BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3905.p (582 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776634.1| TonB-dependent receptor protein [Herbaspiril... 893 0.0 ref|YP_555318.1| putative TonB-dependent siderophore receptor [B... 594 e-167 ref|YP_001098423.1| putative TonB-dependent receptor protein [He... 432 e-119 ref|YP_001601879.1| tTnB-dependent receptor [Gluconacetobacter d... 427 e-117 ref|ZP_04764522.1| TonB-dependent receptor [Acidovorax delafield... 426 e-117 >ref|YP_003776634.1| TonB-dependent receptor protein [Herbaspirillum seropedicae SmR1] gb|ADJ64726.1| TonB-dependent receptor protein [Herbaspirillum seropedicae SmR1] Length = 755 Score = 893 bits (2308), Expect = 0.0, Method: Composition-based stats. Identities = 480/583 (82%), Positives = 518/583 (88%), Gaps = 2/583 (0%) Query: 1 MPQQFEASIKAQYAQQDFSQYGASGTYRAQEYNVGLGNRRGALAWRFSVNHLDSYSQPVT 60 MP++FEASIK QYAQQDFSQYG SGTYRAQE NVGLGNR GALAWRFSVNHLDSYS PVT Sbjct: 174 MPERFEASIKTQYAQQDFSQYGVSGTYRAQEVNVGLGNRSGALAWRFSVNHLDSYSPPVT 233 Query: 61 YITATSLPAGTTGAVLAQDRTGKNLYVLGVGNLTHTVQDTARLKVSYDFTPALTATYTLG 120 Y+TA + PAG+TGAV QDR G+N+ VLG GNLTHTVQDTARLK+SYDFTP LTATYTLG Sbjct: 234 YVTAATAPAGSTGAVATQDRLGRNIQVLGAGNLTHTVQDTARLKLSYDFTPTLTATYTLG 293 Query: 121 FWQNQASANPQSFLKTASGATAYTSGFSSNDVDQQQWMQSLELRSKTGGEWDWQLAASTL 180 FWQNQA+A P +FL+ A GA YTSGF+SN V+QQQWMQ LE+RS T G WDWQ+AAS + Sbjct: 294 FWQNQANATPHTFLRNAVGAPVYTSGFNSNTVEQQQWMQGLEVRSHTDGVWDWQVAASAI 353 Query: 181 SASRDLTRTSTATFPAGQSGGAGTIADASGTGWSTVDAKGIWRPQGSAQVISFGAHVDRY 240 S+SRDLTRTST T PAG +G AG+IADASGTGWST+DAKGIWRPQGSAQVIS GAH DRY Sbjct: 354 SSSRDLTRTSTTTLPAGLAG-AGSIADASGTGWSTLDAKGIWRPQGSAQVISVGAHYDRY 412 Query: 241 TLATPTWNTSNWVSGGNGTLASDSRGKTETSALWAQDVWRLSSSLKATLGARYEWWRAFD 300 TLATPTWNTSNW SG G L +DSRGKT TSALWAQD WR S KATLGARYEWWRAF Sbjct: 413 TLATPTWNTSNWSSGSAGALNADSRGKTTTSALWAQDAWRFSPGWKATLGARYEWWRAFG 472 Query: 301 GRNVSTSGSTV-FAVNQPEVSHSGLSPKASLAWALADDWVTTLSAGRALRFPTVGELYQN 359 G N ST+GS V F V QPEVSHSGLSPKA+LAWALA+DW+ TLS GRALRFPTVGELYQN Sbjct: 473 GFNYSTNGSGVGFPVTQPEVSHSGLSPKATLAWALAEDWLVTLSTGRALRFPTVGELYQN 