BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3899.p (542 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001352596.1| methyl-accepting chemotaxis protein I [Janth... 481 e-133 ref|ZP_08406906.1| methyl-accepting chemotaxis protein I [Hylemo... 384 e-104 ref|ZP_06685906.1| methyl-accepting chemotaxis protein I [Achrom... 318 2e-84 gb|EGP45643.1| methyl-accepting chemotaxis protein I 2 [Achromob... 316 8e-84 gb|EFV82954.1| Tsr2 protein [Achromobacter xylosoxidans C54] 306 9e-81 >ref|YP_001352596.1| methyl-accepting chemotaxis protein I [Janthinobacterium sp. Marseille] gb|ABR91521.1| methyl-accepting chemotaxis protein I [Janthinobacterium sp. Marseille] Length = 544 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 295/518 (56%), Positives = 377/518 (72%) Query: 1 MLNRMKLRTGLMLVLGLLTLALWLAAGMAWQGARSASRATVALIELSDRHIQPLHDTERL 60 M +++K+RTGL+ VLG+ ++ALW A M+W AR +++A A+I+LSD IQPLHDTERL Sbjct: 1 MFSKLKIRTGLLFVLGMFSIALWTAVFMSWTYARQSAQALEAVIKLSDSQIQPLHDTERL 60 Query: 61 FLNTLINMDNAYINLVKGDEIKSNDYSRRASAALQDARKAFDGYRQGLTPSALAEPEALR 120 L+TLINMDNAYINLVK D++ +NDY+R+ASA+ Q+ +KAFD YR+ + + ++ Sbjct: 61 LLSTLINMDNAYINLVKSDQVIANDYTRKASASFQEGKKAFDRYREAIKDDSDLADRSVN 120 Query: 121 VSAAYDSYIKVLNLREVALYDVSLEDYAAATVSAEAADREFAATLRAVIQHAEQVKDGLR 180 V AYD Y +V+ RE ALYDVSL++YAAAT AE AD FA+ LR +I HAE V+D LR Sbjct: 121 VIRAYDRYAEVIGKREEALYDVSLDNYAAATTDAEQADSVFASALREMINHAEMVRDNLR 180 Query: 181 LASERRSDQATLLAVAMLAASVLLIAICWLLFDRLLLQPLKRAADHFDRIADGDLSQAVQ 240 + SERR A LA M S+LL+ W F+R+LLQPLK HFDRIA GDL+ V Sbjct: 181 VESERRFMIAAYLATGMFVFSLLLVGFYWFFFNRVLLQPLKEVGAHFDRIAGGDLTAQVN 240 Query: 241 GISGNEIGVLLAALQRMQHGVALTVGDIREATRDLHHGAADIAQGNGELAQRTQAQASTL 300 +S NEIG LLAALQRMQ G+ TV IR AT D+ H A DIA GN EL+ RT+ QAS L Sbjct: 241 VVSNNEIGALLAALQRMQQGLLQTVSTIRRATEDVDHSARDIAVGNVELSSRTEQQASAL 300 Query: 301 ETTAATLERLSGAVRNNAQNAERTNALAAAAASDAERGGQVMSGIAGAMAQVTAGAGRIS 360 E TA+ LE L+ AV+ NA+N +TN LA+ AA DA RGG++MS + M +V+A + +IS Sbjct: 301 EETASALEELAAAVKQNAENTHQTNRLASDAAGDAVRGGEMMSDLVKTMGKVSASSSKIS 360 Query: 361 DIVSLIDGIAFQTNILALNASVEAARAGSQGRGFAVVASEVRSLALRSAEAAREVKDLIA 420 +IV +IDGIAFQTNILALNA+VEAARAG QGRGFAVVA+EVRSLALRSA+AA+EVK LI Sbjct: 361 