BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3942.p (305 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777928.1| N-acetylglucosamine kinase [Herbaspirillum s... 385 e-105 ref|YP_004753259.1| N-acetylglucosamine kinase [Collimonas fungi... 229 3e-58 ref|YP_004753633.1| N-acetylglucosamine kinase [Collimonas fungi... 226 4e-57 gb|ACF93790.1| NagK1 [Collimonas fungivorans Ter331] 224 9e-57 ref|NP_902566.1| N-acetylglucosamine kinase [Chromobacterium vio... 204 2e-50 >ref|YP_003777928.1| N-acetylglucosamine kinase [Herbaspirillum seropedicae SmR1] gb|ADJ66020.1| N-acetylglucosamine kinase protein [Herbaspirillum seropedicae SmR1] Length = 308 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 257/308 (83%), Positives = 278/308 (90%), Gaps = 3/308 (0%) Query: 1 MDAIAYLLGIDGGGTKTLVRLTSPQGQVLAQASGPGSALRIGAAQAWRVISQTIEDAFSS 60 MD IAYL+G+DGGGTKTLVRL S G+ L QASGPGSALR GAA AWRVI +TIE +F++ Sbjct: 1 MDGIAYLVGVDGGGTKTLVRLASLHGKTLGQASGPGSALRNGAAHAWRVIGRTIEASFAA 60 Query: 61 AGLRRPADETLAVGIGIAGENVAQWAADFRAQAPAFGVLEIVNDGVATLLGAHGGAPGAI 120 AGL+RPAD+ LAVGIGIAGENVAQW+ADFR APAFG L+IVNDGVATLLGAHGGAPGAI Sbjct: 61 AGLKRPADQALAVGIGIAGENVAQWSADFRTMAPAFGALDIVNDGVATLLGAHGGAPGAI 120 Query: 121 IAVGTGTIGLSLDLDGSRRVVDGWGFPSGDDGSGGWMGLRALHHAQLALDGRSHRGPLAD 180 +AVGTGTIGL+LD+DGSRRVVDGWGFPSGDDGSGGWMGLRALHHAQLALDGRS RGPLAD Sbjct: 121 VAVGTGTIGLALDIDGSRRVVDGWGFPSGDDGSGGWMGLRALHHAQLALDGRSPRGPLAD 180 Query: 181 AVLDLCRSELPA---EPARDERATLLDWLAQADQAAFARAARPVVAHAHDDVAARSILQA 237 AVL LCR+ELPA +PARDERATLLDWL+QADQAAFARAARPVVA A +D AAR+ILQA Sbjct: 181 AVLALCRAELPAHPGQPARDERATLLDWLSQADQAAFARAARPVVAQAANDEAARAILQA 240 Query: 238 AAAEISRMIDTLDPAQCLPLALCGGLAAALQPYLERRQQARIVPPQADAVDGALLLVKRA 297 AAAEIS MI TLDPAQ LPLALCGGLAAALQ YL+ RQQARIV PQADAVDGALLL +RA Sbjct: 241 AAAEISLMIATLDPAQRLPLALCGGLAAALQAYLDPRQQARIVAPQADAVDGALLLAQRA 300 Query: 298 LQPKETPA 305 LQ KETPA Sbjct: 301 LQAKETPA 308 >ref|YP_004753259.1| N-acetylglucosamine kinase [Collimonas fungivorans Ter331] gb|ACF93777.1| NagK2 [Collimonas fungivorans Ter331] gb|AEK62436.1| N-acetylglucosamine kinase [Collimonas fungivorans Ter331] Length = 321 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 137/290 (47%), Positives = 183/290 (63%), Gaps = 3/290 (1%) Query: 3 AIAYLLGIDGGGTKTLVRLTSPQGQVLAQASGPGSALRIGAAQAWRVISQTIEDAFSSAG 62 A YL+G+DGGGTKT +R+ P G +A S SAL G ++AW I +++AF SAG Sbjct: 14 