFRLEENGTTVRTELLAGLTTFLTMAYIIFVNPSILGDAGMPKDSVFVATCVAA 60 M L KFF+L E+GTTVRTELLAGLTTFLTMAYIIFVNP+ILGDAGMPKDSVFVATCVAA Sbjct: 1 MTFLEKFFKLNEHGTTVRTELLAGLTTFLTMAYIIFVNPAILGDAGMPKDSVFVATCVAA 60 Query: 61 AVGTLIMGLYANYPIGLAPGMGLNAYFAYAVVKGMGFPWQAALGAVLISGCLFLLVSVLR 120 A+GTLIMGLYANYPIGLAPGMGLNAYF+YAVV GMG+ WQAALGAV ISGCLF+LVS+ + Sbjct: 61 AIGTLIMGLYANYPIGLAPGMGLNAYFSYAVVLGMGYSWQAALGAVFISGCLFMLVSLFK 120 Query: 121 VRELIIKSIPQSLRTAIPAGIGLFLAIISLKSAGIVAANPATFVTLGDLHQPAPVMAIIG 180 +RELII SIP SLRTAIPAGIGLFL +I+LK+AGIV NP T +TLGDLHQP V+AIIG Sbjct: 121 IRELIINSIPVSLRTAIPAGIGLFLGLIALKNAGIVVGNPNTLITLGDLHQPPAVLAIIG 180 Query: 181 FLVIVALDRLKVRGALLIGILLVTVLSFVFGGNHFSGIFAAPPSIAPTFLQLDIKGAISM 240 F+VIVALDRLKVRGA+LIGIL VTVLSF F GNHF GIF+ PPS++PT LDI GA+ M Sbjct: 181 FIVIVALDRLKVRGAMLIGILAVTVLSFFFAGNHFVGIFSTPPSVSPTLFALDIPGALGM 240 Query: 241 GLLNVVLVFFLVELFDATGTLMGVATRAGLMKDGKMERLNKALMADSTAIVAGSLLGTSS 300 GL+NVVLVFFLVELFDATGTLMGVA RAGL+K+GK+ERLNKAL+ADS AI+AGS+LGTSS Sbjct: 241 GLINVVLVFFLVELFDATGTLMGVAQRAGLVKNGKIERLNKALLADSGAIIAGSMLGTSS 300 Query: 301 TTAYIESAAGVQAGGRTGLTAVAIAVLFLLCLFIAPLAGVVPAYATAPALFFVACLMLRE 360 TTAYIESAAGVQAGGRTGLTAV IA+LFLL LFIAPLAGVVPAYATAPALFFVACLMLRE Sbjct: 301 TTAYIESAAGVQAGGRTGLTAVTIAILFLLALFIAPLAGVVPAYATAPALFFVACLMLRE 360 Query: 361 LVHIDWEDTTECVPAVITALVMPFTYSIANGLALGFISYAGLKLLTGRMKDVSVVIWIIA 420 L IDWEDTTEC+PAVIT ++MPFTYS+ANG+ALGFI+YA LKLLTGR ++VS++IWIIA Sbjct: 361 LRDIDWEDTTECIPAVITTVIMPFTYSVANGMALGFITYAALKLLTGRAREVSIMIWIIA 420 Query: 421 AIFLFKIIYLG 431 A+FLFK+ YLG Sbjct: 421 ALFLFKLTYLG 431 >ref|ZP_07674003.1| xanthine/uracil permease family protein [Ralstonia sp. 5_7_47FAA] gb|EFP67678.1| xanthine/uracil permease family protein [Ralstonia sp. 5_7_47FAA] Length = 434 Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 323/432 (74%), Positives = 382/432 (88%) Query: 1 MNALNKFFRLEENGTTVRTELLAGLTTFLTMAYIIFVNPSILGDAGMPKDSVFVATCVAA 60 M + + F+LEE+ T VRTE+LAGLTTFLTMAYIIFVNP+IL DAGMP D+VFVATC+AA Sbjct: 1 MTWIARTFKLEEHQTNVRTEVLAGLTTFLTMAYIIFVNPNILADAGMPHDAVFVATCIAA 60 Query: 61 AVGTLIMGLYANYPIGLAPGMGLNAYFAYAVVKGMGFPWQAALGAVLISGCLFLLVSVLR 120 A+GT+IMG+YANYPI +APGMGLNAYFAYAVVKGMGF WQAALGAV ISGCLFLLVSV R Sbjct: 61 AIGTIIMGIYANYPIAMAPGMGLNAYFAYAVVKGMGFTWQAALGAVFISGCLFLLVSVFR 120 Query: 121 VRELIIKSIPQSLRTAIPAGIGLFLAIISLKSAGIVAANPATFVTLGDLHQPAPVMAIIG 180 +RE+I+ IP S+R AI AGIGLFL I+SL+ AG++ NPAT VTLGD+HQP+ ++A++G Sbjct: 121 IREMIVNGIPHSIRVAITAGIGLFLGIVSLRGAGLIVGNPATLVTLGDVHQPSVILAVVG 