BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3924.p (373 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777914.1| N-carbamoyl-L-amino acid amidohydrolase [Her... 530 e-148 ref|YP_297481.1| allantoate amidohydrolase [Ralstonia eutropha J... 477 e-132 ref|YP_002007025.1| allantoate amidohydrolase [Cupriavidus taiwa... 461 e-128 ref|YP_728015.1| allantoate amidohydrolase [Ralstonia eutropha H... 460 e-127 ref|YP_004687312.1| N-carbamoyl-L-amino acid hydrolase AmaB [Cup... 457 e-127 >ref|YP_003777914.1| N-carbamoyl-L-amino acid amidohydrolase [Herbaspirillum seropedicae SmR1] gb|ADJ66006.1| N-carbamoyl-L-amino acid amidohydrolase protein [Herbaspirillum seropedicae SmR1] Length = 417 Score = 530 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 290/359 (80%), Positives = 314/359 (87%) Query: 1 MRRADVLAVHTEAPGMMTRTYLTPVHHAAAQQLSEWMSAAGMQVRRDDAGNVIGRYEATP 60 M+ A LA HTE+PGM+TRTYLTP H AAA L+ WM AGM+VRRD+AGNVIGRYEA P Sbjct: 16 MQWAQQLAQHTESPGMLTRTYLTPQHQAAAAALARWMEEAGMRVRRDNAGNVIGRYEAAP 75 Query: 61 GHENAPALATGSHFDTVRNAGKYDGNLGIVLPLACIAQWHRAGKRFAFPIEVIGFAEEEG 120 GHE+AP+ TGSHFDTVRN G YDGNLGIVLPLACIA+WHR G+RFAFPIEVIGFAEEEG Sbjct: 76 GHESAPSFVTGSHFDTVRNGGWYDGNLGIVLPLACIARWHRQGQRFAFPIEVIGFAEEEG 135 Query: 121 VRFKATLLGSRTVAGTFDQAVLENVDGEGISMRQAIRAAGLDPAGIAGDAWSPASVAAFV 180 VRFKATLLGSRTVAGTFDQAVLEN D +G++MR AIRAAGLDP GIA DAW P S+AAFV Sbjct: 136 VRFKATLLGSRTVAGTFDQAVLENRDSDGVTMRAAIRAAGLDPDGIAADAWQPGSMAAFV 195 Query: 181 EVHIEQGPLLLNEGLPVGVVTAISGASRFMAEVRGLAGHAGTVPMHLRRDAAMAAAEIGL 240 EVHIEQGPLLLNE LPVGVVTAISGASRFMAEV GLAGHAGTVPMHLRRDAAMAAAEIGL Sbjct: 196 EVHIEQGPLLLNEDLPVGVVTAISGASRFMAEVHGLAGHAGTVPMHLRRDAAMAAAEIGL 255 Query: 241 YIERRCGIKPGLVGTMGILEVVQGAANVVPGLASFSIDIRAEEDAVREDAVADVEAEIAR 300 YIERRC IKP LVGTMG+LEVVQGAANVVPGLASFSIDIRAE+D+ R AVADV+AEI R Sbjct: 256 YIERRCSIKPELVGTMGLLEVVQGAANVVPGLASFSIDIRAEDDSDRLAAVADVKAEIDR 315 Query: 301 ICARRNVTITLRKTHQAGSVPCADRLQQQLANAIDACGLPVRHLPSGAGHDAMAMATIA 359 I ARR V + LR+TH+A SVPCA RLQ LA +I A G PVRHLPSGAGHDAMA+A +A Sbjct: 316 IAARRQVQLALRQTHEAASVPCAPRLQAALAQSIAAAGWPVRHLPSGAGHDAMALAGLA 