BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3937.p (461 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777924.1| sugar ABC transporter periplasmic protein [H... 810 0.0 ref|YP_004753255.1| N-acetyl-D-glucosamine ABC transport system,... 676 0.0 gb|ACF93773.1| extracellular solute-binding protein [Collimonas ... 676 0.0 emb|CBA30862.1| hypothetical protein Csp_C25680 [Curvibacter put... 587 e-165 ref|YP_001340512.1| extracellular solute-binding protein [Marino... 493 e-137 >ref|YP_003777924.1| sugar ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ66016.1| ABC-type sugar transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 439 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 418/438 (95%), Positives = 426/438 (97%), Gaps = 3/438 (0%) Query: 27 MQTEQKAGRFSL---IPSLPSFPRRRLLAACALAFGLTGLAAAPGQAGTLTIESWRVDDL 83 MQTEQKAG FSL +P+LP+FPRR LLAACALA L LAAAP QAGTLTIESWRVDDL Sbjct: 2 MQTEQKAGGFSLFSALPALPAFPRRPLLAACALALSLGSLAAAPSQAGTLTIESWRVDDL 61 Query: 84 PLWQEVLIPAFQRSNPGITVKFSPTAPTEYDSSLAARMAGGTAGDLVACRPFDVSLSLYN 143 PLWQEVLIPAFQRSNPGITVKFSPTAPTEYDSSLAARMAGGTAGDLVACRPFDVSLSLYN Sbjct: 62 PLWQEVLIPAFQRSNPGITVKFSPTAPTEYDSSLAARMAGGTAGDLVACRPFDVSLSLYN 121 Query: 144 KGHLEKLDGKPGMEFFAPAAKAAWQTDDGKDTFCMPMASVIHGFFYNTKIFKELNLEPPK 203 KGHLEKLDGKPGMEFFAPAAKAAWQTDDG+DTFCMPMASVIHGFFYNTKIFKELNLEPPK Sbjct: 122 KGHLEKLDGKPGMEFFAPAAKAAWQTDDGRDTFCMPMASVIHGFFYNTKIFKELNLEPPK 181 Query: 204 TEAEFFKLLDTVKANGKYAPLAMGTSEQWESHQVLFTSIGPNYWKGEEGRKALIAGKAKF 263 TEAEFFKLLDTVKANGKYAPL MGT+EQWESHQVLFTSIGPNYWKGEEGRKALIAGKAKF Sbjct: 182 TEAEFFKLLDTVKANGKYAPLVMGTAEQWESHQVLFTSIGPNYWKGEEGRKALIAGKAKF 241 Query: 264 TDPQFVAAWEYEAKLGKYLPKGASAQTYSDSQNMFALGKGAVYPAGSWDIAYFNGKMDFA 323 TDPQFVAAW YEAKLGKYLPKGASAQTYSDSQNMFALGKGAVYPAGSWDIAYFNGKMDFA Sbjct: 242 TDPQFVAAWNYEAKLGKYLPKGASAQTYSDSQNMFALGKGAVYPAGSWDIAYFNGKMDFA 301 Query: 324 AFPPPVPKNGDACYISDHNDIGMGINKKSKNKDDAYKFLAWLGSQEFADLYTNKVTGFFS 383 AFPPPVPKNGDACYISDHNDIGMGINKKSKNK+DAYKFLAWLGSQEFADLYTNKVTGFFS Sbjct: 302 AFPPPVPKNGDACYISDHNDIGMGINKKSKNKEDAYKFLAWLGSQEFADLYTNKVTGFFS 361 Query: 384 LSNHLISVKDPIAKQMMGWRKNCASTIRVNSQILNRGTPSMENEMWNVNAQVLNGKMSPQ 443 LSNHLISVKDPIAKQMMGWRKNCASTIRVNSQILNRGTPSMENEMWNVNAQVLNGKM+PQ Sbjct: 362 LSNHLISVKDPIAKQMMGWRKNCASTIRVNSQILNRGTPSMENEMWNVNAQVLNGKMTPQ 421 Query: 444 DAAAKIQAGFAKWYKPQQ 461 DAAAKIQ+GFAKWYKPQQ Sbjct: 422 DAAAKIQSGFAKWYKPQQ 439 >ref|YP_004753255.1| N-acetyl-D-glucosamine ABC transport system, sugar-binding protein [Collimonas fungivorans Ter331] gb|AEK62432.1| N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein [Collimonas fungivorans Ter331] Length = 420 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 325/416 (78%), Positives = 367/416 (88%), Gaps = 6/416 (1%) Query: 48 RRLLAACALAFGLTGLAAAPGQAGTLTIESWRVDDLPLWQEVLIPAFQRSNPGITVKFSP 107 R + A +A G A QAGTLTIESWRVDD LW+ VLIPAFQ+ NPGI VKF+P Sbjct: 9 RTIRNAVLIALATVGTA----QAGTLTIESWRVDDKTLWETVLIPAFQKKNPGIEVKFAP 64 Query: 108 TAPTEYDSSLAARMAGGTAGDLVACRPFDVSLSLYNKGHLEKLDGKPGMEFFAPAAKAAW 167 TAPTEYDSSL AR+AGGTAGDL+ACRPFDVSLSLY KG+LEKLDGKPGME F +AK AW Sbjct: 65 TAPTEYDSSLTARLAGGTAGDLIACRPFDVSLSLYKKGNLEKLDGKPGMEHFPASAKTAW 124 Query: 168 QTDDGKDTFCMPMASVIHGFFYNTKIFKELNLEPPKTEAEFFKLLDTVKANGKYAPLAMG 227 QTDDGKDTFCMP+ASV+HGF YN KIFKELNL+PPKTEAEFFK+LDT+K+NGKY PLA+G Sbjct: 125 QTDDGKDTFCMPVASVMHGFLYNQKIFKELNLQPPKTEAEFFKVLDTIKSNGKYTPLALG 184 Query: 228 TSEQWESHQVLFTSIGPNYWKGEEGRKALIAGKAKFTDPQFVAAWEYEAKLGKYLPKGAS 287 T++QWES QV+FT +GPNYWKGEEGRKALIAGK KFTDP FV A+EYEAKLGKYL KGAS Sbjct: 185 TADQWESSQVIFTGVGPNYWKGEEGRKALIAGKEKFTDPNFVNAFEYEAKLGKYLSKGAS 244 Query: 288 AQTYSDSQNMFALGKGAVYPAGSWDIAYF--NGKMDFAAFPPPVPKNGDACYISDHNDIG 345 +QTY DSQN+FALGK A+YP GSWDIAYF N K + AFPPPVPK GD CYISDHNDIG Sbjct: 245 SQTYGDSQNLFALGKAAIYPTGSWDIAYFNTNAKFEMGAFPPPVPKAGDKCYISDHNDIG 304 Query: 346 MGINKKSKNKDDAYKFLAWLGSQEFADLYTNKVTGFFSLSNHLISVKDPIAKQMMGWRKN 405 MG+NKKSKNK+DAYKFL WLGSQEFAD+YTNKVTGFFSLS+HLISVKDP+AKQM+ WRK+ Sbjct: 305 MGVNKKSKNKEDAYKFLTWLGSQEFADIYTNKVTGFFSLSDHLISVKDPVAKQMIDWRKS 364 Query: 406 CASTIRVNSQILNRGTPSMENEMWNVNAQVLNGKMSPQDAAAKIQAGFAKWYKPQQ 461 C+STIR+N+QILNRG PSMEN++WNVNAQVLNGK++P++AAA+IQ GFAKWYKPQQ Sbjct: 365 CSSTIRLNAQILNRGEPSMENQLWNVNAQVLNGKLAPKEAAAQIQTGFAKWYKPQQ 420 >gb|ACF93773.1| extracellular solute-binding protein [Collimonas fungivorans Ter331] Length = 419 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 325/416 (78%), Positives = 367/416 (88%), Gaps = 6/416 (1%) Query: 48 RRLLAACALAFGLTGLAAAPGQAGTLTIESWRVDDLPLWQEVLIPAFQRSNPGITVKFSP 107 R + A +A G A QAGTLTIESWRVDD LW+ VLIPAFQ+ NPGI VKF+P Sbjct: 8 RTIRNAVLIALATVGTA----QAGTLTIESWRVDDKTLWETVLIPAFQKKNPGIEVKFAP 63 Query: 108 