180 Query: 181 FLVIVALDRLKVRGALLIGILLVTVLSFVFGGNHFSGIFAAPPSIAPTFLQLDIKGAISM 240 F VIVALD L+V+GA+LIGIL VT SF F GN F G+ + PPS+APT LQLDI GA+S+ Sbjct: 181 FFVIVALDHLRVKGAILIGILAVTAASFFFAGNTFHGVVSMPPSLAPTLLQLDIMGALSV 240 Query: 241 GLLNVVLVFFLVELFDATGTLMGVATRAGLMKDGKMERLNKALMADSTAIVAGSLLGTSS 300 G+LNVVLVFFLVELFDATGTLMGVA RAGL+K GKM+RLNKAL+ADSTAI+AGSLLGTSS Sbjct: 241 GILNVVLVFFLVELFDATGTLMGVANRAGLLKQGKMDRLNKALLADSTAIMAGSLLGTSS 300 Query: 301 TTAYIESAAGVQAGGRTGLTAVAIAVLFLLCLFIAPLAGVVPAYATAPALFFVACLMLRE 360 TTAYIESA+GVQAGGRTGLTA+ +A LFLLCLF +PLAGVVPAYATAPAL +V+CLMLRE Sbjct: 301 TTAYIESASGVQAGGRTGLTALTVAALFLLCLFFSPLAGVVPAYATAPALLYVSCLMLRE 360 Query: 361 LVHIDWEDTTECVPAVITALVMPFTYSIANGLALGFISYAGLKLLTGRMKDVSVVIWIIA 420 LV ++WEDTTE VPAV+TAL+MPFTYSIANG+A GFI+Y+GLKL TGRM++V V++WII+ Sbjct: 361 LVDLNWEDTTEAVPAVLTALMMPFTYSIANGVAFGFITYSGLKLFTGRMREVPVIVWIIS 420 Query: 421 AIFLFKIIYLGG 432 A+FLF+ YL G Sbjct: 421 AVFLFRFFYLSG 432 >ref|YP_001892323.1| Xanthine/uracil/vitamin C permease [Ralstonia pickettii 12J] ref|YP_002983821.1| xanthine/uracil/vitamin C permease [Ralstonia pickettii 12D] gb|ACD28896.1| Xanthine/uracil/vitamin C permease [Ralstonia pickettii 12J] gb|ACS65149.1| Xanthine/uracil/vitamin C permease [Ralstonia pickettii 12D] Length = 434 Score = 572 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 321/432 (74%), Positives = 381/432 (88%) Query: 1 MNALNKFFRLEENGTTVRTELLAGLTTFLTMAYIIFVNPSILGDAGMPKDSVFVATCVAA 60 M L +FF+L+E+ T VRTE+LAGLTTFLTMAYI+FVNP+IL DAGMP D+VFVATC+AA Sbjct: 1 MTWLTRFFKLKEHQTDVRTEVLAGLTTFLTMAYIVFVNPNILADAGMPHDAVFVATCIAA 60 Query: 61 AVGTLIMGLYANYPIGLAPGMGLNAYFAYAVVKGMGFPWQAALGAVLISGCLFLLVSVLR 120 A GT+IMG+YANYPI +APGMGLNAYFAYAVVKGMGF WQAALGAV ISGCLFLLVSV R Sbjct: 61 ATGTIIMGMYANYPIAMAPGMGLNAYFAYAVVKGMGFTWQAALGAVFISGCLFLLVSVFR 120 Query: 121 VRELIIKSIPQSLRTAIPAGIGLFLAIISLKSAGIVAANPATFVTLGDLHQPAPVMAIIG 180 +RE+I+ IP S+R AI AGIGLFL I+SL+ AG+V NPAT V+LGD+HQP+ ++A+IG Sbjct: 121 IREMIVNGIPHSIRVAITAGIGLFLGIVSLRGAGLVVGNPATLVSLGDVHQPSVILAVIG 180 Query: 181 FLVIVALDRLKVRGALLIGILLVTVLSFVFGGNHFSGIFAAPPSIAPTFLQLDIKGAISM 240 F +IVALD L+V+GA+LIGIL VT SF F GN F G+ + PPS+ PT LQLDI GA+S+ Sbjct: 181 FFLIVALDHLRVKGAILIGILAVTAASFFFAGNTFHGVVSMPPSLTPTLLQLDIMGALSV 240 Query: 241 GLLNVVLVFFLVELFDATGTLMGVATRAGLMKDGKMERLNKALMADSTAIVAGSLLGTSS 300 G+LNVVLVFFLVELFDATGTLMGVA RAGL+K GKM+RLNKAL+ADSTAI+AGSLLGTSS Sbjct: 241 GILNVVLVFFLVELFDATGTLMGVANRAGLLKQGKMDRLNKALLADSTAIMAGSLLGTSS 