BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3973.p (351 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777956.1| enzyme involved in meta-pathway of phenol de... 562 e-158 ref|YP_003749188.1| hypothetical protein RPSI07_mp0184 [Ralstoni... 434 e-119 emb|CAQ18063.1| cog4313, protein involved in meta-pathway of phe... 427 e-117 ref|ZP_00944030.1| Hypothetical Protein RRSL_03718 [Ralstonia so... 426 e-117 gb|AEG70863.1| protein involved in meta-pathway of phenol degrad... 425 e-117 >ref|YP_003777956.1| enzyme involved in meta-pathway of phenol degradation protein [Herbaspirillum seropedicae SmR1] gb|ADJ66048.1| enzyme involved in meta-pathway of phenol degradation protein [Herbaspirillum seropedicae SmR1] Length = 316 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 274/294 (93%), Positives = 290/294 (98%) Query: 58 YDQPAVNMGGTSFFDGAPLPGGPGFYFVEYLTYTKATKLVDNNGNRLGFPATQDISVFAP 117 YDQP VNMGGTSFFDGAPLPGGPGFYFVEYLTY+KATKLVDNNGNRLGFPATQDISVFAP Sbjct: 23 YDQPTVNMGGTSFFDGAPLPGGPGFYFVEYLTYSKATKLVDNNGNRLGFPATQDISVFAP 82 Query: 118 ISQFIYVPPGAKFGNKQLGFQVLVPWVANAKVDDGANNAILRGNTGIGDISAGVSVQYDP 177 ++QFIYVPPGAKFGNKQLGFQVLVPWVA+AKVDDGANNA+LRGNTGIGDISAGVSVQYDP Sbjct: 83 VTQFIYVPPGAKFGNKQLGFQVLVPWVASAKVDDGANNAVLRGNTGIGDISAGVSVQYDP 142 Query: 178 VMGAQGPLYSQRFELQFILPTGAYDRNATVNPGSNTWSFDPYWAGTLWASQNLSFSWRLH 237 +MGAQGPLY+QRFELQFILPTGAYDRNATVNPGSNTW+FDPYWAGTLWASQNLSFSWRLH Sbjct: 143 IMGAQGPLYAQRFELQFILPTGAYDRNATVNPGSNTWAFDPYWAGTLWASQNLSFSWRLH 202 Query: 238 YLWNARNNSPNAAFGNNVSSTQAGQAVHANFSAEYVLNPTLTIGAAGYWLQQITDTKVNG 297 YLWNARNN+P+AAFGNNVSSTQAGQA HANF+AEYVLNPT T+GAAGYWLQQ+TDTKVNG Sbjct: 203 YLWNARNNAPSAAFGNNVSSTQAGQAAHANFAAEYVLNPTWTVGAAGYWLQQVTDTKVNG 262 Query: 298 SDVGGRRERVVGLGPAAMVRLSERDLLFFNVYQEFAVRNRAENSKFQVRYDHHF 351 +DV GRRERVVGLGPAAM+RLSERDLLFFNVYQEFAVRNRAENSKFQ+RYDHHF Sbjct: 263 ADVSGRRERVVGLGPAAMMRLSERDLLFFNVYQEFAVRNRAENSKFQIRYDHHF 316 >ref|YP_003749188.1| hypothetical protein RPSI07_mp0184 [Ralstonia solanacearum PSI07] emb|CBJ34542.1| conserved exported protein of unknown function, predicted protein involved in meta-pathway of phenol degradation [Ralstonia solanacearum PSI07] Length = 315 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 211/311 (67%), Positives = 248/311 (79%), Gaps = 2/311 (0%) Query: 43 TALLAATL--CPGLASAYDQPAVNMGGTSFFDGAPLPGGPGFYFVEYLTYTKATKLVDNN 100 T LLAA L C A AYDQP+VNMGGTSFFDGAPLPGGPGFYFVEYL++ A++++DN Sbjct: 5 TTLLAACLSACACTAWAYDQPSVNMGGTSFFDGAPLPGGPGFYFVEYLSHYSASRMMDNG 64 Query: 101 GNRLGFPATQDISVFAPISQFIYVPPGAKFGNKQLGFQVLVPWVANAKVDDGANNAILRG 160 GN FP +Q V P+SQ IYVP