BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3894.p (283 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776628.1| hypothetical protein Hsero_3239 [Herbaspiril... 452 e-125 ref|YP_586815.1| hypothetical protein Rmet_4684 [Cupriavidus met... 344 1e-92 ref|YP_001352615.1| hypothetical protein mma_0925 [Janthinobacte... 334 9e-90 ref|YP_002948134.1| protein of unknown function DUF692 [Variovor... 328 7e-88 ref|ZP_08406909.1| hypothetical protein HGR_13584 [Hylemonella g... 323 2e-86 >ref|YP_003776628.1| hypothetical protein Hsero_3239 [Herbaspirillum seropedicae SmR1] gb|ADJ64720.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 283 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 238/283 (84%), Positives = 250/283 (88%) Query: 1 MTTSPLTAGLGLKPQHFDAALACKAAGLWFEVHPENYLMDGGPRLAWLQAIREHHPVALH 60 MT L+AGLGLKPQHFDAAL C A GLWFEVHPENYLMDGGPRLAWLQAIREHHPVALH Sbjct: 1 MTAHLLSAGLGLKPQHFDAALDCTAPGLWFEVHPENYLMDGGPRLAWLQAIREHHPVALH 60 Query: 61 GVSMSLAGPDAPDPLHLRKLAQLVSRIEPVLVSEHLAWSRIGGHYLPDLLPVPRTNDTLA 120 GVS+SLAGPDAPDP+HLR+LAQL +RIEPVLVSEHLAWSR GGHYLPDLLPVPRT +TLA Sbjct: 61 GVSLSLAGPDAPDPVHLRQLAQLAARIEPVLVSEHLAWSRAGGHYLPDLLPVPRTTETLA 120 Query: 121 RLADNISRTQDVLQRRIALENPSHYLHMEQHSWSEPDFLRELVRRTGCGLLVDVNNVHVS 180 RLA NISRTQD L+RRIALENPSHYL M+QHSWSEP+FL ELVRRTGCGLLVDVNNVHVS Sbjct: 121 RLAANISRTQDGLKRRIALENPSHYLRMDQHSWSEPEFLHELVRRTGCGLLVDVNNVHVS 180 Query: 181 ACNLGTDAHHYLDQLPFDDILEIHLAGHSADASLPGLLVDSHDAPVAAAVWELYAHLLAR 240 ACNLG DA YLDQLP DDILEIHLAGHSADASLPGLLVDSHDAP+AA VW LY HLLAR Sbjct: 181 ACNLGIDARQYLDQLPVDDILEIHLAGHSADASLPGLLVDSHDAPIAAPVWALYQHLLAR 240 Query: 241 TGERPTLIERDGNVPTFDVLLAERNMAGTLLHPAAATHEEQAA 283 TG RPTLIERDGNVP F L+AER A TLL AA +EQ A Sbjct: 241 TGARPTLIERDGNVPAFKELMAERETAATLLQETAAAPQEQTA 283 >ref|YP_586815.1| hypothetical protein Rmet_4684 [Cupriavidus metallidurans CH34] gb|ABF11546.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 278 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 184/278 (66%), Positives = 209/278 (75%), Gaps = 2/278 (0%) Query: 1 MTTSPLTAGLGLKPQHFDAALACKAAGLWFEVHPENYLMDGGPRLAWLQAIREHHPVALH 60 MT +P AGLGLKPQHF+ AL C GLWFEVHPENYLM GGPRLAWL AIRE HPVALH Sbjct: 1 MTATP-RAGLGLKPQHFEQALQCAEPGLWFEVHPENYLMAGGPRLAWLTAIRERHPVALH 59 Query: 61 