BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3858.p (385 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776601.1| arabinose efflux permease [Herbaspirillum se... 609 e-172 ref|YP_368159.1| major facilitator transporter [Burkholderia sp.... 367 2e-99 ref|ZP_02378689.1| Major facilitator superfamily (MFS_1) transpo... 366 4e-99 ref|YP_620225.1| major facilitator transporter [Burkholderia cen... 365 7e-99 ref|YP_001118607.1| major facilitator transporter [Burkholderia ... 363 2e-98 >ref|YP_003776601.1| arabinose efflux permease [Herbaspirillum seropedicae SmR1] gb|ADJ64693.1| arabinose efflux permease protein [Herbaspirillum seropedicae SmR1] Length = 385 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 369/385 (95%), Positives = 375/385 (97%) Query: 1 MNWPLFALAVAAFGIGTTEFVIMGLLPDVALDLGVTAPAAGMLVSGYALGVAAGAPILAI 60 MNWPLFALAVAAFGIGTTEFVIMGLLPDVA DLGVTAPAAGMLVSGYALGVAAGAPILAI Sbjct: 1 MNWPLFALAVAAFGIGTTEFVIMGLLPDVARDLGVTAPAAGMLVSGYALGVAAGAPILAI 60 Query: 61 LTAKWPRKQALVGLMCLFILGNVLCALAPNYPFLMVARVVTAFCHAAFFGIGSVVAAELV 120 LTAKWPRKQALVGLMCLFILGNVLCALAPNY FLMVARVVTAFCHAAFFGIGSVVAAELV Sbjct: 61 LTAKWPRKQALVGLMCLFILGNVLCALAPNYVFLMVARVVTAFCHAAFFGIGSVVAAELV 120 Query: 121 TPQKRAQAVALMFTGLTVANILGVPLGTAFGHAAGWRSTFGVVTGIGVLAAVMLWTMLPK 180 PQKRAQAVALMFTGLTVANILGVPLGTAFGHAAGWRSTFG VT IGVLAA+MLWTMLPK Sbjct: 121 APQKRAQAVALMFTGLTVANILGVPLGTAFGHAAGWRSTFGAVTAIGVLAAIMLWTMLPK 180 Query: 181 KIPMQAGNIFQEFRSIIDTRVQLSLLTSTLASISMFSVITYIAYILLDVTGFSAREESWV 240 KIPMQAGNIFQEFRSIIDTRVQLSLLTSTLASISMFSVITYIAYILLDVTGF+ ++ESWV Sbjct: 181 KIPMQAGNIFQEFRSIIDTRVQLSLLTSTLASISMFSVITYIAYILLDVTGFTTQQESWV 240 Query: 241 LLLFGAGITVGGLVGGKLADWKLMPVMCGVFLCIAIVLGLFSFTSHYKWPTLATMFAWGA 300 LLLFGAGITVGGLVGGKLADWKLMPVMCGVFLCIA+VLGLFS TSHYKWPTLATMFAWGA Sbjct: 241 LLLFGAGITVGGLVGGKLADWKLMPVMCGVFLCIAVVLGLFSITSHYKWPTLATMFAWGA 300 Query: 301 FAFAVVPGAQIRVLDTARGAPNLASTLNQGAFNLGNATGAWVGGLAISAGLPLTDLPLIG 360 FAFAVVPGAQIRVLDTARGAPNLASTLNQGAFNLGNATGAWVGGLAISAGLPLTDLPLIG Sbjct: 301 FAFAVVPGAQIRVLDTARGAPNLASTLNQGAFNLGNATGAWVGGLAISAGLPLTDLPLIG 360 Query: 361 SVFALLGLVTVAVSASLDKRVRAPA 385 + FALLGL TVA SASLDKRVRAPA Sbjct: 361 AFFALLGLATVAFSASLDKRVRAPA 385 >ref|YP_368159.1| major