BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3981.p (386 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004153904.1| hypothetical protein Varpa_1582 [Variovorax ... 492 e-137 ref|YP_004751109.1| hypothetical protein CFU_0449 [Collimonas fu... 452 e-125 ref|YP_002235029.1| hypothetical protein BCAM2427 [Burkholderia ... 413 e-113 ref|YP_001778659.1| hypothetical protein Bcenmc03_5039 [Burkhold... 409 e-112 ref|ZP_03582267.1| conserved hypothetical protein [Burkholderia ... 408 e-112 >ref|YP_004153904.1| hypothetical protein Varpa_1582 [Variovorax paradoxus EPS] gb|ADU35793.1| hypothetical protein Varpa_1582 [Variovorax paradoxus EPS] Length = 378 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 237/378 (62%), Positives = 284/378 (75%), Gaps = 3/378 (0%) Query: 1 MTP---LNIGITIGLQHVGETLWNNGIKQNAVFLAEALRHCSNVGTVTLLNTTNVPVTSD 57 MTP L IGITIGL H ETLWNNGIKQNAVFLAEAL+HC +V +V L+NTT +T Sbjct: 1 MTPSTGLRIGITIGLHHEAETLWNNGIKQNAVFLAEALKHCPSVASVVLVNTTATAITPA 60 Query: 58 LSWDLQRFPTAGFEEAKDGLDVLIELGGQIDAEQTRYLKARGVYLVSYCCGFEYVHSMES 117 L WD R+PT FE AKD +DVLIELGGQID QT YLK RG LVSYCCGFEYVH+MES Sbjct: 61 LPWDQTRWPTVTFEAAKDNVDVLIELGGQIDGAQTDYLKQRGARLVSYCCGFEYVHAMES 120 Query: 118 ILFGGALGNADVFVNRLYDAIWMIPQVENISRSYFEVLRWTPAQVVPFVWSPMFLEQAVA 177 +LF L +++VN+ YD IWM+PQV NIS+ +FEVLR T A+ VPFVWSP+FL++ Sbjct: 121 MLFNKPLWGQNLYVNQRYDDIWMVPQVANISQPFFEVLRRTEARPVPFVWSPVFLDERSR 180 Query: 178 DFPDQGVYRPREGPKRISVMEPNINVTKFCLYPILIAELAHRRDRAAIERLQVTNALDIA 237 PD GVY+PR GP+R+SVMEPNINV KFCLYPIL+AEL++R AI LQVTN+ +A Sbjct: 181 TLPDAGVYQPRSGPRRLSVMEPNINVVKFCLYPILLAELSYRARPDAIALLQVTNSERMA 240 Query: 238 QNSHRFIGLMNQLDIVRDHRAVFMGRHNTPEFLAQSTDVVISHQLENPLNYFYLEVCWQG 297 + + FI LMNQLD+VR H+AVF+GRH TP FLAQ+TD+V+SHQ ENPLNYFYLE CWQG Sbjct: 241 KENMEFIMLMNQLDLVRQHKAVFLGRHETPVFLAQNTDIVVSHQWENPLNYFYLETCWQG 300 Query: 298 YALIHNADLCQDLGYYYPRNDVRAGAEQLRLALASHDLEADRWRQQQRERIHRFLPTNKK 357 Y L+HNA LC DLGYYY NDV AG+ ++ A+ +HD EA +R++QR I R+LP N Sbjct: 301 YPLVHNAHLCADLGYYYRGNDVAAGSARVLEAIDTHDAEATAYRERQRGLIDRYLPGNAA 360 Query: 358 LVRRYEELLGELTARPAR 375 Y +LL L RPAR Sbjct: 361 ATEVYNQLLLGLMQRPAR 378 >ref|YP_004751109.1| hypothetical protein CFU_0449 [Collimonas fungivorans Ter331] gb|AEK60286.1| conserved hypothetical protein [Collimonas fungivorans Ter331] Length = 377 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 212/370 (57%), Positives = 268/370 (72%) Query: 4 LNIGITIGLQHVGETLWNNGIKQNAVFLAEALRHCSNVGTVTLLNTTNVPVTSDLSWDLQ 63 L IGITIGL E+LWNNGIKQNAV+LAE L+ C ++ +V L+NTT V +T+ L WD Sbjct: 6 LRIGITIGLHQENESLWNNGIKQNAVYLAETLKQCPSIASVHLVNTTVVAITAALPWDQA 65 Query: 64 RFPTAGFEEAKDGLDVLIELGGQIDAEQTRYLKARGVYLVSYCCGFEYVHSMESILFGGA 123 R+PT FE+AKD LDVLIELGGQI A+QT YLK +G L+SYCCGFEYVH M+S+LF Sbjct: 66 RWPTVTFEQAKDNLDVLIELGGQISADQTAYLKTQGCRLISYCCGFEYVHVMQSVLFNRP 125 Query: 124 LGNADVFVNRLYDAIWMIPQVENISRSYFEVLRWTPAQVVPFVWSPMFLEQAVADFPDQG 183 + D+FVN+ YDAIWM+PQV S+SYFE LR PAQVVPFVW P+F+ Q F G Sbjct: 126 MWGYDLFVNQRYDAIWMVPQVATNSQSYFETLRRRPAQVVPFVWDPIFVNQRSQGFEHHG 185 Query: 184 VYRPREGPKRISVMEPNINVTKFCLYPILIAELAHRRDRAAIERLQVTNALDIAQNSHRF 243 YRPR GPKR++VMEPN ++ KFC+YP IAE A+R+ +E L VTNA +A+ S F Sbjct: 186 EYRPRSGPKRLTVMEPNNDIVKFCMYPAFIAEEAYRQQPQDVEILHVTNAERLARESKEF 245 Query: 244 IGLMNQLDIVRDHRAVFMGRHNTPEFLAQSTDVVISHQLENPLNYFYLEVCWQGYALIHN 303 I +MNQLDIVR+H+AVF+GR +TP+FL+Q TDVVISHQ+EN LNYFY +VCWQGY L+HN Sbjct: 246 IAVMNQLDIVREHKAVFLGRFDTPQFLSQMTDVVISHQIENALNYFYFDVCWQGYPLVHN 305 Query: 304 ADLCQDLGYYYPRNDVRAGAEQLRLALASHDLEADRWRQQQRERIHRFLPTNKKLVRRYE 363 A +C DLGYYY N+V+ G+ +L L SHD + +QR+ + +LP ++ YE Sbjct: 306 AYMCSDLGYYYEGNNVKEGSRKLLEVLNSHDAGWQDYLARQRQVLSHYLPGCPQVTAEYE 365 Query: 364 ELLGELTARP 373 LL L +P Sbjct: 366 RLLATLLQQP 375 >ref|YP_002235029.1| hypothetical protein BCAM2427 [Burkholderia cenocepacia J2315] emb|CAR56291.1| conserved hypothetical protein [Burkholderia cenocepacia J2315] Length = 380 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 206/375 (54%), Positives = 259/375 (69%), Gaps = 2/375 (0%) Query: 1 MTPLNIGITIGLQHVGETLWNNGIKQNAVFLAEALRHCSNVGTVTLLNTTNVPVTSDLSW 60 +T L IGITIGL+ E+LW NGIKQNA+FLA+ L + VTL+NTT+VP+T L W Sbjct: 6 LTGLRIGITIGLRAPDESLWINGIKQNALFLAKLLMASPHGYRVTLVNTTDVPLTDALPW 65 Query: 61 DLQRFPTAGFEEAKDGLDVLIELGGQIDAEQTRYLKARGVYLVSYCCGFEYVHSMESILF 