374 >ref|YP_297481.1| allantoate amidohydrolase [Ralstonia eutropha JMP134] gb|AAZ62637.1| Amidase, hydantoinase/carbamoylase [Ralstonia eutropha JMP134] Length = 417 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 256/360 (71%), Positives = 291/360 (80%), Gaps = 4/360 (1%) Query: 1 MRRADVLAVHTEAPGMMTRTYLTPVHHAAAQQLSEWMSAAGMQVRRDDAGNVIGRYEAT- 59 M AD LAVHTE PG++TRTYLT HH AA QL+EWM AAGM VRRD AGNVIGRYE T Sbjct: 16 MTWADALAVHTEQPGLLTRTYLTEAHHGAAAQLTEWMQAAGMTVRRDAAGNVIGRYEGTD 75 Query: 60 PGHENAPALATGSHFDTVRNAGKYDGNLGIVLPLACIAQWHRAGKRFAFPIEVIGFAEEE 119 PG APAL TGSHFDTVR+AG++DGNLG++LP+AC+A+W+R GKRF F IEV+GFAEEE Sbjct: 76 PG---APALLTGSHFDTVRDAGRFDGNLGVILPVACVAEWNRQGKRFPFAIEVVGFAEEE 132 Query: 120 GVRFKATLLGSRTVAGTFDQAVLENVDGEGISMRQAIRAAGLDPAGIAGDAWSPASVAAF 179 GVRFKATLLGSR +AGTFD VL+NVD G +MR+ + AAG DPAG+ A P V AF Sbjct: 133 GVRFKATLLGSRAIAGTFDNNVLDNVDDSGKTMREVMAAAGFDPAGLPAAAHDPKKVLAF 192 Query: 180 VEVHIEQGPLLLNEGLPVGVVTAISGASRFMAEVRGLAGHAGTVPMHLRRDAAMAAAEIG 239 +EVHIEQGP+LLNEGLPVGVVTAISGA+RF+ E+ GLAGHAGTVPM +RRDAAMA AEIG Sbjct: 193 IEVHIEQGPVLLNEGLPVGVVTAISGATRFVIELEGLAGHAGTVPMDMRRDAAMAGAEIG 252 Query: 240 LYIERRCGIKPGLVGTMGILEVVQGAANVVPGLASFSIDIRAEEDAVREDAVADVEAEIA 299 LYIE+RCG KPGLVGT+G V GA N VPG A FSIDIRA EDA RE AV DV AEI Sbjct: 253 LYIEKRCGGKPGLVGTVGQFNVPNGATNTVPGRAVFSIDIRAGEDAEREAAVNDVLAEIE 312 Query: 300 RICARRNVTITLRKTHQAGSVPCADRLQQQLANAIDACGLPVRHLPSGAGHDAMAMATIA 359 R+CARRNV +RKTH+A SVPCA LQ+Q A A+ G+PVRHLPSGAGHD+MA+A IA Sbjct: 313 RVCARRNVRAQVRKTHEAKSVPCASWLQEQWAAAVARQGVPVRHLPSGAGHDSMAIAAIA 372 >ref|YP_002007025.1| allantoate amidohydrolase [Cupriavidus taiwanensis LMG 19424] emb|CAQ70964.1| N-carbamoyl-L-amino acid hydrolase (L-carbamoylase) [Cupriavidus taiwanensis LMG 19424] Length = 418 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 248/350 (70%), Positives = 280/350 (80%), Gaps = 2/350 (0%) Query: 1 MRRADVLAVHTEAPGMMTRTYLTPVHHAAAQQLSEWMSAAGMQVRRDDAGNVIGRYEATP 60 M AD LAVHTE PGM+TRTYLT HH AA QL+EWM AGM VRRD AGNVIGRYE T Sbjct: 17 