BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3847.p (264 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08273384.1| Heavy-metal-associated domain and membrane-bo... 226 3e-57 emb|CAL61806.2| conserved hypothetical protein; putative membran... 225 4e-57 ref|YP_001099931.1| hypothetical protein HEAR1649 [Herminiimonas... 217 2e-54 ref|YP_003776596.1| hypothetical protein Hsero_3206 [Herbaspiril... 216 2e-54 ref|YP_001353318.1| hypothetical protein mma_1628 [Janthinobacte... 190 2e-46 >ref|ZP_08273384.1| Heavy-metal-associated domain and membrane-bounded cytochrome biogenesis cycZ-like domain, membrane copper tolerance protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33149.1| Heavy-metal-associated domain and membrane-bounded cytochrome biogenesis cycZ-like domain, membrane copper tolerance protein [Oxalobacteraceae bacterium IMCC9480] Length = 249 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 151/254 (59%), Positives = 186/254 (73%), Gaps = 10/254 (3%) Query: 8 LSLIPVFMIGLLGSVHCIGMCGGIIGAFSMAPASVRAKPFPVAVSVMNSKANGALLLRTL 67 LSL+P F+IGLLGSVHC+GMCGGI+ A S+APA A+PFPVAV + LLR L Sbjct: 4 LSLLPFFVIGLLGSVHCVGMCGGIVAALSVAPA---ARPFPVAVM---AAVPADRLLRVL 57 Query: 68 SYNLGRIGSYAVAGALAGGLAGGARLLAGMQAWQAGIHVLAQLMLVALGLYLMDAWRGLA 127 SYN GRIGSYA+AGA+ GG+A GAR+L G+ +Q + LA LMLVALGLYL AW+GLA Sbjct: 58 SYNAGRIGSYAIAGAVMGGVANGARMLTGVSTFQLVGYWLANLMLVALGLYLTGAWQGLA 117 Query: 128 RTETVGNILWQRLRPLTDLLLPLDSPFKLVLAGGLWGWLPCGMVYSALLTALMAGSAVQG 187 R E++G LW+ + PLT LLPLDSP K+ GGLWGWLPCGMVYS LLTA++ GSA+ G Sbjct: 118 RIESLGQALWKHIEPLTRRLLPLDSPLKMFAMGGLWGWLPCGMVYSVLLTAMLTGSALSG 177 Query: 188 ALTMLAFGAGTLPVLLVAGMSGARLRQLAARPWVRRSAGVIVLAFGLLGLLRAAEIGGLG 247 A MLAFG GTLP LLV G+ G +LR + R VR ++GV+VLAFGLLGL RA+ G Sbjct: 178 ASVMLAFGLGTLPTLLVMGLLGTQLRAVMQRRGVRIASGVLVLAFGLLGLWRASH----G 233 Query: 248 IARGWIDVFCVSPV 261 + W+D C++P+ Sbjct: 234 MPGSWLDAICITPI 247 >emb|CAL61806.2| conserved hypothetical protein; putative membrane protein [Herminiimonas arsenicoxydans] Length = 266 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 153/263 (58%), Positives = 183/263 (69%), Gaps = 9/263 (3%) Query: 8 LSLIPVFMIGLLGSVHCIGMCGGIIGAFSMAPASVRAKPFPVAVSVMNSKANGALL---- 63 L+L P+FMIGLLG +HCIGMCGGI+ A S A A +PFPVAV + +NG Sbjct: 4 LNLFPIFMIGLLGGLHCIGMCGGIVSALSAAQAP---RPFPVAVVAAETMSNGMQTAAFD 60 Query: 64 --LRTLSYNLGRIGSYAVAGALAGGLAGGARLLAGMQAWQAGIHVLAQLMLVALGLYLMD 121 LR +YN GRIGSYAVAGAL GGLA G R A + Q G + LA LML+ LGLYLMD Sbjct: 61 NALRVTAYNAGRIGSYAVAGALVGGLADGMRSFANLAMLQVGGYWLANLMLIVLGLYLMD 120 Query: 122 AWRGLARTETVGNILWQRLRPLTDLLLPLDSPFKLVLAGGLWGWLPCGMVYSALLTALMA 181 AWRGLAR E VG ILW+R++PL LLP+D+ K GGLWGWLPCGMVYS LLTA+ + Sbjct: 121 AWRGLARLEAVGQILWRRVQPLMKFLLPMDNLGKAFALGGLWGWLPCGMVYSVLLTAMFS 180 Query: 182 GSAVQGALTMLAFGAGTLPVLLVAGMSGARLRQLAARPWVRRSAGVIVLAFGLLGLLRAA 241 GSA+ GAL MLAFG GTLP +L G+ G RLR LA + VR + G+IVLAFG+LGL+RAA Sbjct: 181 GSALSGALVMLAFGLGTLPAMLSLGLVGVRLRMLAQKRKVRIACGLIVLAFGVLGLVRAA 240 Query: 242 EIGGLGIARGWIDVFCVSPVHGG 264 I+ G +DVFC++P G Sbjct: 241 GGLSGDISGGLLDVFCITPQAAG 263 >ref|YP_001099931.1| hypothetical protein HEAR1649 [Herminiimonas arsenicoxydans] Length = 256 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 149/256 (58%), Positives = 177/256 (69%), Gaps = 9/256 (3%) Query: 15 MIGLLGSVHCIGMCGGIIGAFSMAPASVRAKPFPVAVSVMNSKANGALL------LRTLS 68 MIGLLG +HCIGMCGGI+ A S A A +PFPVAV + +NG LR + Sbjct: 1 MIGLLGGLHCIGMCGGIVSALSAAQAP---RPFPVAVVAAETMSNGMQTAAFDNALRVTA 57 Query: 69 YNLGRIGSYAVAGALAGGLAGGARLLAGMQAWQAGIHVLAQLMLVALGLYLMDAWRGLAR 128 YN GRIGSYAVAGAL GGLA G R A + Q G + LA LML+ LGLYLMDAWRGLAR Sbjct: 58 YNAGRIGSYAVAGALVGGLADGMRSFANLAMLQVGGYWLANLMLIVLGLYLMDAWRGLAR 117 Query: 129 TETVGNILWQRLRPLTDLLLPLDSPFKLVLAGGLWGWLPCGMVYSALLTALMAGSAVQGA 188 E VG ILW+R++PL LLP+D+ K GGLWGWLPCGMVYS LLTA+ +GSA+ GA Sbjct: 118 LEAVGQILWRRVQPLMKFLLPMDNLGKAFALGGLWGWLPCGMVYSVLLTAMFSGSALSGA 177 Query: 189 LTMLAFGAGTLPVLLVAGMSGARLRQLAARPWVRRSAGVIVLAFGLLGLLRAAEIGGLGI 248 L MLAFG GTLP +L G+ G RLR LA + VR + G+IVLAFG+LGL+RAA I Sbjct: 178 LVMLAFGLGTLPAMLSLGLVGVRLRMLAQKRKVRIACGLIVLAFGVLGLVRAAGGLSGDI 237 Query: 249 ARGWIDVFCVSPVHGG 264 + G +DVFC++P G Sbjct: 238 SGGLLDVFCITPQAAG 253 >ref|YP_003776596.1| hypothetical protein Hsero_3206 [Herbaspirillum seropedicae SmR1] gb|ADJ64688.