300 Query: 301 TTAYIESAAGVQAGGRTGLTAVAIAVLFLLCLFIAPLAGVVPAYATAPALFFVACLMLRE 360 TTAYIESA+GVQAGGRTGLTA+ +AVLFLLCLF +PLAGVVPAYATAPAL +V+CLMLRE Sbjct: 301 TTAYIESASGVQAGGRTGLTALTVAVLFLLCLFFSPLAGVVPAYATAPALLYVSCLMLRE 360 Query: 361 LVHIDWEDTTECVPAVITALVMPFTYSIANGLALGFISYAGLKLLTGRMKDVSVVIWIIA 420 LV ++WEDTTE VPAV+TAL+MPFTYSIANG+A GFI+Y+GLKL TGR ++V +++WII+ Sbjct: 361 LVDLNWEDTTEAVPAVLTALMMPFTYSIANGVAFGFITYSGLKLFTGRAREVPIIVWIIS 420 Query: 421 AIFLFKIIYLGG 432 A+FLF+ YL G Sbjct: 421 AVFLFRFFYLSG 432 >ref|YP_002008938.1| permease, inner membrane protein, xanthine/uracil/vitamin c permease family [Cupriavidus taiwanensis LMG 19424] emb|CAQ72886.1| putative permease, inner membrane protein, Xanthine/uracil/vitamin C permease family [Cupriavidus taiwanensis LMG 19424] Length = 454 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 329/429 (76%), Positives = 380/429 (88%) Query: 4 LNKFFRLEENGTTVRTELLAGLTTFLTMAYIIFVNPSILGDAGMPKDSVFVATCVAAAVG 63 + + F+L E+ T VRTE+LAG+TTFLTMAYIIFVNPSILGDAGMPKD+VFVATCVAAA+G Sbjct: 25 IERAFKLREHHTDVRTEILAGITTFLTMAYIIFVNPSILGDAGMPKDAVFVATCVAAAIG 84 Query: 64 TLIMGLYANYPIGLAPGMGLNAYFAYAVVKGMGFPWQAALGAVLISGCLFLLVSVLRVRE 123 TLIMG YANYPI +APGMGLNAYFAY VVKGMGFPW+AALGAV ISGCLFLLV++ RVRE Sbjct: 85 TLIMGFYANYPIAMAPGMGLNAYFAYTVVKGMGFPWEAALGAVFISGCLFLLVTLFRVRE 144 Query: 124 LIIKSIPQSLRTAIPAGIGLFLAIISLKSAGIVAANPATFVTLGDLHQPAPVMAIIGFLV 183 +I+ IP S+R AI AGIGLFLAI++LK+AGIV A+PAT VTLGDLHQP+ V+AIIGF V Sbjct: 145 MIVNGIPHSIRVAITAGIGLFLAIVALKNAGIVTASPATLVTLGDLHQPSAVLAIIGFFV 204 Query: 184 IVALDRLKVRGALLIGILLVTVLSFVFGGNHFSGIFAAPPSIAPTFLQLDIKGAISMGLL 243 IVALD L+V+GA+LIGILL T+LSF F GN F G+F+APPS++PT +LDI A+S+G++ Sbjct: 205 IVALDHLRVKGAILIGILLTTLLSFAFAGNTFHGVFSAPPSLSPTLFKLDISAALSIGII 264 Query: 244 NVVLVFFLVELFDATGTLMGVATRAGLMKDGKMERLNKALMADSTAIVAGSLLGTSSTTA 303 NVVLVFFLVELFDATGTLMGVA RAGL+K GKM+RLNKALMADSTAI+AGS LGTSSTTA Sbjct: 265 NVVLVFFLVELFDATGTLMGVANRAGLLKAGKMDRLNKALMADSTAIMAGSFLGTSSTTA 324 Query: 304 YIESAAGVQAGGRTGLTAVAIAVLFLLCLFIAPLAGVVPAYATAPALFFVACLMLRELVH 363 YIESA+GVQAGGRTGLTAV +AVLFL LFIAPLAG VPAYATAPAL +V+CLMLREL+ Sbjct: 325 YIESASGVQAGGRTGLTAVTVAVLFLAALFIAPLAGTVPAYATAPALLYVSCLMLRELLE 384 Query: 364 IDWEDTTECVPAVITALVMPFTYSIANGLALGFISYAGLKLLTGRMKDVSVVIWIIAAIF 423 IDW D TE VPAV+TAL MPFTYS+ANG+A GFISYA LKLLTGR ++V V++WIIAA+F Sbjct: 385 IDWNDVTEVVPAVMTALGMPFTYSVANGVAFGFISYAALKLLTGRARNVPVMVWIIAAVF 444 Query: 424 LFKIIYLGG 432 +FK YL G Sbjct: 445 IFKFYYLPG 453