MAWADALAVHTEQPGMLTRTYLTDAHHGAAAQLTEWMQQAGMTVRRDAAGNVIGRYEGTT 76 Query: 61 GHENAPALATGSHFDTVRNAGKYDGNLGIVLPLACIAQWHRAGKRFAFPIEVIGFAEEEG 120 +APAL TGSHFDTVR+AG+YDGNLG++LP+AC+A+W+R GKRF F +EV+GFAEEEG Sbjct: 77 --PDAPALLTGSHFDTVRDAGRYDGNLGVILPIACVAEWNRQGKRFPFALEVVGFAEEEG 134 Query: 121 VRFKATLLGSRTVAGTFDQAVLENVDGEGISMRQAIRAAGLDPAGIAGDAWSPASVAAFV 180 VRFKATLLGSR +AGTFD VL+NVD G +MR+ +R AG D A + + VAAFV Sbjct: 135 VRFKATLLGSRAIAGTFDNNVLDNVDDSGKTMREVMREAGFDAAALPAARHDRSKVAAFV 194 Query: 181 EVHIEQGPLLLNEGLPVGVVTAISGASRFMAEVRGLAGHAGTVPMHLRRDAAMAAAEIGL 240 EVHIEQGP+LLNEGLPVGVVTAISGA+RF+ E+ GLAGHAGTVPM +RRDAAMA AEIGL Sbjct: 195 EVHIEQGPVLLNEGLPVGVVTAISGATRFIVELEGLAGHAGTVPMDMRRDAAMAGAEIGL 254 Query: 241 YIERRCGIKPGLVGTMGILEVVQGAANVVPGLASFSIDIRAEEDAVREDAVADVEAEIAR 300 YIE+RCG KPGLVGT+G V GA NVVPG A FSIDIRA EDA RE AV DV AEI R Sbjct: 255 YIEKRCGGKPGLVGTVGQFNVPNGATNVVPGRAVFSIDIRAGEDAEREAAVNDVLAEIER 314 Query: 301 ICARRNVTITLRKTHQAGSVPCADRLQQQLANAIDACGLPVRHLPSGAGH 350 +CARRNV +RKTH+A SVPCA LQ+Q A AI G+PVRHLPSGAGH Sbjct: 315 VCARRNVRAQIRKTHEAKSVPCAPWLQEQWAAAIARQGVPVRHLPSGAGH 364 >ref|YP_728015.1| allantoate amidohydrolase [Ralstonia eutropha H16] emb|CAJ94647.1| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase deacylase [Ralstonia eutropha H16] Length = 418 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 247/350 (70%), Positives = 278/350 (79%), Gaps = 2/350 (0%) Query: 1 MRRADVLAVHTEAPGMMTRTYLTPVHHAAAQQLSEWMSAAGMQVRRDDAGNVIGRYEATP 60 M AD LAVHTE PGM+TRTYLT HH AA QL+EWM AGM VRRD AGNVIGRYE T Sbjct: 17 MAWADALAVHTEQPGMLTRTYLTEAHHGAAAQLTEWMQQAGMTVRRDAAGNVIGRYEGTS 76 Query: 61 GHENAPALATGSHFDTVRNAGKYDGNLGIVLPLACIAQWHRAGKRFAFPIEVIGFAEEEG 120 +APAL TGSHFDTVR+ G+YDGNLG++LP+AC+A+W+R GKRF F IEV+GFAEEEG Sbjct: 77 --PDAPALLTGSHFDTVRDGGRYDGNLGVILPIACVAEWNRQGKRFPFAIEVVGFAEEEG 134 Query: 121 VRFKATLLGSRTVAGTFDQAVLENVDGEGISMRQAIRAAGLDPAGIAGDAWSPASVAAFV 180 VRFKATLLGSR +AGTFD VL+NVD G +MRQ +R AG D A + + VAAF+ Sbjct: 135 VRFKATLLGSRAIAGTFDNNVLDNVDDSGKTMRQVMREAGFDAAALPAARHDSSKVAAFI 194 Query: 181 EVHIEQGPLLLNEGLPVGVVTAISGASRFMAEVRGLAGHAGTVPMHLRRDAAMAAAEIGL 