532 Query: 360 VLLNGVYLQANPNLKPEKVWSTELAIEKQLQEGQGKWRVSLFEERVSDALISQSSTIGSG 419 V + V+LQANPNLKPEKVWSTELAIE+QL+EGQGKWRVSLFEERVSDALISQSSTIGS Sbjct: 533 VSVGSVFLQANPNLKPEKVWSTELAIERQLKEGQGKWRVSLFEERVSDALISQSSTIGSS 592 Query: 420 VASFTQNVDRTRQRGIEAAFERNDLLVRGFSLNGSVTWVDARILENKGYVATTAGATSVG 479 VASFTQNVDRTRQRGIEAAFERND+LVRGFSLNGSVTWVDARILENK YV T AGA+SVG Sbjct: 593 VASFTQNVDRTRQRGIEAAFERNDVLVRGFSLNGSVTWVDARILENKAYVPTIAGASSVG 652 Query: 480 KRTPYVPEWRATLVASYKPDDRWTYTVAGRYSGRVYATVDNTDINTHTYQGFDGYTVFDA 539 +RTPYVPEWRATLVASY+PD+ WTYT+AGRYS RVYATVDNTDINTHTYQGFDGYTVFDA Sbjct: 653 QRTPYVPEWRATLVASYQPDEHWTYTLAGRYSARVYATVDNTDINTHTYQGFDGYTVFDA 712 Query: 540 RVRYRIDRHWSGAVGVDNLTNRDYFLFHPFPQRTVFAELKYNF 582 R+RYR DRHWS A+GVDNL NR YFLFHPFPQRTV AELKY+F Sbjct: 713 RLRYRFDRHWSAALGVDNLGNRSYFLFHPFPQRTVLAELKYDF 755 >ref|YP_555318.1| putative TonB-dependent siderophore receptor [Burkholderia xenovorans LB400] gb|ABE35968.1| Putative TonB-dependent siderophore receptor [Burkholderia xenovorans LB400] Length = 821 Score = 594 bits (1531), Expect = e-167, Method: Composition-based stats. Identities = 320/613 (52%), Positives = 423/613 (69%), Gaps = 33/613 (5%) Query: 1 MPQQFEASIKAQYAQQDFSQYGASGTYRAQEYNVGLGNRRGALAWRFSVNHLDSYSQPVT 60 MP+ FEAS+ A Q FSQYG A +Y+ LG+R G L+W FS NHL+S+SQP+T Sbjct: 211 MPKHFEASVDVTGAIQHFSQYGTHTGEPAAQYSATLGDRIGKLSWWFSANHLNSFSQPLT 270 Query: 61 Y--ITATSLPAGTT-----GAVLAQDRTGKNLYVLGVGNLTHTVQDTARLKVSYDFTPAL 113 + ++ + PAG G +RTG + V+G GN HT+QD A LK++YDFTP L Sbjct: 271 FGTVSQSKTPAGAGLPVIGGGFADTNRTGGAIQVIGAGNFIHTIQDDATLKLAYDFTPTL 330 Query: 114 TATYTLGFWQNQASANPQSFLKTASGATAYTSG-------------------FSSNDVDQ 154 +ATYTLG+WQN++ A +++L A+GA Y +G FSSN+V+Q Sbjct: 331 SATYTLGYWQNRSKAQAETYLYDANGAPYYGAGSGPVNLGGFAYSASTLAGQFSSNNVEQ 390 Query: 155 QQWMQSLELRSKTGGEWDWQLAASTLSASRDLTRTSTATFPAGQSGGAGTIADASGTGWS 214 + MQS+++ + T G +DWQL S + +DL+R ST +PA +GGAG D SGTGWS Sbjct: 391 EHLMQSIDVGTHTQGRFDWQLIVSNMDYLQDLSRLSTGLYPAALTGGAGRTTDMSGTGWS 450 Query: 215 TVDAKGIWRPQG--SAQVISFGAHVDRYTLATPTWNTSNWVSGGNGTLASDSRGKTETSA 272 T+D KG WRPQG A ++SFGAH D++ L +PT+NT++W+SGGNG+L S+S G+TETSA