120 D + T F + KD LDV+IELGGQID EQT YLKARGV LVSYCCG EY+++MES+LF Sbjct: 66 DRSAYDTRAFADMKDALDVVIELGGQIDGEQTAYLKARGVKLVSYCCGVEYINAMESMLF 125 Query: 121 GGALGNADVFVNRLYDAIWMIPQVENISRSYFEVLRWTPAQVVPFVWSPMFLEQAVADFP 180 G L ++ +F+NR YD +W IPQ+ S + + LR P +VVPFVW PMFL + P Sbjct: 126 GRRLWDS-LFINRGYDEVWAIPQIAPSSLPFLQSLRRCPGRVVPFVWDPMFLAERARSLP 184 Query: 181 DQGVYRPREGP-KRISVMEPNINVTKFCLYPILIAELAHRRDRAAIERLQVTNALDIAQN 239 + G YRPR P KR++VMEPN NV KFC+YP+LI + A+RRD AI VTNA +A + Sbjct: 185 EHGEYRPRSEPGKRLTVMEPNHNVVKFCVYPMLIIDEAYRRDPDAICFTHVTNADRLAHD 244 Query: 240 SHRFIGLMNQLDIVRDHRAVFMGRHNTPEFLAQSTDVVISHQLENPLNYFYLEVCWQGYA 299 S F+ LMN LDIVR +A F+GR +TP FLA TD+V+SHQ NPLNYFY +VCWQGY Sbjct: 245 SPEFVMLMNYLDIVRAGKASFVGRFDTPLFLADLTDIVVSHQWSNPLNYFYFDVCWQGYP 304 Query: 300 LIHNADLCQDLGYYYPRNDVRAGAEQLRLALASHDLEADRWRQQQRERIHRFLPTNKKLV 359 L+HNA L DLGYYYP NDV+ GA+ L AL +HD + + ++QRE + R+ N LV Sbjct: 305 LVHNASLAPDLGYYYPDNDVQQGADALLRALHTHDDDWQAYTRRQREILGRYTSANPALV 364 Query: 360 RRYEELLGELTARPA 374 Y+ LL L PA Sbjct: 365 AEYDALLANLIGAPA 379 >ref|YP_001778659.1| hypothetical protein Bcenmc03_5039 [Burkholderia cenocepacia MC0-3] gb|ACA94169.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3] Length = 380 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 205/375 (54%), Positives = 259/375 (69%), Gaps = 2/375 (0%) Query: 1 MTPLNIGITIGLQHVGETLWNNGIKQNAVFLAEALRHCSNVGTVTLLNTTNVPVTSDLSW 60 +T L IGITIGL+ E+LW NGIKQNA+FLA+ L + VTL+NTT+VP+T L W Sbjct: 6 LTGLRIGITIGLRTPDESLWINGIKQNALFLAKLLMASPHGYRVTLVNTTDVPLTDALPW 65 Query: 61 DLQRFPTAGFEEAKDGLDVLIELGGQIDAEQTRYLKARGVYLVSYCCGFEYVHSMESILF 120 D F T F + KD LDV+IELGGQID EQT YLKARGV LVSYCCG EY+++MES+LF Sbjct: 66 DRNVFDTRAFADMKDALDVVIELGGQIDGEQTAYLKARGVKLVSYCCGVEYINAMESMLF 125 Query: 121 GGALGNADVFVNRLYDAIWMIPQVENISRSYFEVLRWTPAQVVPFVWSPMFLEQAVADFP 180 G L ++ +F+NR YD +W IPQ+ S + + LR P +VVPFVW PMFL + P Sbjct: 126 GRRLWDS-LFINRGYDEVWAIPQIAPSSLPFLQSLRRCPGRVVPFVWDPMFLTERARSLP 184 Query: 181 DQGVYRPREGP-KRISVMEPNINVTKFCLYPILIAELAHRRDRAAIERLQVTNALDIAQN 239 + G YRPR P KR++VMEPN +V KFC+YP+LI + A+RRD AI VTNA +A + Sbjct: 185 EHGEYRPRGEPGKRLTVMEPNHDVVKFCVYPMLIIDEAYRRDPDAICFTHVTNADRLAHD 