BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3965.p (349 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777949.1| bifunctional NMN adenylyltransferase/nudix h... 598 e-169 ref|YP_002552159.1| cytidyltransferase-like domain-containing pr... 368 e-100 ref|YP_985021.1| cytidyltransferase-like protein [Acidovorax sp.... 368 e-99 ref|YP_004233437.1| cytidyltransferase-like domain-containing pr... 358 1e-96 ref|YP_969346.1| cytidyltransferase-like protein [Acidovorax cit... 353 2e-95 >ref|YP_003777949.1| bifunctional NMN adenylyltransferase/nudix hydrolase [Herbaspirillum seropedicae SmR1] gb|ADJ66041.1| bifunctional NMN adenylyltransferase/nudix hydrolase protein [Herbaspirillum seropedicae SmR1] Length = 349 Score = 598 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 333/349 (95%), Positives = 337/349 (96%) Query: 1 MPVLTPQYDAAVVIGRFQPVHNGHLHLLHHALERAATVIVVLGSAFHARNTKNPFTWEER 60 MP+LTPQYDAAVVIGRFQPVHNGHLHLLHHALERAA VIVVLGSAFHARNTKNPFTWEER Sbjct: 1 MPILTPQYDAAVVIGRFQPVHNGHLHLLHHALERAAMVIVVLGSAFHARNTKNPFTWEER 60 Query: 61 AAMIAGAMPPGQRERLRFVATRDYYDDRRWSAEVRRLVAAETDPQGRVLLVGHFKDASSY 120 AAMIAGAMPPGQRERLRFVATRDYYDDRRWSAEVRR VAAE Q RVLLVGHFKDASSY Sbjct: 61 AAMIAGAMPPGQRERLRFVATRDYYDDRRWSAEVRRQVAAEAGSQARVLLVGHFKDASSY 120 Query: 121 YLRHFPQWQLETLPRAGDIDATDIRNVWFEAEDLEVSLDVLDTMVPPSVRHYLRAWSLLP 180 YLRHFPQWQLETL RAGDIDATDIR VWFEA+DLEVSLDVL MVPPSVRHYLRAWSLLP Sbjct: 121 YLRHFPQWQLETLERAGDIDATDIRQVWFEADDLEVSLDVLAPMVPPSVRHYLRAWSLLP 180 Query: 181 HYAALVEEHRQLRKYQAAWAAAPYPPVFTTVDAVIRAADHVLLVQRKGFPGRGLWAIPGG 240 HYAALVEEHRQLRKYQAAWAAAPYPPVFTTVDAVIRAADHVLLVQRKGFPGRGLWAIPGG Sbjct: 181 HYAALVEEHRQLRKYQAAWAAAPYPPVFTTVDAVIRAADHVLLVQRKGFPGRGLWAIPGG 240 Query: 241 FLDQRERLMQAALRELAEETNLAVLDVTLEEALVDVKIFDHPDRSARGRTITHAYYFDLR 300 FLDQRERLMQAALRELAEETNLAVLDVTLEEALVDVKIFDHPDRSARGRTITHAYYFDLR Sbjct: 241 FLDQRERLMQAALRELAEETNLAVLDVTLEEALVDVKIFDHPDRSARGRTITHAYYFDLR 300 Query: 301 LEQLPEVEAADDAAQAVWTPIAQLAAMEASFFDDHFHILDTFLNLTGSE 349 LE LPEVEAADDAAQAVWTPI QLAAMEASFFDDHFHILDTFLNLTG++ Sbjct: 301 LEHLPEVEAADDAAQAVWTPIDQLAAMEASFFDDHFHILDTFLNLTGTD 349 >ref|YP_002552159.1| cytidyltransferase-like domain-containing protein [Acidovorax ebreus TPSY] gb|ACM32159.1| cytidyltransferase-related domain protein [Acidovorax ebreus TPSY] Length = 344 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 197/341 (57%), Positives = 241/341 (70%), Gaps = 2/341 (0%) Query: 8 YDAAVVIGRFQPVHNGHLHLLHHALERAATVIVVLGSAFHARNTKNPFTWEERAAMIAGA 67 YD A++IGRF+PVH GHL LL AL +A VIV++GSAF AR KNPFTW ER AM+ GA Sbjct: 2 YDTAILIGRFEPVHTGHLALLREALVQARQVIVIVGSAFQARTPKNPFTWHEREAMLRGA 61 Query: 68 MPPGQRERLRFVATRDYYDDRRWSAEVRRLVAAETDPQGRVLLVGHFKDASSYYLRHFPQ 127 +P G R RL + RDYY++ W VR VA + PQ RV LVGHFKDA+S YL FP Sbjct: 62 LPEGDRTRLTVLPVRDYYNEAVWVEAVRNAVARHSPPQARVGLVGHFKDATSSYLSAFPG 121 Query: 128 WQLETLPRAGDIDATDIRNVWFEAEDLEVS--LDVLDTMVPPSVRHYLRAWSLLPHYAAL 185 W+L + R G IDAT IR+ +F A V+ L L M+PP+ + L ++ PH+A L Sbjct: 122 WELIRMERQGRIDATAIRDAYFGATPATVAHALQPLAPMLPPATQALLEQFAHTPHFATL 181 Query: 186 VEEHRQLRKYQAAWAAAPYPPVFTTVDAVIRAADHVLLVQRKGFPGRGLWAIPGGFLDQR 245 +E + LR Y+AAWA APYPPVF TVDAV+R DHVLL++R PGRGL A+PGGF++QR Sbjct: 182 QQEWQMLRGYRAAWATAPYPPVFVTVDAVLRCQDHVLLIRRAHAPGRGLLAVPGGFIEQR 241 Query: 246 ERLMQAALRELAEETNLAVLDVTLEEALVDVKIFDHPDRSARGRTITHAYYFDLRLEQLP 305 E L Q+ LRELAEETN A+ + TL AL V +FDHPDRS RGRTITHA+YFDL+ LP Sbjct: 242 ETLWQSCLRELAEETNCALPEATLRAALRSVTVFDHPDRSQRGRTITHAHYFDLQDAPLP 301 Query: 306 EVEAADDAAQAVWTPIAQLAAMEASFFDDHFHILDTFLNLT 346 V+AADDAA A W I +LA ME +FF+DHFH+LD FL LT Sbjct: 302 PVQAADDAAHAEWVAIDRLAGMEEAFFEDHFHMLDHFLRLT 342 >ref|YP_985021.1| cytidyltransferase-like protein [Acidovorax sp. JS42] gb|ABM40945.1| cytidyltransferase-related domain protein [Acidovorax sp. JS42] Length = 344 Score = 368 bits (944), Expect = e-99, Method: Composition-based stats. Identities = 197/341 (57%), Positives = 241/341 (70%), Gaps = 2/341 (0%) Query: 8 YDAAVVIGRFQPVHNGHLHLLHHALERAATVIVVLGSAFHARNTKNPFTWEERAAMIAGA 67 YD A++IGRF+PVH GHL LL AL +A VIV++GSAF AR KNPFTW ER AM+ GA Sbjct: 2 YDTAILIGRFEPVHTGHLALLREALVQARQVIVIVGSAFQARTPKNPFTWHEREAMLRGA 61 Query: 68 MPPGQRERLRFVATRDYYDDRRWSAEVRRLVAAETDPQGRVLLVGHFKDASSYYLRHFPQ 127 +P G R RL + RDYY++ W VR VA + PQ RV LVGHFKDA+S YL FP Sbjct: 62 LPEGDRTRLTVLPVRDYYNEAVWVEAVRNAVARHSPPQARVGLVGHFKDATSGYLSAFPG 121 Query: 128 WQLETLPRAGDIDATDIRNVWFEAEDLEVS--LDVLDTMVPPSVRHYLRAWSLLPHYAAL 185 W+L + R G IDAT IR+ +F A V+ L L M+PP+ + L ++ PH+A L Sbjct: 122 WELIRMERQGRIDATAIRDAYFGATPATVAHALQPLAPMLPPATQALLEQFAHTPHFATL 181 Query: 186 VEEHRQLRKYQAAWAAAPYPPVFTTVDAVIRAADHVLLVQRKGFPGRGLWAIPGGFLDQR 245 +E + LR Y+AAWA APYPPVF TVDAV+R DHVLL++R PGRGL A+PGGF++QR Sbjct: 182 QQEWQMLRGYRAAWATAPYPPVFVTVDAVLRCQDHVLLIRRAHAPGRGLLAVPGGFIEQR 241 Query: 246 ERLMQAALRELAEETNLAVLDVTLEEALVDVKIFDHPDRSARGRTITHAYYFDLRLEQLP 305 E L Q+ LRELAEETN A+ + TL AL V +FDHPDRS RGRTITHA+YFDL+ LP Sbjct: 242 ETLWQSCLRELAEETNCALPEATLRAALRSVTVFDHPDRSQRGRTITHAHYFDLQDAPLP 301 Query: 306 EVEAADDAAQAVWTPIAQLAAMEASFFDDHFHILDTFLNLT 346 V+AADDAA A W I +LA ME +FF+DHFH+LD FL LT Sbjct: 302 PVQAADDAAHAEWVAIDRLAGMEEAFFEDHFHMLDHFLRLT 342 >ref|YP_004233437.1| cytidyltransferase-like domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX44870.1| cytidyltransferase-related domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 348 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 191/341 (56%), Positives = 238/341 (69%), Gaps = 2/341 (0%) Query: 8 YDAAVVIGRFQPVHNGHLHLLHHALERAATVIVVLGSAFHARNTKNPFTWEERAAMIAGA 67 YD A++IGRF+PVHNGHL LL AL+ A IV++GSA+ AR+ KNPFTW+ER AM+ A Sbjct: 2 YDNAILIGRFEPVHNGHLALLRCALDSAHHAIVIMGSAWQARSPKNPFTWQEREAMLRNA 61 Query: 68 MPPGQRERLRFVATRDYYDDRRWSAEVRRLVAAETDPQGRVLLVGHFKDASSYYLRHFPQ 127 +P R RL + RD+Y++ W A V + VA P R+ LVGHFKDA+S YLR FP Sbjct: 62 LPVADRARLTVLPVRDHYNELAWVAAVLQAVARHVRPDARIGLVGHFKDATSSYLRRFPG 121 Query: 128 WQLETLPRAGDIDATDIRNVWFEA--EDLEVSLDVLDTMVPPSVRHYLRAWSLLPHYAAL 185 WQL + R G IDAT IR+ +F A + L +L L VP S +LRA++ PHYAAL Sbjct: 122 WQLIAVERQGSIDATAIRDAYFGATPDTLLAALGPLAEQVPDSTIDFLRAFAQAPHYAAL 181 Query: 186 VEEHRQLRKYQAAWAAAPYPPVFTTVDAVIRAADHVLLVQRKGFPGRGLWAIPGGFLDQR 245 EE R LR Y+ AWA APYPPVF TVDAV+R DHVLL++R PG+G A PGGF++QR Sbjct: 182 QEEWRMLRGYREAWAKAPYPPVFVTVDAVLRCQDHVLLIRRAHAPGKGQLAAPGGFIEQR 241 Query: 246 ERLMQAALRELAEETNLAVLDVTLEEALVDVKIFDHPDRSARGRTITHAYYFDLRLEQLP 305 E + Q+ LRELAEET+ + + + AL +V +FDHPDRS RGRTITHA+YFDL E P Sbjct: 242 ETVWQSCLRELAEETHCTLPEARMRAALREVAVFDHPDRSQRGRTITHAHYFDLEGEPFP 301 Query: 306 EVEAADDAAQAVWTPIAQLAAMEASFFDDHFHILDTFLNLT 346 +V A DDAAQ W PI LAA+E +FF+DHFH+LD FL LT Sbjct: 302 DVRADDDAAQVEWFPITALAALEEAFFEDHFHMLDHFLGLT 342 >ref|YP_969346.1| cytidyltransferase-like protein [Acidovorax citrulli AAC00-1] gb|ABM31572.1| cytidyltransferase-related domain protein [Acidovorax citrulli AAC00-1] Length = 348 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 190/341 (55%), Positives = 241/341 (70%), Gaps = 2/341 (0%) Query: 8 YDAAVVIGRFQPVHNGHLHLLHHALERAATVIVVLGSAFHARNTKNPFTWEERAAMIAGA 67 YD A++IGRF+PVHNGHL LL AL+ A IV++GSA+ AR+ KNPFTW+ER AM+ A Sbjct: 2 YDNAILIGRFEPVHNGHLALLRRALDSARHAIVIMGSAWQARSPKNPFTWQEREAMLRNA 61 Query: 68 MPPGQRERLRFVATRDYYDDRRWSAEVRRLVAAETDPQGRVLLVGHFKDASSYYLRHFPQ 127 +P R RL + RD+Y++ W A V + V+ P R+ LVGHFKDA+S YLR FP Sbjct: 62 LPEADRARLTVLPVRDHYNELAWVAAVLQAVSRHVRPDARIGLVGHFKDATSSYLRRFPG 121 Query: 128 WQLETLPRAGDIDATDIRNVWFEA--EDLEVSLDVLDTMVPPSVRHYLRAWSLLPHYAAL 185 WQL + R G IDAT IR+ +F A + L +L +L +P S +LRA++ PHYAAL Sbjct: 122 WQLIAVERQGSIDATAIRDAYFGATPDTLLAALGLLAEQMPDSTIDFLRAFAQAPHYAAL 181 Query: 186 VEEHRQLRKYQAAWAAAPYPPVFTTVDAVIRAADHVLLVQRKGFPGRGLWAIPGGFLDQR 245 EE R LR Y+ AWA APYPPVF TVDAV+R DHVLL++R PG+G A PGGF++QR Sbjct: 182 QEEWRMLRDYREAWAKAPYPPVFVTVDAVLRCQDHVLLIRRAHAPGKGQLAAPGGFIEQR 241 Query: 246 ERLMQAALRELAEETNLAVLDVTLEEALVDVKIFDHPDRSARGRTITHAYYFDLRLEQLP 305 E + Q+ LRELAEET+ A+ + + AL +V +FDHPDRS RGRTITHA+YFDL + P Sbjct: 242 ETVWQSCLRELAEETHCALPEARMRAALREVAVFDHPDRSQRGRTITHAHYFDLEGDPFP 301 Query: 306 EVEAADDAAQAVWTPIAQLAAMEASFFDDHFHILDTFLNLT 346 +V A DDAAQ W PI QLAA+E +FF+DHFH+LD FL LT Sbjct: 302 DVRADDDAAQVEWFPITQLAALEEAFFEDHFHMLDHFLGLT 342