EIVGVIDGIAFQTNILALNAAVEAARAGVQGRGFAVVAAEVRSLALRSAQAAKEVKGLIG 420 Query: 421 ASIGSVDQAAQQVKEADQAIVQIVQSFGNVMTTVNEIAMATREQAEGISQVSLSLAEMDR 480 S +D + QV EA +A+ +IV S NVM+T+ EI+ AT EQ+ G+ QVSL++ +MDR Sbjct: 421 ESSSYIDLGSGQVTEAGKAMQKIVTSVHNVMSTMQEISTATSEQSVGLEQVSLAVVQMDR 480 Query: 481 ATQQNAALVEQTAAAADALTERAATLTASVAVFTLTAP 518 +TQQNA LVEQTA AA+ LT +A L SV+VF P Sbjct: 481 STQQNATLVEQTANAANDLTAQARRLVESVSVFRTANP 518 >ref|ZP_08406906.1| methyl-accepting chemotaxis protein I [Hylemonella gracilis ATCC 19624] gb|EGI75949.1| methyl-accepting chemotaxis protein I [Hylemonella gracilis ATCC 19624] Length = 560 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 282/539 (52%), Positives = 355/539 (65%), Gaps = 5/539 (0%) Query: 1 MLNRMKLRTGLMLVLGLLTLALWLAAGMAWQGARSASRATVALIELSDRHIQPLHDTERL 60 ML+R+++RTGL LVLG+ +LALW +AG+AW GAR A R A L D+ I+PLH+T RL Sbjct: 1 MLSRLQIRTGLWLVLGIFSLALWASAGLAWLGARQAERDIDATAVL-DQRIKPLHETGRL 59 Query: 61 FLNTLINMDNAYINLVKGDEIKSNDYSRRASAALQDARKAFDGYRQGLTPSALAEPEALR 120 L L+ M+NAYI L +GD++ S D R+ASAA+Q A KAF+ YR + +P A R Sbjct: 60 LLTALVGMNNAYIQLQRGDQVASTDEVRKASAAVQAAAKAFETYRAAVPAD---DPHARR 116 Query: 121 VSAAYDSYIKVLNLREVALYDVSLEDYAAATVSAEAADREFAATLRAVIQHAEQVKDGLR 180 AY+ Y +VL LRE ALY+VSL+ Y AA+ AE AD++F A LRA I E +D LR Sbjct: 117 AVQAYERYARVLGLREEALYEVSLDRYVAASGEAEQADKDFDAALRAAIAEGEAQRDALR 176 Query: 181 LASERRSDQATLLAVAMLAASVLLIAICWLLFDRLLLQPLKRAADHFDRIADGDLSQAVQ 240 + SE R+ ++ LA+ + S+ + A+C L F + LL PL +A HFDRIA GDLS AV Sbjct: 177 VESETRATRSGGLALGLFVLSLGMAALCLLFFRQRLLGPLTQAGRHFDRIAAGDLSGAVA 236 Query: 241 GISGNEIGVLLAALQRMQHGVALTVGDIREATRDLHHGAADIAQGNGELAQRTQAQASTL 300 +EIG LL AL RMQ G+A TV IR + G IA GN L+ RT+ QA+ L Sbjct: 237 SARQDEIGALLTALDRMQRGLAHTVAAIRHGASAVDEGTRGIADGNQALSSRTEQQAAAL 296 Query: 301 ETTAATLERLSGAVRNNAQNAERTNALAAAAASDAERGGQVMSGIAGAMAQVTAGAGRIS 360 E TAATLE LS AVR NA +T LA AA+ +A GGQ ++ I M QV+ A RI Sbjct: 297 EQTAATLEELSAAVRQNAGQTSQTRDLARAASDEAALGGQAVARITETMQQVSTHARRIV 356 Query: 361 DIVSLIDGIAFQTNILALNASVEAARAGSQGRGFAVVASEVRSLALRSAEAAREVKDLIA 420 DIV +IDGIAFQTN+LALNA+VEAARAG QG+GFAVVA EVRSLA RSA AA EVKDLI Sbjct: 357 DIVGIIDGIAFQTNLLALNAAVEAARAGPQGKGFAVVAGEVRSLAQRSARAAAEVKDLIE 416 Query: 421 