TAPTEYDSSLAARMAGGTAGDLVACRPFDVSLSLYNKGHLEKLDGKPGMEFFAPAAKAAW 167 TAPTEYDSSL AR+AGGTAGDL+ACRPFDVSLSLY KG+LEKLDGKPGME F +AK AW Sbjct: 64 TAPTEYDSSLTARLAGGTAGDLIACRPFDVSLSLYKKGNLEKLDGKPGMEHFPASAKTAW 123 Query: 168 QTDDGKDTFCMPMASVIHGFFYNTKIFKELNLEPPKTEAEFFKLLDTVKANGKYAPLAMG 227 QTDDGKDTFCMP+ASV+HGF YN KIFKELNL+PPKTEAEFFK+LDT+K+NGKY PLA+G Sbjct: 124 QTDDGKDTFCMPVASVMHGFLYNQKIFKELNLQPPKTEAEFFKVLDTIKSNGKYTPLALG 183 Query: 228 TSEQWESHQVLFTSIGPNYWKGEEGRKALIAGKAKFTDPQFVAAWEYEAKLGKYLPKGAS 287 T++QWES QV+FT +GPNYWKGEEGRKALIAGK KFTDP FV A+EYEAKLGKYL KGAS Sbjct: 184 TADQWESSQVIFTGVGPNYWKGEEGRKALIAGKEKFTDPNFVNAFEYEAKLGKYLSKGAS 243 Query: 288 AQTYSDSQNMFALGKGAVYPAGSWDIAYF--NGKMDFAAFPPPVPKNGDACYISDHNDIG 345 +QTY DSQN+FALGK A+YP GSWDIAYF N K + AFPPPVPK GD CYISDHNDIG Sbjct: 244 SQTYGDSQNLFALGKAAIYPTGSWDIAYFNTNAKFEMGAFPPPVPKAGDKCYISDHNDIG 303 Query: 346 MGINKKSKNKDDAYKFLAWLGSQEFADLYTNKVTGFFSLSNHLISVKDPIAKQMMGWRKN 405 MG+NKKSKNK+DAYKFL WLGSQEFAD+YTNKVTGFFSLS+HLISVKDP+AKQM+ WRK+ Sbjct: 304 MGVNKKSKNKEDAYKFLTWLGSQEFADIYTNKVTGFFSLSDHLISVKDPVAKQMIDWRKS 363 Query: 406 CASTIRVNSQILNRGTPSMENEMWNVNAQVLNGKMSPQDAAAKIQAGFAKWYKPQQ 461 C+STIR+N+QILNRG PSMEN++WNVNAQVLNGK++P++AAA+IQ GFAKWYKPQQ Sbjct: 364 CSSTIRLNAQILNRGEPSMENQLWNVNAQVLNGKLAPKEAAAQIQTGFAKWYKPQQ 419 >emb|CBA30862.1| hypothetical protein Csp_C25680 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 415 Score = 587 bits (1514), Expect = e-165, Method: Composition-based stats. Identities = 276/394 (70%), Positives = 328/394 (83%), Gaps = 2/394 (0%) Query: 70 AGTLTIESWRVDDLPLWQEVLIPAFQRSNPGITVKFSPTAPTEYDSSLAARMAGGTAGDL 129 AGTLTIESWRVDD LW++VL+PAF +++PGITVKF+PTAP EY+S+L AR+ GTAGDL Sbjct: 22 AGTLTIESWRVDDKGLWEDVLLPAFYKAHPGITVKFAPTAPPEYNSALNARLTAGTAGDL 81 Query: 130 VACRPFDVSLSLYNKGHLEKLDGKPGMEFFAPAAKAAWQTDDGKDTFCMPMASVIHGFFY 189 V CRPFDVSL LY KGHL+KL+G P ++ F +A+ AWQTDDGKDT+C+PMASVIHGFFY Sbjct: 82 VTCRPFDVSLDLYKKGHLDKLNGNPALKNFPESAQVAWQTDDGKDTYCVPMASVIHGFFY 141 Query: 190 NTKIFKELNLEPPKTEAEFFKLLDTVKANGKYAPLAMGTSEQWESHQVLFTSIGPNYWKG 249 N K+F EL L PP TEA+FF +LD VKA GK AP+AMGT++QWE+HQ+++T IGPNYWKG Sbjct: 142 NKKVFAELGLNPPVTEADFFNVLDKVKAAGKVAPIAMGTADQWETHQIVYTGIGPNYWKG 201 Query: 250 EEGRKALIAGKAKFTDPQFVAAWEYEAKLGKYLPKGASAQTYSDSQNMFALGKGAVYPAG 309 EEGRKALIAGK KFTDP+FV W+ K YLPKG AQTY DSQN+F G+ A+YPAG Sbjct: 202 EEGRKALIAGKKKFTDPEFVKTWDVMGKWSNYLPKGYQAQTYGDSQNLFGSGRAAIYPAG 