Sbjct: 451 TLDLKGTWRPQGMQGANIVSFGAHYDQFRLESPTFNTADWISGGNGSLYSNSLGRTETSA 510 Query: 273 LWAQDVWRLSSSLKATLGARYEWWRAFDGRNVST-SGSTVFAVNQPEVSHSGLSPKASLA 331 +WAQDVWR++ +L ATLG RYEWWRA+DG N ST S +V QP V SG SPKASL Sbjct: 511 IWAQDVWRVAPALTATLGGRYEWWRAYDGFNFSTGSNGAGVSVTQPGVDKSGFSPKASLN 570 Query: 332 WALADDWVTTLSAGRALRFPTVGELYQNVLLNGVYLQANPNLKPEKVWSTELAIEKQLQE 391 AL D W T S GRALRFPTVGELYQ V +LQANP LKPE VWS ELA+E+ Sbjct: 571 LALTDTWSVTGSIGRALRFPTVGELYQTVQTGATFLQANPFLKPEDVWSGELALERDTNS 630 Query: 392 GQGKWRVSLFEERVSDALISQSSTIG--SGVASFTQNVDRTRQRGIEAAFERNDLLVRGF 449 G R+S+F+E V DALISQ++ + + SFTQNV +TR+ G+E A +++D++V+G Sbjct: 631 GH--LRLSVFDEYVYDALISQTALVPGFATPVSFTQNVGKTRETGVELAGQQDDVVVKGL 688 Query: 450 SLNGSVTWVDARILENKGYVATTAGATSVGKRTPYVPEWRATLVASYKPDDRWTYTVAGR 509 SL+G++T+ ++ IL + G+ AT+ G T+VGKR PY+P WRATL A+Y+PD W YT+A R Sbjct: 689 SLSGNLTYTNSDILSDDGFRATSPGDTAVGKRVPYIPSWRATLAATYRPDAHWAYTLAAR 748 Query: 510 YSGRVYATVDNTDINTHTYQGFDGYTVFDARVRYRIDRHWSGAVGVDNLTNRDYFLFHPF 569 YS R++ATVDN+D N T+ GF + V DARV Y+ D HW GA+GVDNL NR YFL+HPF Sbjct: 749 YSSRLFATVDNSDANPATFMGFQRFFVMDARVHYQYDHHWGGALGVDNLNNRKYFLYHPF 808 Query: 570 PQRTVFAELKYNF 582 PQRT +AELKY+F Sbjct: 809 PQRTFYAELKYDF 821 >ref|YP_001098423.1| putative TonB-dependent receptor protein [Herminiimonas arsenicoxydans] emb|CAL60294.1| putative TonB-dependent receptor protein [Herminiimonas arsenicoxydans] Length = 763 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 254/608 (41%), Positives = 358/608 (58%), Gaps = 40/608 (6%) Query: 1 MPQQFEASIKAQYAQQDFSQYGASGTYRAQEYNVGLGNRRGALAWRFSVNHLDSYSQPVT 60 MP +FE K Q++ YG T+ + +V LG+R GA +W + +HLDS QP+ Sbjct: 169 MPDKFEGHAKVSGFTQNYDLYGTHSTFSGHQESVSLGDRNGAWSWWINASHLDSDGQPIV 228 Query: 61 YITAT----SLPAGT----TGAVLAQDRTGKNLYVLGVGNLTHTVQDTARLKVSYDFTPA 112 ++ T S P G TGAV +D +LG T T QD ++K++YDF+P Sbjct: 229 IVSKTPCGSSCPVGAPTPVTGAVTGKDTKNNPTQILGTTGQTATTQDQGKIKLAYDFSPT 288 Query: 113 LTATYTLGFWQNQASANPQSFLKTASGATAYT--------------SGFSSNDVDQQQWM 158 L A+Y LG+WQN P+++L+ A+G Y+ + FS+ DQ+ M Sbjct: 289 LRASYLLGWWQNNTDRMPETYLRDAAGNPVYSGNVSIDGSTYNLKPTDFSATRSDQRHVM 348 Query: 159 