facilitator transporter [Burkholderia sp. 383] gb|ABB07515.1| Major facilitator superfamily (MFS_1) transporter [Burkholderia sp. 383] Length = 389 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 241/380 (63%), Positives = 287/380 (75%) Query: 1 MNWPLFALAVAAFGIGTTEFVIMGLLPDVALDLGVTAPAAGMLVSGYALGVAAGAPILAI 60 M PLFALAVAAFGIGTTEFVIMGLLP+VA DLGV+ PAAGMLVSGYALGV GAPILAI Sbjct: 1 MPLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAI 60 Query: 61 LTAKWPRKQALVGLMCLFILGNVLCALAPNYPFLMVARVVTAFCHAAFFGIGSVVAAELV 120 +TAK PRK+AL+GL+ LFI GN+ CA+AP Y LM ARVVTAFCH AFFGIGSVVA+ LV Sbjct: 61 VTAKMPRKRALMGLIGLFIAGNLFCAIAPGYAVLMAARVVTAFCHGAFFGIGSVVASNLV 120 Query: 121 TPQKRAQAVALMFTGLTVANILGVPLGTAFGHAAGWRSTFGVVTGIGVLAAVMLWTMLPK 180 P +RAQA+ALMFTGLT+AN+LGVPLGTA G A GWR+TF VTGIG+ AA L LPK Sbjct: 121 APNRRAQAIALMFTGLTLANVLGVPLGTALGQAYGWRATFWAVTGIGIAAAAALAVCLPK 180 Query: 181 KIPMQAGNIFQEFRSIIDTRVQLSLLTSTLASISMFSVITYIAYILLDVTGFSAREESWV 240 + M +I +EF + +V + L S LAS S+FSV TYI IL DVTGFS R+ ++V Sbjct: 181 NLAMPDTSITREFSVLKHPQVLMVLGISVLASASLFSVFTYITPILEDVTGFSPRQVTYV 240 Query: 241 LLLFGAGITVGGLVGGKLADWKLMPVMCGVFLCIAIVLGLFSFTSHYKWPTLATMFAWGA 300 LLLFG G+TVGG +GGKLADW+ MP + I ++L LF+ T H + LAT+F WG Sbjct: 241 LLLFGLGLTVGGTLGGKLADWRRMPSLIATLALIGVILALFAGTMHLPFAALATIFVWGI 300 Query: 301 FAFAVVPGAQIRVLDTARGAPNLASTLNQGAFNLGNATGAWVGGLAISAGLPLTDLPLIG 360 AFA+VP QI ++D A APNLASTLNQGAFNLGNATGAW+GG+AI +G+ L +LP +G Sbjct: 301 LAFAIVPPLQILIVDRASDAPNLASTLNQGAFNLGNATGAWLGGMAIGSGVSLVNLPWVG 360 Query: 361 SVFALLGLVTVAVSASLDKR 380 A+ L SASL++R Sbjct: 361 IAMAVAALALTLWSASLERR 380 >ref|ZP_02378689.1| Major facilitator superfamily (MFS_1) transporter [Burkholderia ubonensis Bu] Length = 389 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 244/380 (64%), Positives = 286/380 (75%) Query: 1 MNWPLFALAVAAFGIGTTEFVIMGLLPDVALDLGVTAPAAGMLVSGYALGVAAGAPILAI 60 M PLFALAVAAFGIGTTEFVIMGLLPDVA DLGV+ PAAGMLVSGYALGV GAPILA+ Sbjct: 1 MPLPLFALAVAAFGIGTTEFVIMGLLPDVARDLGVSIPAAGMLVSGYALGVTIGAPILAV 60 Query: 61 LTAKWPRKQALVGLMCLFILGNVLCALAPNYPFLMVARVVTAFCHAAFFGIGSVVAAELV 120 +TAK PRK+AL+GL+ LFI GN+ CA+AP Y LM ARVVTAFCH AFFGIGSVVA+ LV Sbjct: 61 VTAKMPRKRALMGLIGLFIAGNLFCAIAPGYTVLMAARVVTAFCHGAFFGIGSVVASNLV 