244 Query: 240 SHRFIGLMNQLDIVRDHRAVFMGRHNTPEFLAQSTDVVISHQLENPLNYFYLEVCWQGYA 299 S F+ LMN LDIVR +A F+GR +TP FLA TD+V+SHQ NPLNYFY +VCWQGY Sbjct: 245 SPEFVMLMNYLDIVRAGKASFVGRFDTPLFLADLTDIVVSHQWSNPLNYFYFDVCWQGYP 304 Query: 300 LIHNADLCQDLGYYYPRNDVRAGAEQLRLALASHDLEADRWRQQQRERIHRFLPTNKKLV 359 L+HNA L DLGYYYP NDV+ GA+ L AL +HD + + ++QRE + R+ +N LV Sbjct: 305 LVHNASLAPDLGYYYPDNDVQQGADALLRALHTHDHDWQAYARRQREILGRYTSSNPALV 364 Query: 360 RRYEELLGELTARPA 374 Y+ LL L A Sbjct: 365 AEYDALLANLIGATA 379 >ref|ZP_03582267.1| conserved hypothetical protein [Burkholderia multivorans CGD1] gb|EEE02440.1| conserved hypothetical protein [Burkholderia multivorans CGD1] Length = 403 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 208/373 (55%), Positives = 259/373 (69%), Gaps = 3/373 (0%) Query: 4 LNIGITIGLQHVGETLWNNGIKQNAVFLAEALRHCSNVGTVTLLNTTNVPVTSDLSWDLQ 63 L IGITIGL+ E+LW NGIKQNA+FLA+ L + VTL+NTT VP+T L WD + Sbjct: 32 LRIGITIGLRTPDESLWINGIKQNALFLAKLLMASPHGYRVTLVNTTAVPLTDALPWDRR 91 Query: 64 RFPTAGFEEAKDGLDVLIELGGQIDAEQTRYLKARGVYLVSYCCGFEYVHSMESILFGGA 123 F T F + KD LDVLIELGGQIDAEQT YLKARG +VSYCCG EY+++MESILFG Sbjct: 92 VFDTRAFADMKDALDVLIELGGQIDAEQTAYLKARGAKIVSYCCGVEYINAMESILFGRR 151 Query: 124 LGNADVFVNRLYDAIWMIPQVENISRSYFEVLRWTPAQVVPFVWSPMFLEQAVADFPDQG 183 L + +F+NR YD +W IPQ+ S + + LR P +VVPFVW PMFL + P+ G Sbjct: 152 LWDT-LFINRGYDEVWAIPQIAPSSLPFLQSLRRCPGRVVPFVWDPMFLTERAQSLPEHG 210 Query: 184 VYRPR-EGPKRISVMEPNINVTKFCLYPILIAELAHRRDRAAIERLQVTNALDIAQNSHR 242 YRPR E KR++VMEPN +V KFC+YP+LI + A+RRD AI VTNA +A S Sbjct: 211 EYRPRGERGKRLTVMEPNHDVVKFCVYPMLIIDEAYRRDPDAIAFTHVTNAERLAHESPE 270 Query: 243 FIGLMNQLDIVRDHRAVFMGRHNTPEFLAQSTDVVISHQLENPLNYFYLEVCWQGYALIH 302 F+ LMN LDIVR +A F+GR +TP FLA+ TDVV+SHQ NPLNYFY +VCWQGY L+H Sbjct: 271 FVMLMNYLDIVRAGKASFVGRFDTPVFLAELTDVVVSHQWSNPLNYFYFDVCWQGYPLVH 330 Query: 303 NADLCQDLGYYYPRNDVRAGAEQLRLALASHDLEADRWRQQQRERIHRFLPTNKKLVRRY 362 NA L DLGYYYP NDV+ GA+ L AL +HD + + + ++QRE + R+ + LV Y Sbjct: 331 NASLAPDLGYYYPDNDVQQGADALLRALHAHDDDWEAYTRRQREILRRYTSASPALVAEY 390 Query: 363 EELLGELT-ARPA 374 + LL LT AR A Sbjct: 391 DALLANLTGARTA 403