QSLELRSKTGGEWDWQLAASTLSASRDLTRTSTATFPAGQSGGAGTIADASGTGWSTVDA 218 Q+L L+S T G WDW++AAS +DL R S +P GG GT+ D SGTGW+T Sbjct: 349 QALSLKSNTRGTWDWEVAASLYDYQKDLVRASGTAYPNAAVGGTGTLTDMSGTGWNTFAL 408 Query: 219 KGIWRPQGS--AQVISFGAHVDRYTLATPTWNTSNWVSGGNGTLASDSRGKTETSALWAQ 276 KG WRP G+ A ++ FG D Y L T T+NTS+W++ GT +S G T +L+AQ Sbjct: 409 KGTWRPDGTEGAHIVDFGYQRDAYQLRTSTFNTSDWIAANAGTRSSSFNGDTNLQSLYAQ 468 Query: 277 DVWRLSSSLKATLGARYEWWRAFDGRNVSTSGSTVFAVNQPEVSHSGLSPKASLAWALAD 336 D WR++ + K TLG R E W+A +G ++S S +TV ++ E + SPKA++A+ Sbjct: 469 DTWRIAKNWKTTLGGRLEQWQASNG-SLSNSNTTVAFNDRNE---NYFSPKAAIAYQATP 524 Query: 337 DWVTTLSAGRALRFPTVGELYQNVL--LNGVYLQANPNLKPEKVWSTELAIEKQLQEGQG 394 W S GRA+RFPTV ELYQ L + + +PNLKPEK W++EL E+ L G G Sbjct: 525 QWALKASLGRAIRFPTVSELYQGSLDPTTNILSKNDPNLKPEKSWTSELTAERDL--GNG 582 Query: 395 KWRVSLFEERVSDALISQSSTIGSGVASFTQNVDRTRQRGIEAAFERNDLLVRGFSLNGS 454 R ++F E DAL SQ + + + V + QNVD R G+E A++ ND+ +RG L+GS Sbjct: 583 LLRATIFHEDTKDALYSQLN-VATNVTNI-QNVDHMRTTGLEVAYQANDIAIRGLDLSGS 640 Query: 455 VTWVDARILENKGYVATTAGATSVGKRTPYVPEWRATLVASYKPDDRWTYTVAGRYSGRV 514 VT+ D++ + N A SVGK P VP+WRA+ +ASY+PDDRWTYT RYSGR Sbjct: 641 VTFADSKTVRNDNNPA------SVGKWQPRVPKWRASALASYRPDDRWTYTFGARYSGRQ 694 Query: 515 YATVDNTDINTHTYQGFDGYTVFDARVRYRIDRHWSGAVGVDNLTNRDYFLFHPFPQRTV 574 Y +DN+D+N Y G + V D RVRYRI + W+ ++G+DNL N+ Y+ FHP+PQRTV Sbjct: 695 YGQLDNSDVNGFAYTGVSSFFVTDVRVRYRIAKQWTASLGIDNLNNKKYWNFHPYPQRTV 754 Query: 575 FAELKYNF 582 AELK++ Sbjct: 755 LAELKFDL 762 >ref|YP_001601879.1| tTnB-dependent receptor [Gluconacetobacter diazotrophicus PAl 5] ref|YP_002276213.1| TonB-dependent receptor [Gluconacetobacter diazotrophicus PAl 5] emb|CAP55576.1| putative tTnB-dependent receptor [Gluconacetobacter diazotrophicus PAl 5] gb|ACI51598.1| TonB-dependent receptor [Gluconacetobacter diazotrophicus PAl 5] Length = 796 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 246/596 (41%), Positives = 348/596 (58%), Gaps = 26/596 (4%) Query: 1 MPQQFEASIKAQYAQQDFSQYGASGTYRAQEYNVGLGNRRGALAWRFSVNHLDSYSQPVT 60 MP +F A++K + Q + Y G Y V +G+R G L+W FS N +S QP+ Sbjct: 213 