BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3866.p         (140 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08198396.1| hypothetical protein NBCG_03556 [Nocardioidac...    71   6e-11
ref|ZP_07286870.1| conserved hypothetical protein [Streptomyces ...    67   8e-10
ref|YP_004802687.1| hypothetical protein SACTE_2253 [Streptomyce...    67   9e-10
ref|ZP_05001973.1| hypothetical protein SSAG_06351 [Streptomyces...    66   1e-09
ref|ZP_06710945.1| mucin-5AC [Streptomyces sp. e14] >gi|29283571...    66   2e-09

>ref|ZP_08198396.1| hypothetical protein NBCG_03556 [Nocardioidaceae bacterium Broad-1]
 gb|EGD42139.1| hypothetical protein NBCG_03556 [Nocardioidaceae bacterium Broad-1]
          Length = 131

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 2/102 (1%)

Query: 1   MKVIGLFKEVIPGANQTAAG--LTDIAGKLSKFEVISVLEYLKSGVAVFDVMGADRDPLN 58
           M+ +G F+E+ P       G  L D       +    VL YL+SG  + DVM +  DPL 
Sbjct: 1   MEFVGFFRELDPDGPSDIYGSRLADAVDGDVTYSRAEVLTYLESGYPILDVMESTPDPLE 60

Query: 59  QSVVISGAASLLSDGYWIWRLDLGYYVEKYQIQLDHDFLEQV 100
             + + G  SLL+DG W+WR DL +YV ++ + L   FL ++
Sbjct: 61  PDLSVRGGPSLLTDGLWVWRHDLAHYVRRHGVDLPEAFLRRM 102


>ref|ZP_07286870.1| conserved hypothetical protein [Streptomyces sp. C]
 gb|EFL15239.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 127

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 1/101 (0%)

Query: 1   MKVIGLFKEVIPGANQTAAG-LTDIAGKLSKFEVISVLEYLKSGVAVFDVMGADRDPLNQ 59
           MK++G + E+ P A  +  G + D   +  + +  ++L YL  G  +   MG+ +D L  
Sbjct: 1   MKILGFYAELWPPAAGSPEGSIEDFVRESPEPDEAAILRYLDDGCEILSFMGSVKDVLGS 60

Query: 60  SVVISGAASLLSDGYWIWRLDLGYYVEKYQIQLDHDFLEQV 100
              I G  ++L+DG W+WR DL YYV  Y + L  +FL+QV
Sbjct: 61  GERIVGGDNILTDGEWVWRGDLWYYVLTYHLALPAEFLQQV 101


>ref|YP_004802687.1| hypothetical protein SACTE_2253 [Streptomyces sp. SirexAA-E]
 gb|AEN10147.1| hypothetical protein SACTE_2253 [Streptomyces sp. SirexAA-E]
          Length = 127

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 1/101 (0%)

Query: 1   MKVIGLFKEV-IPGANQTAAGLTDIAGKLSKFEVISVLEYLKSGVAVFDVMGADRDPLNQ 59
           M++ G F+E+  P   +    +          +   + EYL +G  +F VMG+ +D L  
Sbjct: 1   MQIAGFFQELWAPSFGKPTGSIRSFTAPPPHEDAKKITEYLLAGHEIFSVMGSSKDVLGS 60

Query: 60  SVVISGAASLLSDGYWIWRLDLGYYVEKYQIQLDHDFLEQV 100
              + G  S+ SD  WIWR DL +YV  Y +QL  DFL +V
Sbjct: 61  EKTVLGGDSIFSDNEWIWRGDLWFYVWNYHVQLPEDFLARV 101


>ref|ZP_05001973.1| hypothetical protein SSAG_06351 [Streptomyces sp. Mg1]
 gb|EDX26484.1| hypothetical protein SSAG_06351 [Streptomyces sp. Mg1]
          Length = 141

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 1/102 (0%)

Query: 1   MKVIGLFKEVIPGANQT-AAGLTDIAGKLSKFEVISVLEYLKSGVAVFDVMGADRDPLNQ 59
           M+++G + E+ P         + D     + +    + +YL++G  +FD+M A RD +  
Sbjct: 1   MEMVGFYSEMQPEPRGVFHESIRDKVRSEAPYPKAEIRKYLEAGYPIFDIMEATRDVIGG 60

Query: 60  SVVISGAASLLSDGYWIWRLDLGYYVEKYQIQLDHDFLEQVA 101
           S  ++G +SLLSDG ++WR+DL  YV+ Y ++L  +FL   A
Sbjct: 61  SFTVAGGSSLLSDGRFVWRVDLPNYVDTYNLELPGEFLSFAA 102


>ref|ZP_06710945.1| mucin-5AC [Streptomyces sp. e14]
 gb|EFF94067.1| mucin-5AC [Streptomyces sp. e14]
          Length = 349

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 6/104 (5%)

Query: 1   MKVIGLFKEVIPGANQTAA----GLTDIAGKLSKFEVISVLEYLKSGVAVFDVMGADRDP 56
           +K  G ++E+  G   T A     L D A     ++   VL YL+S   ++  MGA RD 
Sbjct: 22  IKRAGFYREI--GGQATTAHDAPSLHDAARDSGPWDEDRVLAYLESAPEIYSTMGARRDV 79

Query: 57  LNQSVVISGAASLLSDGYWIWRLDLGYYVEKYQIQLDHDFLEQV 100
           L     I+GA SLL+DG W+W  DL +YV ++ + L  +FL+ +
Sbjct: 80  LTGDEWITGAGSLLTDGTWLWPTDLVHYVRRHHVALPPEFLDHI 123