120 Query: 121 TPQKRAQAVALMFTGLTVANILGVPLGTAFGHAAGWRSTFGVVTGIGVLAAVMLWTMLPK 180 P +RAQA+ALMFTGLT+AN+LGVPLGTA G A GWR+TF VTGIGV AA L LP+ Sbjct: 121 APNRRAQAIALMFTGLTLANVLGVPLGTALGQAFGWRATFWAVTGIGVAAAAALAVCLPR 180 Query: 181 KIPMQAGNIFQEFRSIIDTRVQLSLLTSTLASISMFSVITYIAYILLDVTGFSAREESWV 240 + M +I +EF + +V + L S LAS S+FSV TYI IL DVTGFS R+ ++V Sbjct: 181 NLAMPDTSITREFSVLKHPQVLMVLGISVLASASLFSVFTYITPILEDVTGFSPRQVTYV 240 Query: 241 LLLFGAGITVGGLVGGKLADWKLMPVMCGVFLCIAIVLGLFSFTSHYKWPTLATMFAWGA 300 LLLFG G+TVGG +GGKLADW+ MP + I +VL LF+ T H + LAT+F WG Sbjct: 241 LLLFGLGLTVGGTLGGKLADWRRMPSLIASLALIGVVLALFAGTMHVPFAALATIFVWGM 300 Query: 301 FAFAVVPGAQIRVLDTARGAPNLASTLNQGAFNLGNATGAWVGGLAISAGLPLTDLPLIG 360 AFA+VP QI ++D A APNLASTLNQGAFNLGNATGAW+GG AI AG+PL LP +G Sbjct: 301 LAFAIVPPLQILIVDRASDAPNLASTLNQGAFNLGNATGAWLGGTAIGAGIPLVSLPWVG 360 Query: 361 SVFALLGLVTVAVSASLDKR 380 A+ L SASL++R Sbjct: 361 VAMAVAALALTLWSASLERR 380 >ref|YP_620225.1| major facilitator transporter [Burkholderia cenocepacia AU 1054] ref|YP_834469.1| major facilitator transporter [Burkholderia cenocepacia HI2424] gb|ABF75252.1| major facilitator superfamily MFS_1 [Burkholderia cenocepacia AU 1054] gb|ABK07576.1| major facilitator superfamily MFS_1 [Burkholderia cenocepacia HI2424] Length = 389 Score = 365 bits (937), Expect = 7e-99, Method: Composition-based stats. Identities = 242/380 (63%), Positives = 285/380 (75%) Query: 1 MNWPLFALAVAAFGIGTTEFVIMGLLPDVALDLGVTAPAAGMLVSGYALGVAAGAPILAI 60 M PLFALAVAAFGIGTTEFVIMGLLP+VA DLGV+ PAAGMLVSGYALGV GAPILAI Sbjct: 1 MPLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAI 60 Query: 61 LTAKWPRKQALVGLMCLFILGNVLCALAPNYPFLMVARVVTAFCHAAFFGIGSVVAAELV 120 +TAK PRK+AL+ L+ LFI GN+ CA+AP Y LM ARVVTAFCH AFFGIGSVVA+ LV Sbjct: 61 VTAKMPRKRALMSLIGLFIAGNLFCAIAPGYAVLMAARVVTAFCHGAFFGIGSVVASNLV 120 Query: 121 TPQKRAQAVALMFTGLTVANILGVPLGTAFGHAAGWRSTFGVVTGIGVLAAVMLWTMLPK 180 P +RAQA+ALMFTGLT+AN+LGVPLGTA G A GWR+TF VTGIG+ AA L LPK Sbjct: 121 APNRRAQAIALMFTGLTLANVLGVPLGTALGQALGWRATFWAVTGIGIAAAAALAVCLPK 180 Query: 181 KIPMQAGNIFQEFRSIIDTRVQLSLLTSTLASISMFSVITYIAYILLDVTGFSAREESWV 240 + M +I +EF + +V + L S LAS S+FSV TYI IL DVTGFS R+ ++V Sbjct: 181 