GAK+GNKQLGFQ+L+PWVA A++DDG NA+L+G Sbjct: 65 GNTAAFPPSQKFDVTVPVSQLIYVPEGAKWGNKQLGFQLLLPWVAQARIDDGMGNAVLKG 124 Query: 161 NTGIGDISAGVSVQYDPVMGAQGPLYSQRFELQFILPTGAYDRNATVNPGSNTWSFDPYW 220 GIGD++AGVS+Q+DP+MG QGPL+SQRFELQ I PTG YDR A V+PGSN WSFDPYW Sbjct: 125 ARGIGDLAAGVSLQFDPIMGEQGPLFSQRFELQVIAPTGHYDRTAAVSPGSNFWSFDPYW 184 Query: 221 AGTLWASQNLSFSWRLHYLWNARNNSPNAAFGNNVSSTQAGQAVHANFSAEYVLNPTLTI 280 A T WAS LSFS R +YLWNARNN PNAAFGN +STQAGQA+H NF+ EY + L Sbjct: 185 AVTAWASPKLSFSGRFNYLWNARNNDPNAAFGNGATSTQAGQALHGNFAVEYEIRQGLVA 244 Query: 281 GAAGYWLQQITDTKVNGSDVGGRRERVVGLGPAAMVRLSERDLLFFNVYQEFAVRNRAEN 340 G +GYWL+QI+DT+VNG V GRRE+VV LGPAAMV LS +D LFFN Y+EFAVRNR + Sbjct: 245 GLSGYWLKQISDTRVNGVAVPGRREQVVALGPAAMVALSPKDFLFFNYYKEFAVRNRPKG 304 Query: 341 SKFQVRYDHHF 351 KFQ+RYDHHF Sbjct: 305 DKFQIRYDHHF 315 >emb|CAQ18063.1| cog4313, protein involved in meta-pathway of phenol degradation [Ralstonia solanacearum MolK2] Length = 315 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 207/311 (66%), Positives = 246/311 (79%), Gaps = 2/311 (0%) Query: 43 TALLAATL--CPGLASAYDQPAVNMGGTSFFDGAPLPGGPGFYFVEYLTYTKATKLVDNN 100 T LLAA L C A AYDQP+VNMGGTSFFDGAPLPGGPGFYFVEYLT+ A++++DN+ Sbjct: 5 TTLLAACLGACACTAWAYDQPSVNMGGTSFFDGAPLPGGPGFYFVEYLTHYSASRMMDNS 64 Query: 101 GNRLGFPATQDISVFAPISQFIYVPPGAKFGNKQLGFQVLVPWVANAKVDDGANNAILRG 160 GN FP +Q + P+SQ IYVP GA++GNKQLGFQ L+PWVA A+VDDG NA+L+G Sbjct: 65 GNTAAFPPSQKFDLTVPVSQLIYVPEGARWGNKQLGFQALLPWVAQARVDDGMGNAVLKG 124 Query: 161 NTGIGDISAGVSVQYDPVMGAQGPLYSQRFELQFILPTGAYDRNATVNPGSNTWSFDPYW 220 GIGD++AGV +Q+DP+MGAQGPL+SQRFELQ I PTG YDR A V+PGS+ WSFDPYW Sbjct: 125 ARGIGDLAAGVWLQFDPIMGAQGPLFSQRFELQVIAPTGHYDRTAAVSPGSHFWSFDPYW 184 Query: 221 AGTLWASQNLSFSWRLHYLWNARNNSPNAAFGNNVSSTQAGQAVHANFSAEYVLNPTLTI 280 A T+WAS LSFS R +YLWNARN PN AFGN +STQAGQA+H NF+ EY + L Sbjct: 185 AVTVWASPKLSFSGRFNYLWNARNGDPNVAFGNGATSTQAGQALHGNFAVEYEIRQGLVA 244 Query: 281 GAAGYWLQQITDTKVNGSDVGGRRERVVGLGPAAMVRLSERDLLFFNVYQEFAVRNRAEN 340 G +GYWL+QI+DT+VNG V GRRE+VV LGPAAMV LS +D LFFN Y+EFA RNR + Sbjct: 245 GLSGYWLKQISDTRVNGVAVPGRREQVVALGPAAMVALSPKDFLFFNYYKEFAARNRTQG 304 Query: 341 SKFQVRYDHHF 351 KFQ+RYDHHF Sbjct: 305 DKFQIRYDHHF 315 >ref|ZP_00944030.1| Hypothetical Protein RRSL_03718 [Ralstonia solanacearum UW551] ref|YP_002257182.1| cog4313, protein involved in meta-pathway of phenol degradation [Ralstonia solanacearum IPO1609] gb|EAP73536.1| Hypothetical Protein RRSL_03718 [Ralstonia solanacearum UW551] emb|CAQ59063.1| cog4313, protein involved in meta-pathway of phenol degradation [Ralstonia solanacearum IPO1609] Length = 315 