261 Query: 310 SWDIAYF--NGKMDFAAFPPPVPKNGDACYISDHNDIGMGINKKSKNKDDAYKFLAWLGS 367 SWDI+YF N K++F AF PPV K GD CYISDH DI MG+N KSKNK DA FL WL S Sbjct: 262 SWDISYFEGNSKVEFGAFKPPVAKAGDPCYISDHTDIAMGVNSKSKNKADAQVFLNWLAS 321 Query: 368 QEFADLYTNKVTGFFSLSNHLISVKDPIAKQMMGWRKNCASTIRVNSQILNRGTPSMENE 427 +EFADLYTNKVTGFFSLSNH I VK+P+AK+M+GWR C STIR+N+QI++RGTPSMENE Sbjct: 322 KEFADLYTNKVTGFFSLSNHAIDVKNPVAKEMIGWRNQCKSTIRLNAQIMSRGTPSMENE 381 Query: 428 MWNVNAQVLNGKMSPQDAAAKIQAGFAKWYKPQQ 461 WNVN+QV+NGKM+P+DAAA+IQ GFAKWY P + Sbjct: 382 FWNVNSQVMNGKMAPKDAAAQIQNGFAKWYAPAK 415 >ref|YP_001340512.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gb|ABR70577.1| extracellular solute-binding protein family 1 [Marinomonas sp. MWYL1] Length = 427 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 236/415 (56%), Positives = 304/415 (73%), Gaps = 5/415 (1%) Query: 49 RLLAACALAFGLTGLAAAPGQAGTLTIESWRVDDLPLWQEVLIPAFQRSNPGITVKFSPT 108 +L A+ TG+A A A L+IESWR DD +W +V+IPAF +S+P V F+PT Sbjct: 16 KLTCLAAILLSSTGIAQA---ANGLSIESWRSDDANIWSDVIIPAFNKSHPDTKVNFAPT 72 Query: 109 APTEYDSSLAARMAGGTAGDLVACRPFDVSLSLYNKGHLEKLDGKPGMEFFAPAAKAAWQ 168 PTEY+S+L A++ G+AGDL+ CRPFD +L LY G+L L+ G++ F+ AK+AW Sbjct: 73 PPTEYNSALQAKLKAGSAGDLITCRPFDTALDLYKDGYLANLNDLEGLKQFSDVAKSAWV 132 Query: 169 TDDGKDTFCMPMASVIHGFFYNTKIFKELNLEPPKTEAEFFKLLDTVKANGKYAPLAMGT 228 TDDGKD FCMP+ASVIHGF YN +IFKELNL PKT EFFK LDT+K+ +Y PLAMGT Sbjct: 133 TDDGKDQFCMPVASVIHGFIYNKEIFKELNLSVPKTRDEFFKTLDTIKSESRYIPLAMGT 192 Query: 229 SEQWESHQVLFTSIGPNYWKGEEGRKALIAGKAKFTDPQFVAAWEYEAKLGKYLPKGASA 288 ++QWE+ + F +IGPNYW+GE+GRKAL++GK KFTD +V W+ A+ YL +G A Sbjct: 193 ADQWEAATMGFQNIGPNYWQGEKGRKALLSGKEKFTDKAYVDTWKELAQWKPYLGRGFEA 252 Query: 289 QTYSDSQNMFALGKGAVYPAGSWDIAYFNGKMD--FAAFPPPVPKNGDACYISDHNDIGM 346 Q YSDSQN+F LG+ A+YPAGSWDI FN + D F AFPPPV K GD CYISDH D+G+ Sbjct: 253 QKYSDSQNLFTLGRAAIYPAGSWDIQTFNNQADFQFGAFPPPVAKAGDTCYISDHTDMGI 312 Query: 347 GINKKSKNKDDAYKFLAWLGSQEFADLYTNKVTGFFSLSNHLISVKDPIAKQMMGWRKNC 406 GIN S NK+ A FL W+ S+EFA LY N V GFF LS+H I +KDP+A++ M WR+ C Sbjct: 313 GINASSTNKEAAKVFLNWMASKEFATLYANAVPGFFPLSDHQIDIKDPVAQEFMSWRQQC 372 Query: 407 ASTIRVNSQILNRGTPSMENEMWNVNAQVLNGKMSPQDAAAKIQAGFAKWYKPQQ 461 STIR + QIL+RGTP++EN++WNV+AQV+NG M+P+ AA + Q G +WYKPQQ Sbjct: 373 ESTIRNSYQILSRGTPNLENQLWNVSAQVINGTMTPEAAAKETQEGLEQWYKPQQ 427