ASIGSVDQAAQQVKEADQAIVQIVQSFGNVMTTVNEIAMATREQAEGISQVSLSLAEMDR 480 S SV A+Q EAD+ + Q+V+S +M T++EIA AT EQ++GI QVSL++ EMDR Sbjct: 417 QSSASVALGAEQATEADRTMRQVVKSVEQLMQTLDEIARATAEQSDGIQQVSLAVTEMDR 476 Query: 481 ATQQNAALVEQTAAAADALTERAATLTASVAVFTLTAPQAMALAGTGGSPALPHHPLAA 539 ATQ+NA LVEQTA A AL ++ L +V+VF L P A A PA PL A Sbjct: 477 ATQENAGLVEQTARGAKALKSQSDQLVETVSVFRL-EPGAPQAAPAHPRPASDFQPLLA 534 >ref|ZP_06685906.1| methyl-accepting chemotaxis protein I [Achromobacter piechaudii ATCC 43553] gb|EFF77181.1| methyl-accepting chemotaxis protein I [Achromobacter piechaudii ATCC 43553] Length = 536 Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats. Identities = 226/517 (43%), Positives = 329/517 (63%) Query: 1 MLNRMKLRTGLMLVLGLLTLALWLAAGMAWQGARSASRATVALIELSDRHIQPLHDTERL 60 ML +K+RTGL+ VL L LAL + GM W A+ A L ++ +PL++T+ L Sbjct: 1 MLKNLKIRTGLLAVLTLFVLALATSTGMGWLFAKVADEGVDDLNRVATDQTRPLYETQVL 60 Query: 61 FLNTLINMDNAYINLVKGDEIKSNDYSRRASAALQDARKAFDGYRQGLTPSALAEPEALR 120 L T I + AY+++ G ++ +A+ +L DAR+ ++ Y+ + + + Sbjct: 61 LLRTRITLVAAYLDVQAGRADQAQASVEQAAKSLADARRRYELYQSVPKRTDASRQMSAD 120 Query: 121 VSAAYDSYIKVLNLREVALYDVSLEDYAAATVSAEAADREFAATLRAVIQHAEQVKDGLR 180 + + + +Y++ + AL S E Y AA A AAD F LRA++ H E+ + Sbjct: 121 LDSVFTAYVRGIEDLNEALRKQSAEGYVAAVTEARAADARFEERLRAILAHTERRAVEIN 180 Query: 181 LASERRSDQATLLAVAMLAASVLLIAICWLLFDRLLLQPLKRAADHFDRIADGDLSQAVQ 240 AS+RR QA + A+ ML+ + +L CW R +L PLK AA HFDRIA GDL+Q V Sbjct: 181 DASDRRYIQAEIAAIVMLSLAFILALGCWRFISRQVLSPLKEAAVHFDRIASGDLTQRVS 240 Query: 241 GISGNEIGVLLAALQRMQHGVALTVGDIREATRDLHHGAADIAQGNGELAQRTQAQASTL 300 + NEIGVL AAL+RMQ + TV ++R + +++ GAA+IA GN L+ RT+ QA++L Sbjct: 241 TAADNEIGVLFAALKRMQESLTRTVAEVRRSVNEINTGAAEIASGNTNLSSRTEEQAASL 300 Query: 301 ETTAATLERLSGAVRNNAQNAERTNALAAAAASDAERGGQVMSGIAGAMAQVTAGAGRIS 360 E TAA++E L+ AV+ N ++A + NALAA + A RGG+ ++ + MA+++ + RI+ Sbjct: 301 EETAASMEELATAVKQNTEHAHQANALAAESRGVAMRGGEAVNQVVETMARISDSSRRIA 360 Query: 361 DIVSLIDGIAFQTNILALNASVEAARAGSQGRGFAVVASEVRSLALRSAEAAREVKDLIA 420 +IVS+IDGIAFQTNILALNA+VEAARAG QG+GFAVVA EVRSLA RSA+AAREVKDLI Sbjct: 361 EIVSVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRSLAQRSAQAAREVKDLIE 420 Query: 421 