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 207/311 (66%), Positives = 246/311 (79%), Gaps = 2/311 (0%) Query: 43 TALLAATL--CPGLASAYDQPAVNMGGTSFFDGAPLPGGPGFYFVEYLTYTKATKLVDNN 100 T LLAA L C A AYDQP+VNMGGTSFFDGAPLPGGPGFYFVEYLT+ A++++DN+ Sbjct: 5 TTLLAACLGACACTAWAYDQPSVNMGGTSFFDGAPLPGGPGFYFVEYLTHYSASRMMDNS 64 Query: 101 GNRLGFPATQDISVFAPISQFIYVPPGAKFGNKQLGFQVLVPWVANAKVDDGANNAILRG 160 GN FP +Q + P+SQ IYVP GA++GNKQLGFQ L+PWVA A+VDDG NA+L+G Sbjct: 65 GNTAAFPPSQKFDLTVPVSQLIYVPEGARWGNKQLGFQALLPWVAQARVDDGMGNAVLKG 124 Query: 161 NTGIGDISAGVSVQYDPVMGAQGPLYSQRFELQFILPTGAYDRNATVNPGSNTWSFDPYW 220 GIGD++AGV +Q+DP+MGAQGPL+SQRFELQ I PTG YDR A V+PGS+ WSFDPYW Sbjct: 125 ARGIGDLAAGVWLQFDPIMGAQGPLFSQRFELQVIAPTGHYDRTAAVSPGSHFWSFDPYW 184 Query: 221 AGTLWASQNLSFSWRLHYLWNARNNSPNAAFGNNVSSTQAGQAVHANFSAEYVLNPTLTI 280 A T+WAS LSFS R +YLWNARN PN AFGN +STQAGQA+H NF+ EY + L Sbjct: 185 AVTVWASPKLSFSGRFNYLWNARNGDPNVAFGNGATSTQAGQALHGNFAVEYEIRQGLVA 244 Query: 281 GAAGYWLQQITDTKVNGSDVGGRRERVVGLGPAAMVRLSERDLLFFNVYQEFAVRNRAEN 340 G +GYWL+QI+DT+VNG V GRRE+VV LGPAAMV LS +D LFFN Y+EFA RNR + Sbjct: 245 GLSGYWLKQISDTRVNGVAVPGRREQVVALGPAAMVALSPKDFLFFNYYREFAARNRTQG 304 Query: 341 SKFQVRYDHHF 351 KFQ+RYDHHF Sbjct: 305 DKFQIRYDHHF 315 >gb|AEG70863.1| protein involved in meta-pathway of phenol degradation [Ralstonia solanacearum Po82] Length = 315 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 206/311 (66%), Positives = 246/311 (79%), Gaps = 2/311 (0%) Query: 43 TALLAATL--CPGLASAYDQPAVNMGGTSFFDGAPLPGGPGFYFVEYLTYTKATKLVDNN 100 T LLAA L C A AYDQP+VNMGGTSFFDGAPLPGGPGFYFVEYLT+ A++++DN+ Sbjct: 5 TTLLAACLGACACTAWAYDQPSVNMGGTSFFDGAPLPGGPGFYFVEYLTHYSASRMMDNS 64 Query: 101 GNRLGFPATQDISVFAPISQFIYVPPGAKFGNKQLGFQVLVPWVANAKVDDGANNAILRG 160 GN FP +Q + P+SQ IYVP GA++GNKQLGFQ L+PWVA A+VDDG NA+L+G Sbjct: 65 GNTAAFPPSQKFDLTVPVSQLIYVPEGARWGNKQLGFQALLPWVAQARVDDGMGNAVLKG 124 Query: 161 NTGIGDISAGVSVQYDPVMGAQGPLYSQRFELQFILPTGAYDRNATVNPGSNTWSFDPYW 220 GIGD++AGV +Q+DP+MGAQGPL+SQRFELQ I PTG YDR A V+PGS+ WSFDPYW Sbjct: 125 ARGIGDLAAGVWLQFDPIMGAQGPLFSQRFELQVIAPTGHYDRTAAVSPGSHFWSFDPYW 184 Query: 221 AGTLWASQNLSFSWRLHYLWNARNNSPNAAFGNNVSSTQAGQAVHANFSAEYVLNPTLTI 280 A T+WAS LSFS R +YLWNARN P+ AFGN +STQAGQA+H NF+ EY + L Sbjct: 185 AVTVWASPKLSFSGRFNYLWNARNGDPSVAFGNGATSTQAGQALHGNFAVEYEIRQGLVA 244 Query: 281 GAAGYWLQQITDTKVNGSDVGGRRERVVGLGPAAMVRLSERDLLFFNVYQEFAVRNRAEN 340 G +GYWL+QI+DT+VNG V GRRE+VV LGPAAMV LS +D LFFN Y+EFA RNR + Sbjct: 245 GLSGYWLKQISDTRVNGVAVPGRREQVVALGPAAMVALSPKDFLFFNYYKEFAARNRTQG 304 Query: 341 SKFQVRYDHHF 351 KFQ+RYDHHF Sbjct: 305 DKFQIRYDHHF 315