NLAMPDTSITREFSVLKHPQVLMVLGISVLASASLFSVFTYITPILEDVTGFSPRQVTYV 240 Query: 241 LLLFGAGITVGGLVGGKLADWKLMPVMCGVFLCIAIVLGLFSFTSHYKWPTLATMFAWGA 300 LLLFG G+TVGG +GGKLADW+ MP + I IVL LF+ T H + LAT+F WG Sbjct: 241 LLLFGLGLTVGGTLGGKLADWRRMPSLIATLALIGIVLALFAGTMHLPFAALATIFVWGI 300 Query: 301 FAFAVVPGAQIRVLDTARGAPNLASTLNQGAFNLGNATGAWVGGLAISAGLPLTDLPLIG 360 AFA+VP QI ++D A APNLASTLNQGAFNLGNATGAW+GG+AI +G+ L LP +G Sbjct: 301 LAFAIVPPLQIMIVDRASDAPNLASTLNQGAFNLGNATGAWLGGMAIGSGVSLVSLPWVG 360 Query: 361 SVFALLGLVTVAVSASLDKR 380 A+ L SASL++R Sbjct: 361 VAMAIAALALTLWSASLERR 380 >ref|YP_001118607.1| major facilitator transporter [Burkholderia vietnamiensis G4] gb|ABO53772.1| major facilitator superfamily MFS_1 [Burkholderia vietnamiensis G4] Length = 389 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 247/386 (63%), Positives = 289/386 (74%), Gaps = 1/386 (0%) Query: 1 MNWPLFALAVAAFGIGTTEFVIMGLLPDVALDLGVTAPAAGMLVSGYALGVAAGAPILAI 60 M PLFALAVAAFGIGTTEFVIMGLLP+VA DLGV+ PAAGMLVSGYALGV GAPILA+ Sbjct: 1 MPLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAV 60 Query: 61 LTAKWPRKQALVGLMCLFILGNVLCALAPNYPFLMVARVVTAFCHAAFFGIGSVVAAELV 120 +TAK PRK+AL+GL+ LFI GN+LCALAP Y LM ARVVTAFCH AFFGIGSVVA+ LV Sbjct: 61 VTAKMPRKRALMGLIGLFIAGNLLCALAPGYAVLMAARVVTAFCHGAFFGIGSVVASSLV 120 Query: 121 TPQKRAQAVALMFTGLTVANILGVPLGTAFGHAAGWRSTFGVVTGIGVLAAVMLWTMLPK 180 P +RAQA+ALMFTGLT+AN+LGVPLGTA G A GWR+TF VTGIG+ AA L LPK Sbjct: 121 APNRRAQAIALMFTGLTLANVLGVPLGTALGQAYGWRATFWAVTGIGIAAAAALAVCLPK 180 Query: 181 KIPMQAGNIFQEFRSIIDTRVQLSLLTSTLASISMFSVITYIAYILLDVTGFSAREESWV 240 + M +I +EF + +V + L S LAS S+FSV TYI IL DVT FS + ++V Sbjct: 181 HLAMPDTSITREFGVLRHPQVLMVLGISVLASASLFSVFTYITPILEDVTRFSPHQVTYV 240 Query: 241 LLLFGAGITVGGLVGGKLADWKLMPVMCGVFLCIAIVLGLFSFTSHYKWPTLATMFAWGA 300 LLLFG G+TVGG +GG+LADW+ MP + I IVL LF+ T H + LAT+F WG Sbjct: 241 LLLFGLGLTVGGTLGGRLADWRRMPSLIATLALIGIVLALFAGTMHVPFAALATIFVWGV 300 Query: 301 FAFAVVPGAQIRVLDTARGAPNLASTLNQGAFNLGNATGAWVGGLAISAGLPLTDLPLIG 360 AFA+VP QI ++D A APNLASTLNQGAFNLGNATGAW+GG AI AG+PL LP +G Sbjct: 301 LAFAIVPPLQILIVDRASDAPNLASTLNQGAFNLGNATGAWLGGAAIGAGVPLVSLPWVG 360 Query: 361 SVFALLGLVTVAVSASLDKR-VRAPA 385 A+ L SASL++R RAPA Sbjct: 361 VAMAVAALALTLWSASLERRPARAPA 386