ASIGSVDQAAQQVKEADQAIVQIVQSFGNVMTTVNEIAMATREQAEGISQVSLSLAEMDR 480 S +VD A+QV++A + + +IV S V + EI A+ EQ++GI Q++ ++ +MD Sbjct: 421 QSTTNVDSGAEQVRQAGETMQEIVTSVQRVTQIMAEITEASTEQSQGIDQINRAVTQMDD 480 Query: 481 ATQQNAALVEQTAAAADALTERAATLTASVAVFTLTA 517 TQQNAALVEQ AAAA +L ++A L + A F + A Sbjct: 481 VTQQNAALVEQAAAAASSLEDQAKRLATTAAFFKVPA 517 >gb|EGP45643.1| methyl-accepting chemotaxis protein I 2 [Achromobacter xylosoxidans AXX-A] Length = 538 Score = 316 bits (809), Expect = 8e-84, Method: Composition-based stats. Identities = 228/517 (44%), Positives = 329/517 (63%) Query: 1 MLNRMKLRTGLMLVLGLLTLALWLAAGMAWQGARSASRATVALIELSDRHIQPLHDTERL 60 ML +K+RTGL+ V+ + LAL A M W AR A A L ++ +PL++T+ L Sbjct: 1 MLKNLKIRTGLLAVMAIFVLALATATSMGWIYARDADVAVDDLNSVATEQTRPLYETQTL 60 Query: 61 FLNTLINMDNAYINLVKGDEIKSNDYSRRASAALQDARKAFDGYRQGLTPSALAEPEALR 120 L + + + AY+++V G ++ +A+ ALQ+ARK F Y++ + + Sbjct: 61 LLRSRLILVAAYLDIVSGKGSQAQGSVDQANQALQEARKRFAVYQRVPKNTEAGLKLSGE 120 Query: 121 VSAAYDSYIKVLNLREVALYDVSLEDYAAATVSAEAADREFAATLRAVIQHAEQVKDGLR 180 + + + +Y++ + E AL S E YAAA V +AD FA + + ++H E+ + Sbjct: 121 LDSVFTAYVRSIEALEAALQKQSAEGYAAAVVDTRSADARFAERVTSFLEHTERRSAAIN 180 Query: 181 LASERRSDQATLLAVAMLAASVLLIAICWLLFDRLLLQPLKRAADHFDRIADGDLSQAVQ 240 AS++R ++A L + MLA + L CW R +LQPLK AA HFDRIA GDL+Q V Sbjct: 181 AASDQRYERAELSTIIMLALAAALALGCWRFISRQVLQPLKDAATHFDRIASGDLTQRVA 240 Query: 241 GISGNEIGVLLAALQRMQHGVALTVGDIREATRDLHHGAADIAQGNGELAQRTQAQASTL 300 S NEIGVL AL+RMQ + TVG++R + +++ GAA+I+ GN L+ RT+ QA++L Sbjct: 241 VNSTNEIGVLFTALKRMQESLTRTVGEVRRSVIEINTGAAEISSGNTNLSARTEEQAASL 300 Query: 301 ETTAATLERLSGAVRNNAQNAERTNALAAAAASDAERGGQVMSGIAGAMAQVTAGAGRIS 360 E TAA++E L+ AV+ N ++A + N+LAA + A RGGQ + + MA+++ + RIS Sbjct: 301 EETAASMEELATAVKQNTEHAHQANSLAAESRGVALRGGQAVGQVVETMARISESSRRIS 360 Query: 361 DIVSLIDGIAFQTNILALNASVEAARAGSQGRGFAVVASEVRSLALRSAEAAREVKDLIA 420 +IVS+IDGIAFQTNILALNA+VEAARAG QG+GFAVVA EVR+LA RSA+AAREVKDLI Sbjct: 361 EIVSVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRTLAQRSAQAAREVKDLIE 420 Query: 421 ASIGSVDQAAQQVKEADQAIVQIVQSFGNVMTTVNEIAMATREQAEGISQVSLSLAEMDR 480 S +VD A+QV+ A + +IV S V + EI A+ EQ+ GI Q++ ++ +MD Sbjct: 421 QSSSNVDSGAEQVRAAGDTMQEIVDSVQRVTQIMAEITEASTEQSIGIDQINGAVTQMDD 