AYEYLIGVDGGGTKTYIRVERPDGSHVADGSSGPSALMHGTSKAWCAIVTALDNAFQSAG 73 Query: 63 LRRPADETLAVGIGIAGENVAQWAADFRAQAPAFGVLEIVNDGVATLLGAHGGAPGAIIA 122 + RP + +A G G++G N QWAA F AQ P FG L D TLLGAH G G ++A Sbjct: 74 ISRPPYQAIAAGCGLSGINNPQWAAQFSAQNPGFGALATGTDAFTTLLGAHLGQAGVVVA 133 Query: 123 VGTGTIGLSLDLDGSRRVVDGWGFPSGDDGSGGWMGLRALHHAQLALDGRSHRGPLADAV 182 +GTG++G L DGSRR V GWGF +GD+ SGGW+GLRA +H + ALDGR G LA A+ Sbjct: 134 IGTGSVGEVLLADGSRREVGGWGFQTGDEASGGWIGLRAANHVERALDGRVIPGSLARAI 193 Query: 183 LDLCRSELPAE---PARDERATLLDWLAQADQAAFARAARPVVAHAHDDVAARSILQAAA 239 + C + A + R ++ W+ A+Q+ FA+ A VVAHA D AA +IL A Sbjct: 194 VRFCGGDDDAGTDFSSSQNRERVIAWVNSANQSIFAQLAPLVVAHAAQDEAALTILHKAG 253 Query: 240 AEISRMIDTLDPAQCLPLALCGGLAAALQPYLERRQQARIVPPQADAVDG 289 EI+++ + LDP+Q LP+ALCGGLAA LQ YL ++R + P+ADA G Sbjct: 254 QEIAQIANALDPSQQLPIALCGGLAAPLQAYLPEPLKSRAITPRADAASG 303 >ref|YP_004753633.1| N-acetylglucosamine kinase [Collimonas fungivorans Ter331] gb|AEK62810.1| N-acetylglucosamine kinase [Collimonas fungivorans Ter331] Length = 331 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 185/313 (59%), Gaps = 12/313 (3%) Query: 2 DAIAYLLGIDGGGTKTLVRLTSPQ-----------GQVLAQASGPGSALRIGAAQAWRVI 50 + I YL+G+DGGGT T VR+ G +LA G S L G QAW + Sbjct: 19 NMIEYLIGVDGGGTGTRVRVVRAASDARNEGPHGAGPLLALGHGGPSGLMHGVEQAWSAV 78 Query: 51 SQTIEDAFSSAGLRRPADETLAVGIGIAGENVAQWAADFRAQAPAFGVLEIVNDGVATLL 110 + + AFSSAGL RPA E +A+G+G+AG N QWAADF A+ P FG + D TL+ Sbjct: 79 LEALNAAFSSAGLVRPALEKMAIGLGLAGVNNKQWAADFSAKNPGFGDAVVETDAFTTLV 138 Query: 111 GAHGGAPGAIIAVGTGTIGLSLDLDGSRRVVDGWGFPSGDDGSGGWMGLRALHHAQLALD 170 GAH G PG IIA+GTG++G L DG RR V GWGFP+ D+ G W+G+RA+ HAQ LD Sbjct: 139 GAHQGRPGVIIAIGTGSVGEVLTTDGKRREVGGWGFPASDEAGGAWLGMRAVTHAQQVLD 198 Query: 171 GRSHRGPLADAVLDLCRSELPAEPARDERATLLDWLAQADQAAFARAARPVVAHAHDDVA 230 GR+ A A++ C A R ++ WLA A Q ++AR A VV++A D A Sbjct: 199 GRAPGSDFARALIHFCERGC-ATHFDSHRDSMFAWLAGASQTSYARLAPIVVSYAESDPA 257 Query: 231 ARSILQAAAAEISRMIDTLDPAQCLPLALCGGLAAALQPYLERRQQARIVPPQADAVDGA 290 AR I+ A E++R+ LDP+ LP+ALCGGLAA L+ YL A +V P ADA GA Sbjct: 258 ARQIMLEAGQEVARIAAALDPSGQLPVALCGGLAAHLREYLPAPLLALVVKPHADAAAGA 317 Query: 291 LLLVKRALQPKET 303 L L+ L+ K+T Sbjct: 318 LRLIDERLKGKKT 330 >gb|ACF93790.1| NagK1 [Collimonas fungivorans Ter331] Length = 324 Score = 224 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 142/313 (45%), Positives = 185/313 (59%), Gaps = 12/313 (3%) Query: 2 DAIAYLLGIDGGGTKTLVRLTSPQ-----------GQVLAQASGPGSALRIGAAQAWRVI 50 + I YL+G+DGGGT T VR+ G +LA G S L G QAW + Sbjct: 12 NMIEYLIGVDGGGTGTRVRVVRAASDARNEGPHGAGPLLALGHGGPSGLMHGVEQAWSAV 71 Query: 51 SQTIEDAFSSAGLRRPADETLAVGIGIAGENVAQWAADFRAQAPAFGVLEIVNDGVATLL 110 + + AFSSAGL RPA E +A+G+G+AG N QWAADF A+ P FG + D TL+ Sbjct: 72 LEALNAAFSSAGLVRPALEKMAIGLGLAGVNNKQWAADFSAKNPGFGDAVVETDAFTTLV 131 Query: 111 GAHGGAPGAIIAVGTGTIGLSLDLDGSRRVVDGWGFPSGDDGSGGWMGLRALHHAQLALD 170 GAH G PG IIA+GTG++G L DG RR V GWGFP+ D+ G W+G+RA+ HAQ LD Sbjct: 132 GAHQGRPGVIIAIGTGSVGEVLTTDGKRREVGGWGFPASDEAGGAWLGMRAVTHAQQVLD 191 Query: 171 GRSHRGPLADAVLDLCRSELPAEPARDERATLLDWLAQADQAAFARAARPVVAHAHDDVA 230 GR+ A A++ C A R ++ WLA A Q ++AR A VV++A D A Sbjct: 192 GRAPGSDFARALIHFCERGC-ATHFDSHRDSMFAWLAGASQTSYARLAPIVVSYAESDPA 250 Query: 231 ARSILQAAAAEISRMIDTLDPAQCLPLALCGGLAAALQPYLERRQQARIVPPQADAVDGA 290 AR I+ A E++R+ LDP+ LP+ALCGGLAA L+ YL A +V P ADA GA Sbjct: 251 ARQIMLEAGQEVARIAAALDPSGQLPVALCGGLAAHLREYLPAPLLALVVKPHADAAAGA 310 Query: 291 LLLVKRALQPKET 303 L L+ L+ K+T Sbjct: 311 LRLIDERLKGKKT 323 >ref|NP_902566.1| N-acetylglucosamine kinase [Chromobacterium violaceum ATCC 12472] gb|AAQ60564.1| probable N-acetylglucosamine kinase [Chromobacterium violaceum ATCC 12472] Length = 297 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 131/294 (44%), Positives = 176/294 (59%), Gaps = 9/294 (3%) Query: 3 AIAYLLGIDGGGTKTLVRLTSPQGQVLAQASGPGSALRIGAAQAWRVISQTIEDAFSSAG 62 +I YL+G+DGGGT T +RL + G LA A G SAL G A++W+ + T+E AF AG Sbjct: 9 SIRYLIGVDGGGTGTRIRLHASDGTPLAMAEGGASALSQGIAKSWQAVLSTLEAAFQQAG 68 Query: 63 LRRPADETLAVGIGIAGENVAQWAADFRAQAPAFGVLEIVNDGVATLLGAHGGAPGAIIA 122 L A+G+G++G + QWA +F +QAP F L + DG TLLGAHGG PG I+A Sbjct: 69 LPAAPASACAIGLGLSGVHNRQWAGEFESQAPGFARLSLATDGYTTLLGAHGGQPGIIVA 128 Query: 123 VGTGTIGLSLDLDGSRRVVDGWGFPSGDDGSGGWMGLRALHHAQLALDGRSHRGPLADAV 182 +GTG+IG +L DGS R GWG+PSGD+ SG W+G RA Q+ALDGR PL AV Sbjct: 129 LGTGSIGEALYPDGSHREAGGWGYPSGDEASGAWLGQRAAQLTQMALDGRHSHSPLTRAV 188 Query: 183 LDLCRSELPAEPARDERATLLDWLAQADQAAFARAARPVVAHAHDDVAARSILQAAAAEI 242 LD + A ++ W +A A FAR A V++ A D A ++L+ A + Sbjct: 189 LDFVGGDWQA---------MMAWNGRATPAQFARLAPLVLSAARVDPEADALLRQAGEDA 239 Query: 243 SRMIDTLDPAQCLPLALCGGLAAALQPYLERRQQARIVPPQADAVDGALLLVKR 296 + LDP LP+ALCGGL AL+ +L + R+V PQ D+ GALLL++R Sbjct: 240 WAIARALDPQDELPVALCGGLGQALRDWLPPGFRQRLVAPQGDSAQGALLLLQR 293