MPDRFTATVKQTGSVQTYDAYRTRGNYGTANSAVTIGDRIGRLSWLFSANREESLGQPLF 272 Query: 61 YITATSLPAGTTGAVLAQDRTGKNLYVLGVGNLTHTVQDTARLKVSYDFTPALTATYTLG 120 ++T++ +PAGTTG + A +TG V+G G L H+ D L+++YDFTP L YT+G Sbjct: 273 FVTSSGMPAGTTGGIAALSKTGSVANVMGAGGLQHSTTDNVTLRLAYDFTPWLRLNYTVG 332 Query: 121 FWQNQASANPQSFLKTASGATAY--TSGFSSN--DVDQQQWMQSLELRSKTGGEWDWQLA 176 +W NQ A QS+L A+GA + +GF+++ D+Q M ++ L+++T G WD + Sbjct: 333 YWDNQTRARSQSYLTNAAGAATFGGVAGFANDTYTYDEQHLMNAVSLKTRTQGHWDGEAI 392 Query: 177 ASTLSASRDLTRTSTATFPAGQSGGA-----GTIADASGTGWSTVDAKGIWRPQ--GSAQ 229 + +D+ R PAG GG G IA G+GW T D KGIWRP G A Sbjct: 393 FTDYDYLKDIQRN-----PAGVLGGTNFTPNGYIARMDGSGWMTADVKGIWRPSGVGGAH 447 Query: 230 VISFGAHVDRYTLATPTWNTSNWVS---GGNGTLASDSRGKTETSALWAQDVWRLSSSLK 286 +SFG H D+Y L PT+NT NW S GNGTL S RG T T ALWAQ+ W+ + Sbjct: 448 ELSFGGHRDQYDLENPTYNTGNWASSPAAGNGTLHSSGRGTTTTYALWAQEAWKFAPGFT 507 Query: 287 ATLGARYEWWRAFDGRNVSTSGSTVFAVNQPEVSHSGLSPKASLAWALADDWVTTLSAGR 346 T+G R E+WRA +G N + + A +QP + SPKA+LAW + DW LS G Sbjct: 508 LTVGGRLEFWRASNGFNQAGA----VAASQPPEHSTNFSPKATLAWRINPDWTAKLSFGE 563 Query: 347 ALRFPTVGELYQNVLLNGVYLQANPNLKPEKVWSTELAIEKQLQEGQGKWRVSLFEERVS 406 A R+PTV ELYQ V G Y N L+PE+V+S+E IE++ G R+SLF+E Sbjct: 564 AWRYPTVSELYQIVSTGGTYAVPNATLRPEQVFSSEAMIERRTHSGS--LRLSLFQENTH 621 Query: 407 DALISQSSTIGSGVASFTQNVDRTRQRGIEAAFERNDLLVRGFSLNGSVTWVDARILENK 466 +ALISQS+ + + + QNV R RG+E ER DLL++GF L+ S+T+VD+RIL + Sbjct: 622 NALISQSTLLNNIYTTTFQNVTEVRNRGVEFVAERRDLLIKGFDLSNSLTYVDSRILSDP 681 Query: 467 GYVATTAGATSVGKRTPYVPEWRATLVASYKPDDRWTYTVAGRYSGRVYATVDNTDINTH 526 G+ ++T G T+ GK PYVP+WR T+ A++ R + A RY GR+Y+T+DNTD H Sbjct: 682 GFQSST-GTTAAGKHVPYVPDWRDTVQATWHATKRLDLSAALRYQGRMYSTLDNTDRVGH 740 Query: 527 TYQGFDGYTVFDARVRYRIDRHWSGAVGVDNLTNRDYFLFHPFPQRTVFAELKYNF 582 + FD + V D V + + + G+DN+ N Y+ +HPFP RT A+LK +F Sbjct: 741 VFGAFDKFLVADVHVHWHVTGPLTFDAGIDNINNARYYEYHPFPMRTYVADLKASF 796 >ref|ZP_04764522.1| TonB-dependent receptor [Acidovorax delafieldii 2AN] gb|EER58674.1| TonB-dependent receptor [Acidovorax delafieldii 2AN] Length = 768 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 245/606 (40%), Positives = 