240 EVHIEQGP+LLNE LPVGVVTAISGA+RF+ E+ GLAGHAGTVPM +RRDAAMA AEIGL Sbjct: 195 EVHIEQGPVLLNENLPVGVVTAISGATRFIVELEGLAGHAGTVPMDMRRDAAMAGAEIGL 254 Query: 241 YIERRCGIKPGLVGTMGILEVVQGAANVVPGLASFSIDIRAEEDAVREDAVADVEAEIAR 300 YIE+RCG KPGLVGT+G V GAANVVPG A FSIDIRA DA RE AV DV AEI R Sbjct: 255 YIEKRCGGKPGLVGTVGQFNVPNGAANVVPGRAVFSIDIRAGADAEREAAVNDVLAEIER 314 Query: 301 ICARRNVTITLRKTHQAGSVPCADRLQQQLANAIDACGLPVRHLPSGAGH 350 +CARRNV +RKTH+A SVPCA LQ+Q A AI G+PVRHLPSGAGH Sbjct: 315 VCARRNVRTQVRKTHEAKSVPCAPWLQEQWAAAIARQGVPVRHLPSGAGH 364 >ref|YP_004687312.1| N-carbamoyl-L-amino acid hydrolase AmaB [Cupriavidus necator N-1] gb|AEI78831.1| N-carbamoyl-L-amino acid hydrolase AmaB [Cupriavidus necator N-1] Length = 418 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 245/350 (70%), Positives = 276/350 (78%), Gaps = 2/350 (0%) Query: 1 MRRADVLAVHTEAPGMMTRTYLTPVHHAAAQQLSEWMSAAGMQVRRDDAGNVIGRYEATP 60 M AD LAVHTE PGM+TRTYLT HH AA QL+EWM AGM VRRD AGNVIGRYE T Sbjct: 17 MAWADALAVHTEQPGMLTRTYLTEAHHGAAAQLTEWMQQAGMTVRRDAAGNVIGRYEGTT 76 Query: 61 GHENAPALATGSHFDTVRNAGKYDGNLGIVLPLACIAQWHRAGKRFAFPIEVIGFAEEEG 120 +APAL TGSHFDTVR+ G+YDGNLG++LP AC+A+W+R GKRF F IEV+GFAEEEG Sbjct: 77 --PDAPALLTGSHFDTVRDGGRYDGNLGVILPTACVAEWNRQGKRFPFAIEVVGFAEEEG 134 Query: 121 VRFKATLLGSRTVAGTFDQAVLENVDGEGISMRQAIRAAGLDPAGIAGDAWSPASVAAFV 180 VRFKATLLGSR +AGTFD VL+NVD G +MRQ +R AG DPA + + VAAF+ Sbjct: 135 VRFKATLLGSRAIAGTFDNNVLDNVDDSGKTMRQVMREAGFDPAALPAARHDRSQVAAFI 194 Query: 181 EVHIEQGPLLLNEGLPVGVVTAISGASRFMAEVRGLAGHAGTVPMHLRRDAAMAAAEIGL 240 EVHIEQGP+LLNE LPVGVVTAISGA+RF+ E+ GLAGHAGTVPM +RRDAAMA AEIGL Sbjct: 195 EVHIEQGPVLLNENLPVGVVTAISGATRFIVELEGLAGHAGTVPMDMRRDAAMAGAEIGL 254 Query: 241 YIERRCGIKPGLVGTMGILEVVQGAANVVPGLASFSIDIRAEEDAVREDAVADVEAEIAR 300 YIE+RCG KPGLVGT+G V GA NVVPG A FSIDIR+ DA RE A DV AEI R Sbjct: 255 YIEKRCGGKPGLVGTVGQFNVPNGATNVVPGHAVFSIDIRSGIDAEREAAANDVLAEIER 314 Query: 301 ICARRNVTITLRKTHQAGSVPCADRLQQQLANAIDACGLPVRHLPSGAGH 350 +CARRNV +RKTH+A SVPCA LQ+Q A AI G+PVRHLPSGAGH Sbjct: 315 VCARRNVRAQVRKTHEAKSVPCAPWLQEQWAAAIARQGVPVRHLPSGAGH 364