GVSMSLAGPDAPDPLHLRKLAQLVSRIEPVLVSEHLAWSRIGGHYLPDLLPVPRTNDTLA 120 GVS+SLAG PD HL +L L+ RIEPVLVSEHLAWS + G Y+PDLLPV RT LA Sbjct: 60 GVSLSLAGDAPPDEAHLDRLHALLRRIEPVLVSEHLAWSTLDGRYVPDLLPVARTTARLA 119 Query: 121 RLADNISRTQDVLQRRIALENPSHYLHMEQHSWSEPDFLRELVRRTGCGLLVDVNNVHVS 180 ++A NISR QD L IALENPSHYL M++H WSE DFL ELVRRTGCGLL+D+NNV+VS Sbjct: 120 KVAANISRVQDRLGCAIALENPSHYLRMDEHDWSETDFLAELVRRTGCGLLLDINNVYVS 179 Query: 181 ACNLGTDAHHYLDQLPFDDILEIHLAGHSADASL-PGLLVDSHDAPVAAAVWELYAHLLA 239 A N+G DA YL ++P + + EIHLAGHS D LL+DSHDAPVA AVW LY +A Sbjct: 180 ARNMGYDAWDYLTRVPAEAVREIHLAGHSFDDEFGASLLIDSHDAPVAEAVWSLYRRFVA 239 Query: 240 RTGERPTLIERDGNVPTFDVLLAERNMAGTLLHPAAAT 277 R GERPTLIERD N+P F LL ER+ A ++L AT Sbjct: 240 RVGERPTLIERDDNIPEFADLLDERDRAQSILDAEVAT 277 >ref|YP_001352615.1| hypothetical protein mma_0925 [Janthinobacterium sp. Marseille] gb|ABR91393.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 282 Score = 334 bits (857), Expect = 9e-90, Method: Composition-based stats. Identities = 165/271 (60%), Positives = 202/271 (74%) Query: 1 MTTSPLTAGLGLKPQHFDAALACKAAGLWFEVHPENYLMDGGPRLAWLQAIREHHPVALH 60 M L AGLGLK QH++ AL C GLWFEVHPENY++ GGPRL WL AIRE HP++LH Sbjct: 1 MNKPELGAGLGLKSQHYEEALNCADTGLWFEVHPENYMVAGGPRLRWLDAIRERHPISLH 60 Query: 61 GVSMSLAGPDAPDPLHLRKLAQLVSRIEPVLVSEHLAWSRIGGHYLPDLLPVPRTNDTLA 120 GVS+SLA P+ HL+KL++L++R EP LVSEHLAWS G HY PDLLP PRTN +LA Sbjct: 61 GVSLSLAADAPPNAEHLKKLSELINRTEPALVSEHLAWSAWGDHYYPDLLPFPRTNASLA 120 Query: 121 RLADNISRTQDVLQRRIALENPSHYLHMEQHSWSEPDFLRELVRRTGCGLLVDVNNVHVS 180 R+A NI RTQD L RRIA+ENP+HYL ++QH W E DFL ELV+RTGCGLL+DVNNV +S Sbjct: 121 RIAGNIERTQDRLGRRIAVENPTHYLRLDQHEWDEIDFLSELVKRTGCGLLLDVNNVFIS 180 Query: 181 ACNLGTDAHHYLDQLPFDDILEIHLAGHSADASLPGLLVDSHDAPVAAAVWELYAHLLAR 240 A NL DA YL+++P + ++EIHLAGH+ D + LL+DSHDA +A VW LY+ + R Sbjct: 181 ANNLQFDATQYLERVPGEAVMEIHLAGHNEDKNNTSLLIDSHDAAIAPDVWALYSVFIER 240 Query: 241 TGERPTLIERDGNVPTFDVLLAERNMAGTLL 271 G RPTLIERD ++P F VL ER A +L Sbjct: 241 IGSRPTLIERDDHIPAFSVLQKEREHAQDVL 271 >ref|YP_002948134.1| protein of unknown function DUF692 [Variovorax paradoxus S110] gb|ACS22868.1| protein of unknown function DUF692 [Variovorax paradoxus S110] Length = 280 Score = 328 bits (840), Expect = 7e-88, Method: Composition-based stats. Identities = 166/274 (60%), Positives = 203/274 (74%), Gaps = 1/274 (0%) Query: 3 TSPLTAGLGLKPQHFDAALACKAAGLWFEVHPENYLMDGGPRLAWLQAIREHHPVALHGV 62 + L AGLGLKP+H++AAL +A GLWFEVHPENY++ GGPR+ WL+AIR HPV+LHGV Sbjct: 2 SDTLAAGLGLKPEHYEAALGARAEGLWFEVHPENYMVAGGPRIGWLEAIRARHPVSLHGV 61 Query: 63 SMSLAGPDAPDPLHLRKLAQLVSRIEPVLVSEHLAWSRIGGHYLPDLLPVPRTNDTLARL 122 S+SLAG PD HL++LA L RI+P L+SEHLAWS G Y PDLLP PR+ L R+ Sbjct: 62 SLSLAGEAEPDAAHLQRLAALARRIQPALISEHLAWSTWNGQYFPDLLPFPRSTAALHRI 121 Query: 123 ADNISRTQDVLQRRIALENPSHYLHMEQHSWSEPDFLRELVRRTGCGLLVDVNNVHVSAC 182 A NI+RTQD L +A+ENPSHYLH++ H W E DFL EL RRTGC LL+D+NNV+VSAC Sbjct: 122 AGNIARTQDALGMAMAIENPSHYLHIDGHEWDEIDFLAELSRRTGCRLLLDINNVYVSAC 181 Query: 183 NLGTDAHHYLDQLPFDDILEIHLAGHSADASL-PGLLVDSHDAPVAAAVWELYAHLLART 241 NLG A ++D+ P + EIHLAGHSAD +L LL+DSHDAP+A VW+LY + R Sbjct: 182 NLGFSAADWIDRFPQALVGEIHLAGHSADPTLGDALLIDSHDAPIAPEVWQLYRRFVDRA 241 Query: 242 GERPTLIERDGNVPTFDVLLAERNMAGTLLHPAA 275 G RPTLIERDGNVP F L+AE+ A +L AA Sbjct: 242 GVRPTLIERDGNVPAFGELMAEQQQAAAVLQRAA 275 >ref|ZP_08406909.1| hypothetical protein HGR_13584 [Hylemonella gracilis ATCC 19624] gb|EGI75952.1| hypothetical protein HGR_13584 [Hylemonella gracilis ATCC 19624] Length = 293 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 174/274 (63%), Positives = 202/274 (73%), Gaps = 5/274 (1%) Query: 3 TSPLTAGLGLKPQHFDAALACKAAGLWFEVHPENYLMDGGPRLAWLQAIREHHPVALHGV 62 ++ L AGLGLKPQHF+ A GLWFEVHPENYLM+GGPRLAWLQA+R HP++LHGV Sbjct: 4 STGLGAGLGLKPQHFEEARDAHDPGLWFEVHPENYLMEGGPRLAWLQAVRARHPLSLHGV 63 Query: 63 SMSLAGPDAPDPLHLRKLAQLVSRIEPVLVSEHLAWSRIGGHYLPDLLPVPRTNDTLARL 122 S+SLA PD + L +LA+LV+R++P LVSEHLAWS GHY PDLLP PRT L R+ Sbjct: 64 SLSLAADAPPDLVQLAQLARLVARVQPSLVSEHLAWSTWNGHYHPDLLPFPRTQAALRRI 123 Query: 123 ADNISRTQDVLQRRIALENPSHYLHMEQHSWSEPDFLRELVRRTGCGLLVDVNNVHVSAC 182 A NI+R QD L RRIA+ENP+HYLH+E H W E DFL ELVRRTGCGLL+DVNNV V A Sbjct: 124 AGNIARVQDALGRRIAVENPAHYLHIEGHDWGETDFLSELVRRTGCGLLLDVNNVMVGAH 183 Query: 183 NLGTDAHHYLDQLPFDDILEIHLAGHSADAS---LPG--LLVDSHDAPVAAAVWELYAHL 237 NLG DA YLD P D ++EIHLAGH D S +PG LL+DSHDAPVA +VW LY L Sbjct: 184 NLGYDAQAYLDNFPTDAVMEIHLAGHRRDDSSVTVPGHELLIDSHDAPVAESVWALYERL 243 Query: 238 LARTGERPTLIERDGNVPTFDVLLAERNMAGTLL 271 +AR G RPTLIERD +P F LL E A L+ Sbjct: 244 VARIGPRPTLIERDDAIPPFAELLEEARRATHLM 277