355/606 (58%), Gaps = 38/606 (6%) Query: 1 MPQQFEASIKAQYAQQDFSQYGASGTYRAQEYNVGLGNRRGALAWRFSVNHLDSYSQPVT 60 MP +FEA + Y Q F Y SGTY ++ + +GN+ G +W + N DS QP+T Sbjct: 173 MPTKFEAHGQVSYQHQPFDLYNTSGTYGGKQVSASVGNKNGDWSWFLNFNKTDSEGQPLT 232 Query: 61 YIT-----ATSLPAGT--TGAVLAQDRTGKNLYVLGVGNLTHTVQDTARLKVSYDFTPAL 113 + T T AGT TGAVL +R+ + Y+LG HT QD + K++YDF+P + Sbjct: 233 FPTRLVSAGTVGNAGTPVTGAVLGNNRSNQPWYLLGTATQYHTQQDHIKAKIAYDFSPTV 292 Query: 114 TATYTLGFWQNQASANPQSFLKTASGATAY----------------TSGFSSNDVDQQQW 157 A YT G+W N++ P S+L+ A+G Y + F+ ++ D + Sbjct: 293 RAAYTFGWWHNESEGRPTSYLRDANGNAVYGGTVNINVNGRSFALTPTDFNVSNEDLTHF 352 Query: 158 MQSLELRSKTGGEWDWQLAASTLSASRDLTRTSTATFPAGQSGGAGTIADASGTGWSTVD 217 M L ++S+T G +DW++AAS D R +T PA +GGAG I ++ GTGW+T+ Sbjct: 353 MHGLSVKSQTQGVFDWEVAASLYDYQTDTLRAATVALPAALNGGAGRIVNSKGTGWNTLA 412 Query: 218 AKGIWRPQG--SAQVISFGAHVDRYTLATPTWNTSNWVSGGNGTLASDSRGKTETSALWA 275 AKG WRP+G ++ FG D Y L T TSNW+SG G G T+ LWA Sbjct: 413 AKGTWRPEGVQGTHIVDFGLQRDSYQLRTIENATSNWISGDAGARNQAFNGDTQLIGLWA 472 Query: 276 QDVWRLSSSLKATLGARYEWWRAFDGRNVSTSGSTVFAVNQPEVSHSGLSPKASLAWALA 335 QD W+++ KA LGAR E W A +G+ +G+ V+ E + + +SPKA++A+ + Sbjct: 473 QDTWKIAPQWKAVLGARAERWSASNGQ----TGNATTTVSHTERNETYVSPKAAVAYQAS 528 Query: 336 DDWVTTLSAGRALRFPTVGELYQN-VLLNGVYLQANPNLKPEKVWSTELAIEKQLQEGQG 394 D WV S GRA+R PTV ELYQ + +G + +PNLKPEK W+TEL E+ + G G Sbjct: 529 DLWVLKASTGRAVRMPTVSELYQGGINGSGTLINNDPNLKPEKSWTTELTAERDM--GNG 586 Query: 395 KWRVSLFEERVSDALISQSSTIGSGVASFTQNVDRTRQRGIEAAFERNDLLVRGFSLNGS 454 R++ F ER DAL SQ++ + + + QNVD R +G+E A++ ++ VRG L GS Sbjct: 587 LLRLTAFFERTHDALYSQTNVLVTPNVTNVQNVDEIRTKGLELAYQAANVFVRGLELGGS 646 Query: 455 VTWVDARILENKGYVATTAGATSVGKRTPYVPEWRATLVASYKPDDRWTYTVAGRYSGRV 514 +TW ++I +N + A SVG+ P +PEWRA+ VA+Y+PD++W+YT+ RYSG+ Sbjct: 647 LTWTHSKITKNDKFPA------SVGQWQPRIPEWRASAVATYRPDEKWSYTLGARYSGKQ 700 Query: 515 YATVDNTDINTHTYQGFDGYTVFDARVRYRIDRHWSGAVGVDNLTNRDYFLFHPFPQRTV 574 Y+T+DN+D N YQG Y D RVRY+I + S AVG+DNL N ++ FHP+PQR+ Sbjct: 701 YSTLDNSDPNGFAYQGASRYFTTDVRVRYQISKQVSAAVGIDNLNNYQFWNFHPYPQRSY 760 Query: 575 FAELKY 580 FAELK+ Sbjct: 761 FAELKW 766