480 Query: 481 ATQQNAALVEQTAAAADALTERAATLTASVAVFTLTA 517 TQQNAALVE+ AAAA +L ++A L A+ A F L A Sbjct: 481 VTQQNAALVEEAAAAASSLEDQAKRLAATAAFFKLPA 517 >gb|EFV82954.1| Tsr2 protein [Achromobacter xylosoxidans C54] Length = 538 Score = 306 bits (783), Expect = 9e-81, Method: Composition-based stats. Identities = 233/529 (44%), Positives = 328/529 (62%), Gaps = 7/529 (1%) Query: 1 MLNRMKLRTGLMLVLGLLTLALWLAAGMAWQGARSASRATVALIELSDRHIQPLHDTERL 60 ML +K+RTGL+ VL + LAL +A GM W A A A L ++ +PL+DT+ L Sbjct: 1 MLKNLKIRTGLLAVLAIFVLALAVATGMGWLYALDADTAVDDLNSVATEQTRPLYDTQTL 60 Query: 61 FLNTLINMDNAYINLVKGDEIKSNDYSRRASAALQDARKAFDGYRQGLTPSALAEPEALR 120 L + + + AY+++V G ++ +A+ L++ARK F Y+Q + A Sbjct: 61 LLRSRLTLVAAYLDIVSGKGSQAQGSIDQATQYLREARKRFAVYQQVPKNTEAGARLASE 120 Query: 121 VSAAYDSYIKVLNLREVALYDVSLEDYAAATVSAEAADREFAATLRAVIQHAEQVKDGLR 180 + + ++ Y++ + E AL S E YAAA AD F + ++H E+ + Sbjct: 121 LDSVFNGYVRSIETLEQALQKQSAEGYAAAVADTRGADARFVERVNGFLEHTERRSAAIN 180 Query: 181 LASERRSDQATLLAVAMLAASVLLIAICWLLFDRLLLQPLKRAADHFDRIADGDLSQAVQ 240 AS++R D+A L + MLA + +L CW R +LQPLK AA HFDRIA GDL+Q V Sbjct: 181 TASDQRYDRAELSTIIMLALAAVLALGCWRFISRQVLQPLKDAALHFDRIASGDLTQRVA 240 Query: 241 GISGNEIGVLLAALQRMQHGVALTVGDIREATRDLHHGAADIAQGNGELAQRTQAQASTL 300 S NEIGVL AL+RMQ + TV ++R + +++ GAA+IA GN L+ RT+ QA++L Sbjct: 241 VNSDNEIGVLFTALKRMQESLTRTVAEVRRSVTEINTGAAEIASGNTNLSSRTEEQAASL 300 Query: 301 ETTAATLERLSGAVRNNAQNAERTNALAAAAASDAERGGQVMSGIAGAMAQVTAGAGRIS 360 E TAA++E L+ AV+ N ++A + N LAA + A RGG + + MA+++ + RI+ Sbjct: 301 EETAASMEELATAVKQNTEHAHQANGLAAESRGVALRGGVAVGQVVETMARISESSRRIA 360 Query: 361 DIVSLIDGIAFQTNILALNASVEAARAGSQGRGFAVVASEVRSLALRSAEAAREVKDLIA 420 +IVS+IDGIAFQTNILALNA+VEAARAG QG+GFAVVA EVR+LA RSA+AAREVKDLI Sbjct: 361 EIVSVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRTLAQRSAQAAREVKDLIE 420 Query: 421 ASIGSVDQAAQQVKEADQAIVQIVQSFGNVMTTVNEIAMATREQAEGISQVSLSLAEMDR 480 S +VD AQQV+ A + +IV S V + EI A+ EQ+ GI Q++ ++ +MD Sbjct: 421 QSSSNVDNGAQQVRVAGDTMQEIVASVQRVTHIMAEITEASTEQSLGIDQINRAVTQMDD 480 Query: 481 ATQQNAALVEQTAAAADALTERAATLTASVAVFTLTA-------PQAMA 522 TQQNAALVE+ AAAA +L E+A L A+ A F L A PQA+A Sbjct: 481 VTQQNAALVEEAAAAAASLEEQAKRLAATAAFFKLPAETVIDVTPQAIA 529