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 284 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 166/285 (58%), Positives = 201/285 (70%), Gaps = 29/285 (10%) Query: 8 LSLIPVFMIGLLGSVHCIGMCGGIIGAFSMAPASVRAKPFPVA----------------- 50 ++L+P+F++GL+GSVHCIGMCGGI+GA S A A VR P P A Sbjct: 1 MNLLPIFLVGLMGSVHCIGMCGGIVGALSSA-APVRPTPTPAAPLLSVAAPGRNDGARLL 59 Query: 51 -------VSVMNSKANGALLLRTLSYNLGRIGSYAVAGALAGGLAG----GARLLAGMQA 99 + +A L+R L YNLGR+ SYA+AGALAGG+A GA +L + Sbjct: 60 RIIPIHPAGGVQVQAMAQDLVRVLCYNLGRLSSYALAGALAGGIAAGLLRGADVLGWLAP 119 Query: 100 WQAGIHVLAQLMLVALGLYLMDAWRGLARTETVGNILWQRLRPLTDLLLPLDSPFKLVLA 159 Q +++ ++LV LGLYL W LAR E G+ LW R+RPL L+P+D+P K +L Sbjct: 120 AQRVAYLITNIVLVLLGLYLTQWWPALARLEQWGSALWVRVRPLAARLVPVDTPAKALLL 179 Query: 160 GGLWGWLPCGMVYSALLTALMAGSAVQGALTMLAFGAGTLPVLLVAGMSGARLRQLAARP 219 G LWGWLPCGMVYSALLTALMAGSA+QGALTMLAFGAGTLPVLL AG+SGARLRQLA RP Sbjct: 180 GSLWGWLPCGMVYSALLTALMAGSAMQGALTMLAFGAGTLPVLLAAGLSGARLRQLAQRP 239 Query: 220 WVRRSAGVIVLAFGLLGLLRAAEIGGLGIARGWIDVFCVSPVHGG 264 VR +AGV+VLAFG++GLLR AEIGG+GIARGWIDVFC+SP HGG Sbjct: 240 AVRLAAGVVVLAFGIMGLLRGAEIGGMGIARGWIDVFCISPAHGG 284 >ref|YP_001353318.1| hypothetical protein mma_1628 [Janthinobacterium sp. Marseille] gb|ABR90177.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 257 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 149/256 (58%), Positives = 179/256 (69%), Gaps = 4/256 (1%) Query: 8 LSLIPVFMIGLLGSVHCIGMCGGIIGAFSMAPASVRAKPFPVAVSVMNSKANGALLLRTL 67 +SLIP FM+GLLGS+HC+GMCGGI+ AFS A R P V S A L+ L Sbjct: 4 ISLIPFFMLGLLGSLHCVGMCGGIVSAFSAASRPQRPFPAVVVTIPTVSPAVYRDALQVL 63 Query: 68 SYNLGRIGSYAVAGALAGGLAGGARLLAGMQAWQAGIHVLAQLMLVALGLYLMDAWRGLA 127 +YN GRIGSYAVAGA+ GG+AGG L+G+ A Q G + LA MLV LGLYLMDAWRGLA Sbjct: 64 AYNAGRIGSYAVAGAIVGGIAGGVHSLSGVAALQVGGYWLANGMLVVLGLYLMDAWRGLA 123 Query: 128 RTETVGNILWQRLRPLTDLLLPLDSPFKLVLAGGLWGWLPCGMVYSALLTALMAGSAVQG 187 R E G LW RLRPL LLP+D+ K GGLWGWLPCGMVYS LLTA+ +GSA+ G Sbjct: 124 RLEQAGQFLWSRLRPLMKPLLPMDTVGKAFALGGLWGWLPCGMVYSVLLTAMFSGSALSG 183 Query: 188 ALTMLAFGAGTLPVLLVAGMSGARLRQLAARPWVRRSAGVIVLAFGLLGLLRAAEIGGLG 247 A MLAFG GTLP LL G+ G RLR+LA + VR + G+IVLAFG+LGLLRAA + Sbjct: 184 ASVMLAFGLGTLPALLGLGLLGTRLRELARQRSVRIACGLIVLAFGVLGLLRAAGV---- 239 Query: 248 IARGWIDVFCVSPVHG 263 ++ GW+D+ C++P G Sbjct: 240 LSNGWLDILCITPQAG 255