BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3951.p (316 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777937.1| hypothetical protein Hsero_4563 [Herbaspiril... 425 e-117 ref|YP_003740581.1| hypothetical protein EbC_11980 [Erwinia bill... 283 3e-74 ref|YP_003933302.1| hypothetical protein Pvag_3737 [Pantoea vaga... 281 1e-73 ref|ZP_07378293.1| Gluconate 2-dehydrogenase (acceptor) [Pantoea... 279 3e-73 ref|YP_004114424.1| hypothetical protein Pat9b_0543 [Pantoea sp.... 268 8e-70 >ref|YP_003777937.1| hypothetical protein Hsero_4563 [Herbaspirillum seropedicae SmR1] gb|ADJ66029.1| exported protein [Herbaspirillum seropedicae SmR1] Length = 237 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 224/237 (94%), Positives = 231/237 (97%) Query: 80 MTTKFSPSRRAVLAATAAAVPLVSLPLLKQARADGLEGIELQHYKPVFFNAAQWLFILAA 139 MT+KFSPSRRAVLAATAAAVPLVS+PLLK+A+ADGLEGIELQHYKPVFFN AQWLFILAA Sbjct: 1 MTSKFSPSRRAVLAATAAAVPLVSIPLLKEAQADGLEGIELQHYKPVFFNPAQWLFILAA 60 Query: 140 CDRLIPAEGRGPGALETNVPVFIDQQLHAGLGSDIYQQGPHQTDAPATLGFQIPYAPQDV 199 CDRLIPAEGRGPGALETNVPVFIDQQLHAGLGSDIYQQGPHQ DAPATLGFQIPYAPQDV Sbjct: 61 CDRLIPAEGRGPGALETNVPVFIDQQLHAGLGSDIYQQGPHQPDAPATLGFQIPYAPQDV 120 Query: 200 YRIGIDLTQQISQQQHGKRFEQLDAKDKDALLTSLQKNAADFAALGEKAMKPSQFFGQLL 259 YRIGI LTQQISQQQHGK FEQLDAKDKDALLT+LQKN DFAALGEK+M+PSQFFGQLL Sbjct: 121 YRIGITLTQQISQQQHGKPFEQLDAKDKDALLTALQKNGVDFAALGEKSMRPSQFFGQLL 180 Query: 260 GDTKNGYLADPMYGGNKDMKAWVAIGFPGARAAYTEWVDQHNVKYPLGPVSLSGKRA 316 GDTKNGYLADPMYGGNKDMKAWVAIGFPGARAAYTEWVDQHNVKYPLGPVSLSGKRA Sbjct: 181 GDTKNGYLADPMYGGNKDMKAWVAIGFPGARAAYTEWVDQHNVKYPLGPVSLSGKRA 237 >ref|YP_003740581.1| hypothetical protein EbC_11980 [Erwinia billingiae Eb661] emb|CAX58729.1| Putative exported protein [Erwinia billingiae Eb661] Length = 241 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 140/234 (59%), Positives = 174/234 (74%), Gaps = 4/234 (1%) Query: 87 SRRAVLAATAAAVPLVSLPL--LKQARADGLEGIELQHYKPVFFNAAQWLFILAACDRLI 144 +RR L + A+PL + L + A+A + EL YKP+FF+A +W FI+AACDRLI Sbjct: 8 TRRKFLIGSLLALPLGDMVLKGITAAQAAEMAAPELVDYKPIFFSADEWQFIMAACDRLI 67 Query: 145 PAEGRG--PGALETNVPVFIDQQLHAGLGSDIYQQGPHQTDAPATLGFQIPYAPQDVYRI 202 PA G+G PGALETNVP+FIDQQ+H +GS+IY QGP T APAT+G+QIP+ PQ +Y+ Sbjct: 68 PAGGKGKAPGALETNVPIFIDQQMHGDMGSEIYMQGPFNTHAPATMGYQIPFRPQQIYKT 127 Query: 203 GIDLTQQISQQQHGKRFEQLDAKDKDALLTSLQKNAADFAALGEKAMKPSQFFGQLLGDT 262 GI L + Q H K F +L DKDA+LT +QKN FA LGE+A+K SQFF +LL DT Sbjct: 128 GIKLIEGWCQTTHQKSFHELSDADKDAVLTQVQKNTISFADLGEEALKGSQFFSELLADT 187 Query: 263 KNGYLADPMYGGNKDMKAWVAIGFPGARAAYTEWVDQHNVKYPLGPVSLSGKRA 316 K+GYLADP+YGGNK MKAW+AIGFPGARA++TEWV QHNV YPLGPVSL G +A Sbjct: 188 KHGYLADPIYGGNKGMKAWIAIGFPGARASFTEWVKQHNVPYPLGPVSLLGMQA 241 >ref|YP_003933302.1| hypothetical protein Pvag_3737 [Pantoea vagans C9-1] gb|ADO11853.1| hypothetical protein Pvag_3737 [Pantoea vagans C9-1] Length = 242 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 136/201 (67%), Positives = 159/201 (79%), Gaps = 3/201 (1%) Query: 119 ELQHYKPVFFNAAQWLFILAACDRLIPAEGRG--PGALETNVPVFIDQQLHA-GLGSDIY 175 EL YKP+FF+A +W FILAA DRLIPA G+G PGALETNVP+FIDQQLH+ GS+IY Sbjct: 42 ELADYKPIFFSADEWQFILAATDRLIPAGGKGKAPGALETNVPIFIDQQLHSEAFGSEIY 101 Query: 176 QQGPHQTDAPATLGFQIPYAPQDVYRIGIDLTQQISQQQHGKRFEQLDAKDKDALLTSLQ 235 QGP T APAT+G+QIP+ PQ +Y+ GI L Q SQ H K F L ++KDA+LT + Sbjct: 102 MQGPFNTKAPATMGYQIPFRPQQMYQTGIRLINQWSQNTHQKAFHALTLEEKDAVLTQVN 161 Query: 236 KNAADFAALGEKAMKPSQFFGQLLGDTKNGYLADPMYGGNKDMKAWVAIGFPGARAAYTE 295 KN DFAALGE +KPSQFF QLL DTK+GYLADPMYGGNK MKAW+AIGFPGARA++TE Sbjct: 162 KNEIDFAALGEADLKPSQFFSQLLSDTKHGYLADPMYGGNKGMKAWIAIGFPGARASFTE 221 Query: 296 WVDQHNVKYPLGPVSLSGKRA 316 WV QHNV YPLGPVS+ G+RA Sbjct: 222 WVKQHNVPYPLGPVSIKGERA 242 >ref|ZP_07378293.1| Gluconate 2-dehydrogenase (acceptor) [Pantoea sp. aB] gb|EFM20287.1| Gluconate 2-dehydrogenase (acceptor) [Pantoea sp. aB] Length = 242 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 135/201 (67%), Positives = 158/201 (78%), Gaps = 3/201 (1%) Query: 119 ELQHYKPVFFNAAQWLFILAACDRLIPAEGRG--PGALETNVPVFIDQQLHA-GLGSDIY 175 EL YKP+FF+A +W FILAA DRLIPA G+G PGALETNVP+FIDQQLH+ GS+IY Sbjct: 42 ELTDYKPIFFSADEWQFILAATDRLIPAGGKGKAPGALETNVPIFIDQQLHSEAFGSEIY 101 Query: 176 QQGPHQTDAPATLGFQIPYAPQDVYRIGIDLTQQISQQQHGKRFEQLDAKDKDALLTSLQ 235 QGP T APAT+G+QIP+ PQ +Y+ GI L Q SQ H K F L ++KDA+LT + Sbjct: 102 LQGPFNTQAPATMGYQIPFRPQQMYQTGIRLINQWSQNTHQKAFHALTLEEKDAVLTQVN 161 Query: 236 KNAADFAALGEKAMKPSQFFGQLLGDTKNGYLADPMYGGNKDMKAWVAIGFPGARAAYTE 295 KN DFAALGE +KPS FF QLL DTK+GYLADPMYGGNK MKAW+AIGFPGARA++TE Sbjct: 162 KNEIDFAALGEADLKPSHFFSQLLSDTKHGYLADPMYGGNKGMKAWIAIGFPGARASFTE 221 Query: 296 WVDQHNVKYPLGPVSLSGKRA 316 WV QHNV YPLGPVS+ G+RA Sbjct: 222 WVKQHNVPYPLGPVSIKGERA 242 >ref|YP_004114424.1| hypothetical protein Pat9b_0543 [Pantoea sp. At-9b] gb|ADU67868.1| conserved hypothetical protein [Pantoea sp. At-9b] Length = 243 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 131/202 (64%), Positives = 156/202 (77%), Gaps = 4/202 (1%) Query: 119 ELQHYKPVFFNAAQWLFILAACDRLIPAEGRG--PGALETNVPVFIDQQLHA-GLGSDIY 175 EL YKP+FF++ +W FILAA DRLIPA G G PGALETNVP+FIDQQLH+ G +IY Sbjct: 42 ELADYKPIFFSSDEWQFILAATDRLIPAGGNGKAPGALETNVPIFIDQQLHSPEFGDEIY 101 Query: 176 QQGPHQTDAPATLGFQIPYAPQDVYRIGIDLTQQISQQQHGKRFEQLDAKDKDALLTSLQ 235 QGP APAT+G+QIP+ PQ +Y IGI L Q +Q + K F +L ++KDA+LT + Sbjct: 102 MQGPFDVHAPATMGYQIPFTPQQLYHIGIKLVNQWTQSNYQKAFHELTLEEKDAVLTKVN 161 Query: 236 KN-AADFAALGEKAMKPSQFFGQLLGDTKNGYLADPMYGGNKDMKAWVAIGFPGARAAYT 294 KN DFAALGE +K SQFF QLL DTK+GYLADPMYGGNK MKAW+AIGFPGARA++T Sbjct: 162 KNDGIDFAALGEPNLKASQFFSQLLADTKHGYLADPMYGGNKGMKAWIAIGFPGARASFT 221 Query: 295 EWVDQHNVKYPLGPVSLSGKRA 316 EWV QHNV YPLGPVS+ G+RA Sbjct: 222 EWVKQHNVPYPLGPVSIMGERA 243